| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 303617 = | 122 (0.900) | 19 (0.160) | 11/152 | NT | 16.7% | intergenic (+12/+236) | yagU/ykgJ | DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein |
| ? | NC_000913 | 303650 = | 85 (0.740) | intergenic (+45/+203) | yagU/ykgJ | DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein | |||||
GGATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/303728‑303617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccatttttatAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAG > NC_000913/303650‑303747 GGATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTG > 1:1172329/1‑100GGATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTG < 2:301909/100‑1GGATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTG < 1:3774321/100‑1 GATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGC > 2:307723/1‑100 GATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGC < 1:3239369/100‑1 ATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCG < 2:735719/100‑1 ATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCG < 2:2884302/100‑1 ATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCG < 2:805858/100‑1 TCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGC < 1:1352035/100‑1 CTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCC < 2:2419416/100‑1 TACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCA > 2:2861097/1‑100 TACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCA > 2:2859494/1‑100 TACATCATCCTGAAGTAGCGCGATATACTCACTGACTATATGCGCCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGGTGTATTTGCGCCA > 2:2720314/1‑100 ACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCAT < 2:1744715/100‑1 ACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCAT > 2:785158/1‑100 CATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATT < 2:1348439/100‑1 CATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATT < 2:2643661/100‑1 ATCATCCTGAAGTAGCGCGATAAACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTT > 1:2215858/1‑100 TCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTT > 2:1815526/1‑100 TCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTT > 2:1845089/1‑100 CATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTT < 1:34136/100‑1 ATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTA < 2:1105704/100‑1 ATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTA > 2:3423529/1‑100 ATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTA < 2:3527274/100‑1 ATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTA < 1:1446928/100‑1 TCCTGAAGTAGCGCGATATACTCACTGACTATCTTCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTAT < 2:315792/100‑1 TCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTAT > 2:2873308/1‑100 TCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTAT > 2:937533/1‑100 nGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAACGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTAT > 1:1473353/2‑97 TTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTAC > 1:2822457/1‑100 TTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTAC > 2:2425485/1‑100 ACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATCTTCTTATGCAGATAGTCAGTGAGTATTTCCCGCTACT > 1:301538/1‑98 CCTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCA > 2:1047279/1‑100 CCTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCA > 1:1741307/1‑100 CCTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCA > 2:2924256/1‑100 CCTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCA > 1:3677584/1‑100 CCTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCA > 1:95767/1‑100 CTATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAG > 1:192503/1‑100 TATAAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGG > 2:1387314/1‑100 AAAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATG > 2:2099738/1‑100 AAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTTATGCAGATAGTCAGTGAGTATATTGCGCTACTTCAGGATGA > 1:618709/1‑100 AAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGA > 2:2390328/1‑100 AAAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGA > 1:333808/1‑100 AAATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGAT > 1:3760916/1‑100 AATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATG > 2:110299/1‑100 AATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATG > 2:3060531/1‑100 ATGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGAT > 2:1737946/1‑98 TGGCGCTGTATTTGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTA > 2:624690/1‑100 GCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCT > 1:3719560/1‑100 GCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCT < 2:360736/100‑1 GCCATTTTTATAGGATAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGGGAGTATATCGCGCTACTTCAGGATGATCTAGATCCGAAGAACGCT < 1:2485034/100‑1 CCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTA > 1:134738/1‑100 CCATTTTTATAGGTTAAAAAAATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTAGCTCGCGCTACTTCAGGATGATGTAGATCCGAAGAAAGCca > 1:3171913/1‑98 CATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAGGAATCCTAC > 1:3240851/1‑100 CATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTAC < 1:3054549/100‑1 CATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTAC > 1:1396648/1‑100 CATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGAATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTAC > 1:2439797/1‑100 ATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACA > 1:2930671/1‑100 TTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGA < 2:6402/100‑1 TTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAG < 1:2459467/100‑1 TTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAG > 1:3737731/1‑100 TATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGA > 2:3194578/1‑100 ATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAG > 1:2911773/1‑100 GGATCTACATCATCCTGAAGTAGCGCGATATACTCACTGACTATCTGCATCAGAATATAAAAAGCAATGTTTTTAACCTATAAAAATGGCGCTGTATTTGCGCCATTTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/303728‑303617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccatttttatAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAG > NC_000913/303650‑303747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |