New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620116NA (NA)17 (0.130) 10/166 NT 100% coding (925/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620152 0 (0.000)coding (961/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCC  >  NC_000913/3620053‑3620251
                                                                                                   |                                                                                                   
tgcATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCG                                                                                                     >  1:308393‑M2/2‑100 (MQ=255)
                                              cGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGaactggcggtaaattctccgggtattccgggtcgtgcgtccgccac                                                       <  2:1952021‑M2/100‑47 (MQ=255)
                                                      ttACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgg                                                <  1:1800236‑M2/100‑55 (MQ=255)
                                                      ttACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCC‑‑‑‑CGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgg                                          <  2:2720763‑M2/100‑60 (MQ=255)
                                                        aCCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacaga                                             <  2:2845239‑M2/100‑57 (MQ=255)
                                                          cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacg                                           <  2:2167284‑M2/100‑59 (MQ=255)
                                                          cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacg                                           <  2:2757045‑M2/100‑59 (MQ=255)
                                                           tGCCGCGCCGCTGGTGCGCTATGGCTTGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgg                                          <  2:367412‑M2/100‑60 (MQ=255)
                                                           tGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCggtaaattctccgggtcttccgggtcgtgcgtcagccacacggcagacagacggatgcc                                           <  1:2722618‑M2/100‑60 (MQ=255)
                                                           tGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgg                                          <  2:1908066‑M2/100‑60 (MQ=255)
                                                            gccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgga                                         <  2:1301785‑M2/100‑61 (MQ=255)
                                                            gccgcgccgaTGGTGCGCTATGGCTGGACGCCACGCGGCGcggccggtaaattctccgggtattccgggccgtgcgtcagccacacggcagacaggcgga                                         <  1:490851‑M2/100‑61 (MQ=255)
                                                             ccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggat                                        <  1:3188887‑M2/100‑62 (MQ=255)
                                                              cgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatg                                       <  1:1286448‑M2/100‑63 (MQ=255)
                                                               gcgccgcTGGTGCGCTATGGCTGGACGCCCCGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgc                                      <  2:2468912‑M2/100‑64 (MQ=255)
                                                               gcgccgcTGGTGCGCTATGGCTGGACGCCCCGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgc                                      <  1:2925172‑M2/100‑64 (MQ=255)
                                                                cgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgcc                                     <  2:2333171‑M2/100‑65 (MQ=255)
                                                                  ccgcTGGTGCGCTATGGCTGGACGCCACGCGGCCcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgt                                   <  1:2105554‑M2/100‑67 (MQ=255)
                                                                                         cacccgcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccccaccgccgacagacggatgccgttgtcccggccatattcggtgtaa            <  1:2443933‑M2/96‑90 (MQ=255)
                                                                                            caggggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacc          >  1:2205797‑M2/5‑8 (MQ=255)
                                                                                              gcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccgg       >  2:3327388‑M2/1‑6 (MQ=255)
                                                                                              gcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccgg       <  2:289163‑M2/100‑95 (MQ=255)
                                                                                              gcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccgg       >  2:2879188‑M2/1‑6 (MQ=255)
                                                                                              gcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccgg       <  2:2251408‑M2/100‑95 (MQ=255)
                                                                                              gcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccgg       >  1:1354976‑M2/1‑6 (MQ=255)
                                                                                               cggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc      <  2:3670926‑M2/100‑96 (MQ=255)
                                                                                               cggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc      <  2:3067298‑M2/100‑96 (MQ=255)
                                                                                               cggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc      >  2:1261651‑M2/1‑5 (MQ=255)
                                                                                               cggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc      <  2:1677758‑M2/100‑96 (MQ=255)
                                                                                               cggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc      >  2:3722502‑M2/1‑5 (MQ=255)
                                                                                               cggcgcggcaggtaaatcctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc      >  2:1603721‑M2/1‑5 (MQ=255)
                                                                                               cagcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc      >  1:2309650‑M2/3‑5 (MQ=255)
                                                                                                ggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggca     <  2:268277‑M2/100‑97 (MQ=255)
                                                                                                ggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggca     >  2:505688‑M2/1‑4 (MQ=255)
                                                                                                ggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggca     <  2:221252‑M2/100‑97 (MQ=255)
                                                                                                ggcgcggcaggtaaattctccggggattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggca     >  1:1470168‑M2/1‑4 (MQ=255)
                                                                                                 gcgcggcaggtaagttctccgggtattccggggcgtgcgtcagccacacggcagacagacggacgccgttgccccggccatctgcggtgtaacccggca     >  1:2972743‑M2/1‑3 (MQ=255)
                                                                                                 gcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcag    >  2:1719169‑M2/1‑3 (MQ=255)
                                                                                                 gcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcag    >  2:2453192‑M2/1‑3 (MQ=255)
                                                                                                 gcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcag    >  1:2240536‑M2/1‑3 (MQ=255)
                                                                                                 gcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcag    >  1:2749381‑M2/1‑3 (MQ=255)
                                                                                                 gcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcag    >  2:1073027‑M2/1‑3 (MQ=255)
                                                                                                  cgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcagg   >  2:1015647‑M2/1‑2 (MQ=255)
                                                                                                  cgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcagg   >  2:3119642‑M2/1‑2 (MQ=255)
                                                                                                  cgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcagg   >  2:209454‑M2/1‑2 (MQ=255)
                                                                                                  cgcggcagataaattctccgggtattccgggtcgtgcgtcagccacacgggagacagacggacgccggtgtcccggccatattcggtgtaacccggcagg   >  1:1053383‑M2/1‑2 (MQ=255)
                                                                                                  cGAACTGGCGGTGGTGTATGGCCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGC   >  2:1772070‑M2/1‑100 (MQ=255)
                                                                                                  cGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGC   >  2:1214659‑M2/1‑100 (MQ=255)
                                                                                                  cGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGC   <  2:2981988‑M2/100‑1 (MQ=255)
                                                                                                   gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg  >  2:1230997‑M2/1‑1 (MQ=255)
                                                                                                   gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg  >  2:2467300‑M2/1‑1 (MQ=255)
                                                                                                   gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg  <  1:3663646‑M2/100‑100 (MQ=255)
                                                                                                   gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg  >  1:1475416‑M2/1‑1 (MQ=255)
                                                                                                   gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg  >  2:379265‑M2/1‑1 (MQ=255)
                                                                                                   gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg  >  2:37999‑M2/1‑1 (MQ=255)
                                                                                                   gAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCC  >  1:1189342‑M2/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCC  >  NC_000913/3620053‑3620251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.