New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2729452NA (NA)13 (0.110) 6/158 NT NA intergenic (‑8/+164) gltW/rrsG tRNA‑Glu/16S ribosomal RNA of rrnG operon
?NC_000913 = 2729474 NA (NA)intergenic (‑30/+142) gltW/rrsG tRNA‑Glu/16S ribosomal RNA of rrnG operon

AGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTC  >  NC_000913/2729432‑2729529
                    |                                                                             
atacggaagggACACGAAAATTGCTTATCACGCGTTGGGTGTTATTTTCGTGTAGGGGGCGTTTTCATTTATTCATAGCTCTCGGGCTTATTCTCTTc  <  1:445395/90‑1 (MQ=0)
                    |                                                                             
AGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTC  >  NC_000913/2729432‑2729529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.