Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,293,033 IS1 (+) +9 bp 100% intergenic (‑111/‑486) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1050545NA (NA)110 (0.810) 73/178 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1293033 = 0 (0.000)intergenic (‑111/‑494) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 12930410 (0.000)110 (0.810) 71/178 NT 100% intergenic (‑119/‑486) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 123 total aligned reads displayed.

CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1050447‑1050545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACT  >  NC_000913/1293033‑1293131
                                                                                                                                                                                                      
CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCT                                                                                                    <  2:2522678/100‑1
CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCT                                                                                                    <  2:1646673/100‑1
 GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTG                                                                                                   >  2:976521/1‑100
 GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTG                                                                                                   <  1:675385/100‑1
 GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAAAACTATCAATAAGTTGGAGCCATTACCTG                                                                                                   >  1:2636510/1‑100
  GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGT                                                                                                  >  2:79159/1‑100
     GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCC                                                                                               >  2:2359210/1‑100
      TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCG                                                                                              <  1:3297404/100‑1
       CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGC                                                                                             >  2:458726/1‑100
        GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCC                                                                                            <  1:3672778/100‑1
        GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCC                                                                                            <  2:1622181/100‑1
        GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCC                                                                                            <  2:1620398/100‑1
             CGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAA                                                                                       >  2:3527556/1‑100
               TTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAAT                                                                                     <  2:3341623/100‑1
                 CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATAT                                                                                   >  2:3564652/1‑100
                  TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATC                                                                                  >  1:654283/1‑100
                   CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCT                                                                                 >  2:2767619/1‑100
                    cAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTAACTGTGCCGCCAATAAATATCTT                                                                                >  1:390667/2‑100
                      AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTT                                                                              >  2:3425104/1‑100
                        TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCA                                                                            <  1:534330/100‑1
                         CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCAT                                                                           <  2:2048690/100‑1
                          GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATA                                                                          >  1:667613/1‑100
                            TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAA                                                                        <  2:2916105/100‑1
                            TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAA                                                                         >  2:713700/1‑99
                             GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAA                                                                       >  2:2801664/1‑100
                              GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAAT                                                                      <  2:3291727/100‑1
                              GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAAT                                                                      <  2:3711987/100‑1
                               AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATT                                                                     >  2:1883007/1‑100
                                GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTA                                                                    <  2:1268351/100‑1
                                 CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAG                                                                   >  2:2125134/1‑100
                                  TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATCTCTTTTCATAAAATTAG                                                                   >  2:3641380/1‑99
                                  TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC                                                                  <  2:920949/100‑1
                                   GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC                                                                 >  1:2137804/1‑100
                                    CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTAATAAAATTAGCCA                                                                >  1:1853209/1‑100
                                      TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGA                                                              >  1:2493964/1‑100
                                      TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATGACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGA                                                              >  1:2672302/1‑100
                                       GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAA                                                             >  2:1190766/1‑100
                                        ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAA                                                            >  1:2712428/1‑100
                                         CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAA                                                           >  2:3334027/1‑100
                                            AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAC                                                        <  2:2080425/100‑1
                                            AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAC                                                        <  2:3486663/100‑1
                                              TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGC                                                      >  2:1336614/1‑100
                                               CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCG                                                     >  1:231194/1‑100
                                                ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGG                                                    <  1:3251825/100‑1
                                                 TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGcc                                                   <  2:3545593/100‑3
                                                  CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCA                                                  <  2:3739637/100‑1
                                                     GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATAT                                               >  1:2512868/1‑100
                                                      CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATA                                              >  2:1630065/1‑100
                                                       ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAG                                             >  2:3281395/1‑100
                                                         TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC                                           <  2:2117356/100‑1
                                                          ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCC                                          <  2:2636025/100‑1
                                                           TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCT                                         >  2:354507/1‑100
                                                           TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCT                                         >  2:3166739/1‑100
                                                              GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATn                                      <  1:3112088/100‑2
                                                              GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATT                                      <  1:1816678/100‑1
                                                              GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATT                                      >  1:2238430/1‑100
                                                              GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATT                                      <  1:629134/100‑1
                                                              GAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATT                                      <  2:2666401/100‑1
                                                                ACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTA                                    <  1:3540985/100‑1
                                                                ACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTA                                    >  2:1364549/1‑100
                                                                ACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTA                                    >  2:2799856/1‑100
                                                                   TAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC                                 <  2:69146/100‑1
                                                                    AAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC                                <  2:2890938/100‑1
                                                                     AAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATATCCCTATTTACACCG                               >  1:1763820/1‑100
                                                                      AACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGA                              >  2:3271079/1‑100
                                                                         ACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGA                           >  1:1973973/1‑100
                                                                          CTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAT                          >  1:830831/1‑100
                                                                           TATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATT                         >  1:80537/1‑100
                                                                           TATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATT                         <  1:2813369/100‑1
                                                                            ATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAAGATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTT                        <  1:979722/100‑1
                                                                             TCAATAAGTTGGAGTCATTACCTGTGCCGCCAATGAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCCATTTACGCCGGTGATTTC                       <  1:1997190/100‑1
                                                                             TCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTATCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTC                       >  1:1661149/1‑100
                                                                             TCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTC                       <  2:482406/100‑1
                                                                              CAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG                      <  1:2801650/100‑1
                                                                               AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC                     >  1:136681/1‑100
                                                                                ATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCA                    >  1:3406543/1‑100
                                                                                ATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCA                    >  1:3562189/1‑100
                                                                                 TAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAG                   <  2:1932626/100‑1
                                                                                  AAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGC                  <  2:2987621/100‑1
                                                                                  AAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGC                  <  2:3758932/100‑1
                                                                                  AAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGC                  <  2:34896/100‑1
                                                                                   AGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCA                 >  1:1736508/1‑100
                                                                                   AGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCA                 >  2:968194/1‑100
                                                                                   AGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCAGAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAG                   <  1:2914670/98‑1
                                                                                         AGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAG           <  2:1625915/100‑1
                                                                                          GTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGG          >  2:22380/1‑100
                                                                                          GTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGG          >  1:1951275/1‑100
                                                                                          GTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGG          >  1:114675/1‑100
                                                                                           TCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGT         <  2:2981832/100‑1
                                                                                            CATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGag        >  1:1562156/1‑98
                                                                                            CATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTT        >  2:827441/1‑100
                                                                                            CATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTT        >  1:136267/1‑100
                                                                                             ATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTA       <  1:968187/100‑1
                                                                                              TTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAACCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAA      >  1:2356929/1‑100
                                                                                               TACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAA     >  1:103188/1‑100
                                                                                               TACCTGTGCCGCAAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAA     <  2:875682/100‑1
                                                                                                ACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCATATTTACACCGATGATTTCGCAGCAAGTGAGGTTAAA     >  2:2611593/1‑99
                                                                                                 CCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAAC   <  1:1336606/100‑1
                                                                                                  CTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACT  <  2:2977580/100‑1
                                                                                                  CTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACT  <  1:2081921/100‑1
                                                                                                                                                                                                      
CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1050447‑1050545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACT  >  NC_000913/1293033‑1293131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.