| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 570701 | 129 (0.950) | 22 (0.180) | 7/164 | NT | 15.8% | intergenic (+273/‑192) | ybcK/ybcL | DLP12 prophage; putative recombinase/inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein |
| ? | NC_000913 | = 570711 | 116 (0.930) | intergenic (+283/‑182) | ybcK/ybcL | DLP12 prophage; putative recombinase/inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein | |||||
TGAGAACTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/570596‑570701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacaccTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAATCT < NC_000913/570711‑570613 TGAGAACTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAAT < 1:1090258/100‑1TGAGAACTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAAT > 2:3364929/1‑100TGAGAACTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAAT > 2:1381133/1‑100TGAGAACTCTTGGTCGCAGATTCAAATACTGAAAATACGTAACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAAT < 1:320680/100‑1 AGAACTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATA < 2:774677/99‑1 GAACTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAAC > 1:1493086/1‑100 AACTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACA > 1:1004173/1‑100 CTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACC > 1:1462703/1‑100 CTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACC < 1:2943278/100‑1 ATACTGAAATTACTTTACAAATTATTATAATCAAAATGGTGTATGTCACGTATTTTGAATGGTATGTTAAAAAATAACACCTACGAAAGTCGGTGTTATT < 1:3055068/100‑1 ATACTGAAAATAGGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTTAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATT < 1:3148553/100‑1 ATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATT < 1:2017826/100‑1 TACTTAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGGCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTT < 1:3465637/100‑1 TACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTT < 2:1112745/100‑1 TACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTT < 2:677403/100‑1 TACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTT < 2:3009940/100‑1 CTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTT < 1:3327326/100‑1 CTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTT < 2:3373438/100‑1 CTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTT < 1:1816558/100‑1 CTGAAAATACGTGACAAATTATTATGAGCAAAATAGTGTATGGCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTT < 1:2671037/100‑1 TGAAAATACGTGCCAAATTATTATGAGCAAAATGATGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCAACGAAAGTCGGTGTTATTTTTn < 1:3265223/100‑2 TGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTTT < 1:3671729/100‑1 TGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTTT < 1:2179595/100‑1 TGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTTT < 2:2109674/100‑1 TGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTTT < 2:3163661/100‑1 TGAAAATACGTGACAAATTATTATGACCAAAATGGTCTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTTT < 2:341389/100‑1 GAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTTTA < 2:1576127/100‑1 AAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTTTAAC < 2:2853043/100‑1 AAATACGTGACAAATTATTATAAGCAAAAAGGTATATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAATGTCGGTGTTATTTTTTAAC < 1:1296047/100‑1 AATACGTAACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACCTACGAAAGTCGGTGTTATTTTTTA < 1:1831767/97‑1 TTAAAAAATAACACCGACTTTCGTAGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTT > 2:1657274/1‑100 TAACACCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTT < 1:3339960/100‑1 AACACCTACGAAAGTCGGTGTTATTTTTTATCCTACCATTCAAATTACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTG < 1:773110/100‑1 AACACCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTG < 2:2390015/100‑1 AACACCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTG > 2:371528/1‑100 AACACCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTG < 1:743795/100‑1 CACCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAA > 2:3084012/1‑100 CACCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAA > 2:3433471/1‑100 CACCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAA > 2:3785012/1‑100 CACCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAA > 2:575032/1‑100 CCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAATC > 2:1248450/1‑100 CCTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAATC < 2:802168/100‑1 CTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACCCCATTTTGCTCATAATAATTTGACACGTATTTTCAGTATTTGAATCT > 2:952896/1‑100 CTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAATCT > 1:137025/1‑100 TGAGAACTCTTGGTCGCAGATTCAAATACTGAAAATACGTGACAAATTATTATGAGCAAAATGGTGTATGTCACGTATTTTGAATGGTAGGTTAAAAAATAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/570596‑570701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacaccTACGAAAGTCGGTGTTATTTTTTAACCTACCATTCAAAATACGTGACATACACCATTTTGCTCATAATAATTTGTCACGTATTTTCAGTATTTGAATCT < NC_000913/570711‑570613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |