| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4210001 | NA (NA) | 25 (0.190) | 7/170 | NT | 17.4% | intergenic (+152/‑42) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon |
| ? | NC_000913 | = 4210039 | 124 (0.920) | intergenic (+190/‑4) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon | |||||
CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGcaac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4209903‑4210001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAG < NC_000913/4210039‑4209937 cttccgatcTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGC < 2:1805467/91‑1CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGC < 1:3404976/100‑1CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGC < 1:1543899/100‑1CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGC < 2:2707994/100‑1 gtGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 1:2082432/98‑1 GGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 1:22471/100‑1 GGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 1:2712293/100‑1 GGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCA < 2:1891248/100‑1 GGGTGAGGTTTGAGATATTTGCTCTTTAAGAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAATTTGTTCGTGAGGCTCTCAAATTTTCGCA > 1:3633366/1‑100 GGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAA > 2:2733962/1‑100 GGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAA > 2:2353288/1‑100 GGTGATGTTTGAGATATTTGCTCTTTAAAAAGCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAA < 2:2150380/100‑1 GTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAAC > 2:1071680/1‑100 GTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAAC > 1:2885933/1‑100 GTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAAC > 2:3233435/1‑100 GTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAA > 2:1807723/1‑100 TTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAgatcggaag > 1:1805458/1‑91 ATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGTTTCTTGCGATCCATCATCG < 1:1364338/100‑1 TCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGT < 1:1593345/100‑1 GATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTG < 2:2103891/100‑1 GATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGTTTCTTTCGATTCATCATCGTGTTG < 2:1516186/100‑1 ATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGC < 2:2192485/100‑1 ATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGC < 1:1807714/100‑1 ATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGC < 2:3273727/100‑1 TCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGCG < 1:3743771/100‑1 TCAAGATGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCG < 2:1092756/100‑1 aatCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGCGTCTCTCCAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAA < 1:2575768/97‑1 AAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAA < 1:2385283/100‑1 GCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAA < 1:385597/100‑1 CTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAAT < 2:552132/100‑1 TGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGCGAAAATT < 2:3584713/100‑1 TGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATT < 2:646837/100‑1 GAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATT < 1:3145576/99‑1 atgcgaagggCACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAGCCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTG < 1:284090/90‑1 AAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTG < 2:472103/100‑1 AAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGA < 2:977048/100‑1 AAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGA < 2:2116035/100‑1 AATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCACAACCCGAAGATGTTTCTTGCGATCCATCATCGTGTTGCGAAAATTTGAG < 2:2375463/100‑1 AATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAG < 1:88050/100‑1 AATTGAAACACTGAACAACGAAAGTTGTTCGGGAGTCTCTCAAATTTTCGGAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGA < 1:1483555/99‑1 GTTCGTGAGTCTCTCAATTTTTCACAATCCTAAGATGTTTCTGTCGATTCATCATCGTGTTGCGACAATTTGAGAGACTCACGAACAACTTTCGTTGTTC < 1:3540319/100‑1 TCAAATTTTCACAGCCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTT < 1:2989331/100‑1 CAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATC > 2:205287/1‑100 CAACCCGAAGATGTTTCTTACGATTCATCATCGTCTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTGTCAGCTTGATC < 1:2005690/100‑1 ACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCA < 2:1561243/100‑1 ACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCA > 1:3342960/1‑100 CCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAG > 1:1715198/1‑100 CCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAG < 2:88825/100‑1 CGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGcaac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4209903‑4210001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAG < NC_000913/4210039‑4209937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |