BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	303617 =	122 (0.900)	19 (0.160)	11/152	NT	16.7%	intergenic (+12/+236)	yagU/ykgJ	DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein
*	?	NC_000913	303650 =	85 (0.740)	19 (0.160)	11/152	NT	16.7%	intergenic (+45/+203)	yagU/ykgJ	DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein

Only 100 of 172 total aligned reads displayed.

TGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGA  >  NC_000913/303519‑303716

ctcttctgtagcgttcttcggatctacatcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctat                                                                                                    >  1:2911773‑M1/99‑100 (MQ=255)

 ggtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATa                                                                                                   >  2:3461364/1‑100 (MQ=255)

  gtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGACAGTCCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATaa                                                                                                  <  1:3303545/100‑1 (MQ=255)

    tctgtagcgttcttcggatctacatcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATaaaa                                                                                                <  2:6402‑M1/6‑1 (MQ=255)

       gtaggattcctcggatctacatcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATg                                                                                             >  1:3240851‑M1/92‑100 (MQ=255)

       gtagcgttcttcggatctacatcatcctgaagtagcgcgatattctcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATg                                                                                             >  1:2439797‑M1/92‑100 (MQ=255)

        tggctttcttcggatctacatcatcctgaagtagcgcgagctactcactgactatctgcatcagaatataaaaagcaatttttttaacctATAAAAATgg                                                                                            >  1:3171913‑M1/91‑100 (MQ=255)

        tagcgttcttcggatctacatcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATgg                                                                                            >  1:134738‑M1/91‑100 (MQ=255)

         gAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGgc                                                                                           <  1:1496422/100‑1 (MQ=255)

         gAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGACTCAAACAGATAATGCATTGAATGATAAAAATgg                                                                                            >  1:705214/1‑99 (MQ=255)

         agcgttcttcggatctagatcatcctgaagtagcgcgatatactccctgactatctgcatcagaatataaaaagcaatgtttttatcctATAAAAATGgc                                                                                           <  1:2485034‑M1/11‑1 (MQ=255)

         agcgttcttcggatctacatcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGgc                                                                                           >  1:3719560‑M1/90‑100 (MQ=255)

         agcgttcttcggatctacatcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGgc                                                                                           <  2:360736‑M1/11‑1 (MQ=255)

          aaaTTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGgcg                                                                                          <  1:1912925/100‑1 (MQ=255)

            attattCGCAGAGATTTACGAAACAGAATTACTCATTAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCa                                                                                        >  1:2720300/1‑100 (MQ=255)

            attattCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCa                                                                                        <  2:2256161/100‑1 (MQ=255)

            attattCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCa                                                                                        <  2:2949284/100‑1 (MQ=255)

                ttCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATa                                                                                    >  1:3436184/1‑100 (MQ=255)

                 tCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCACATTAGTCTCAAGAAGATAAAGCATTGAATGATAAAAATGGCGCAAacac                                                                                   >  1:3563062/1‑100 (MQ=255)

                    cAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGGGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgc                                                                                >  1:2629941/1‑100 (MQ=255)

                    cAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgc                                                                                <  1:335425/100‑1 (MQ=255)

                    cAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgc                                                                                >  2:2284324/1‑100 (MQ=255)

                    cAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgc                                                                                >  2:724628/1‑100 (MQ=255)

                     agagATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcg                                                                               <  2:1171834/100‑1 (MQ=255)

                      gagaTTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTACAGGCGCAAACAGATACTGACTTGAATGATAAAAATGGAGCAAATACAacgc                                                                              >  1:1330715/1‑100 (MQ=255)

                          catcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCAtt                                                                          >  2:3060531‑M1/73‑100 (MQ=255)

                           atcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCAttt                                                                         >  1:3760916‑M1/72‑100 (MQ=255)

                           atcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCAt                                                                           >  2:1737946‑M1/72‑98 (MQ=255)

                            tcatcctgaagtagcgcaatatactcactgactatctgcataagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCAtttt                                                                        >  1:618709‑M1/71‑100 (MQ=255)

                             aCGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCAttttt                                                                       >  1:3806801/1‑100 (MQ=255)

                              cGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTta                                                                      <  1:463757/100‑1 (MQ=255)

                              cGAAACAGAATTACTCATGAGCCAGACCCGGAGATCCCTTTAGGCCCAAACAGATAATGCATTGACTGATAAAAATAGCGCAAATACAGCGCCATTTTta                                                                      >  1:276714/1‑100 (MQ=255)

                               gAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtat                                                                     <  2:2794765/100‑1 (MQ=255)

                               gAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtat                                                                     >  1:2408025/1‑100 (MQ=255)

                                cctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTtata                                                                    >  2:1387314‑M1/67‑100 (MQ=255)

                                aaaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtata                                                                    <  1:397180/100‑1 (MQ=255)

                                aaaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtata                                                                    >  1:3621929/1‑100 (MQ=255)

                                 ctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAg                                                                   >  1:192503‑M1/66‑100 (MQ=255)

                                 aaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAg                                                                   <  1:686850/100‑1 (MQ=255)

                                  tgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAgg                                                                  >  1:1741307‑M1/65‑100 (MQ=255)

                                  tgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAgg                                                                  >  2:2924256‑M1/65‑100 (MQ=255)

                                   cAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGt                                                                 >  1:2386493/1‑100 (MQ=255)

                                     gAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTa                                                               >  1:3140350/1‑100 (MQ=255)

                                     agtagcgggaaatactcactgactatctgcataagaagataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGt                                                                 >  1:301538‑M1/62‑98 (MQ=255)

                                      gtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTaa                                                              >  1:2822457‑M1/61‑100 (MQ=255)

                                      gtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTaa                                                              >  2:2425485‑M1/61‑100 (MQ=255)

                                      aaTTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTaa                                                              <  2:3767826/100‑1 (MQ=255)

                                       aTTACTCATGAGCCAGACCCTGAGATCACTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTaaa                                                             <  2:1897886/100‑1 (MQ=255)

                                        ttACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCTCAAATACAGCGCCATTTTTATAGGTTa                                                               >  1:2263289/1‑97 (MQ=255)

                                          aCTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAAc                                                          <  2:224980/100‑1 (MQ=255)

                                             cATGAGCCAGACCCTGAGATCCGTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACAtt                                                       <  1:1079704/100‑1 (MQ=255)

                                              aTGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTg                                                      >  1:3500946/1‑100 (MQ=255)

                                              aTGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTg                                                      >  2:1405535/1‑100 (MQ=255)

                                               tGAGGCAGAGCCTGAGATTCTTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACAtt                                                       <  1:339630/98‑1 (MQ=255)

                                               tGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGc                                                     <  2:793691/100‑1 (MQ=255)

                                                naGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGc                                                     >  1:1126460/2‑99 (MQ=255)

                                                 aGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAATAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCtt                                                   <  1:976678/100‑1 (MQ=255)

                                                 aGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCtt                                                   >  2:671998/1‑100 (MQ=255)

                                                  gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttt                                                  >  1:2873294/1‑100 (MQ=255)

                                                  gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttt                                                  >  1:307718/1‑100 (MQ=255)

                                                    cAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt                                                >  2:75355/1‑100 (MQ=255)

                                                    cAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt                                                <  2:1908400/100‑1 (MQ=255)

                                                        cccTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTtata                                             <  2:3360766/99‑1 (MQ=255)

                                                          cTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTc                                          >  2:60804/1‑100 (MQ=255)

                                                             agaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGa                                       <  2:3234610/100‑1 (MQ=255)

                                                              gaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGAt                                      >  2:1122678/1‑100 (MQ=255)

                                                              gaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGAt                                      >  1:792229/1‑100 (MQ=255)

                                                                tCCGTTTAGGCTCAAACAGATAAGGCATTGAATGATAAAAAGGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGAt                                      <  1:3578883/98‑1 (MQ=255)

                                                                tCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGc                                    >  1:3414516/1‑100 (MQ=255)

                                                                 ccttttAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGc                                    <  1:3023929/96‑1 (MQ=255)

                                                                 cccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCa                                   <  2:3806096/100‑1 (MQ=255)

                                                                  ccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATGCAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGAtn                                     <  2:868917/97‑2 (MQ=255)

                                                                  ccTTTAGGCGCAAACAAATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCa                                   <  1:2249179/99‑1 (MQ=255)

                                                                   ttatAGGCTCAAACAGATGATGCATCGAATGATTAAAATGCCGCAAATACAGAGCCATTTTTATAGGATAAAAACAATGTatattatattat                                         >  1:2189610/4‑90 (MQ=255)

                                                                   cTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGa                                 >  2:1084629/1‑100 (MQ=255)

                                                                   cTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGa                                 >  2:1539061/1‑100 (MQ=255)

                                                                    tttAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGAt                                <  1:3145359/100‑1 (MQ=255)

                                                                     ttAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGACGCAGATa                               <  2:1929798/100‑1 (MQ=255)

                                                                      tAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATATGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAg                              <  1:2033431/100‑1 (MQ=255)

                                                                      tAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAg                              <  2:69165/100‑1 (MQ=255)

                                                                          cTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAg                          <  1:3272421/100‑1 (MQ=255)

                                                                          cTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAg                          >  2:1049221/1‑100 (MQ=255)

                                                                             aaaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTg                        <  2:1867696/99‑1 (MQ=255)

                                                                              aaCAGATAGTGCATGGAATGAAAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTg                        <  2:276719/98‑1 (MQ=255)

                                                                              aaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAg                      <  1:1037053/100‑1 (MQ=255)

                                                                               aCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGt                     <  2:3806826/100‑1 (MQ=255)

                                                                                cAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGta                    >  2:2460887/1‑100 (MQ=255)

                                                                                cAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGta                    <  2:1782197/100‑1 (MQ=255)

                                                                                  gATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGtata                  >  1:885591/1‑100 (MQ=255)

                                                                                    tAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATc                >  2:2416029/1‑100 (MQ=255)

                                                                                     aaTGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATCTTCTGATGCAGATAGTCAGTGAGTATATcg               >  1:933117/1‑100 (MQ=255)

                                                                                       tGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATcgcg             >  2:231345/1‑100 (MQ=255)

                                                                                        gCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCgcgc            >  2:2100821/1‑100 (MQ=255)

                                                                                           ttGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTAc         <  1:2904336/100‑1 (MQ=255)

                                                                                            tGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACt        >  1:1845080/1‑100 (MQ=255)

                                                                                                tGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAg    >  1:2701600/1‑100 (MQ=255)

                                                                                                tGATAAAAATGGAGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAg    <  1:1897518/100‑1 (MQ=255)

                                                                                                  ATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACGTTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTtcn     >  1:1473353‑M1/1‑96 (MQ=255)

                                                                                                  ATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGga  >  2:937533‑M1/1‑100 (MQ=255)

                                                                                                  ATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGAAGATAGTCAGTGAGTATATCGCGCTACTTCAGga  <  2:315792‑M1/100‑1 (MQ=255)

TGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGA  >  NC_000913/303519‑303716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.