BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4235376 =	NA (NA)	13 (0.110) +TCGTCGAT	8/162	NT	NA	coding (1619/1650 nt)	pgi	glucosephosphate isomerase
*	?	NC_000913	4285300 =	NA (NA)	13 (0.110) +TCGTCGAT	8/162	NT	NA	intergenic (‑87/+113)	yjcH/acs	DUF485 family inner membrane protein/acetyl‑CoA synthetase

Only 100 of 209 total aligned reads displayed.

AGTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC  >  NC_000913/4235277‑4235475

aGTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCt                                                                                                     >  2:2534376/1‑100 (MQ=255)

aGTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCt                                                                                                     <  2:1377248/100‑1 (MQ=255)

aGTGGGGCGTGGAACTGGGTAAACAGATGGCGAACCGTCTTCTACCAGAGAAGAAAGATGATACAGCACTCAGCAGCCACGATAGCTCGACCAAAGGTCt                                                                                                     <  1:316472/100‑1 (MQ=255)

   ggggCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGAt                                                                                                  <  2:806851/100‑1 (MQ=255)

    gggCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGCGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGAGCAATGGTCTGAtt                                                                                                 >  1:474406/1‑100 (MQ=255)

    gggCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGAtt                                                                                                 >  1:164506/1‑100 (MQ=255)

     ggCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTa                                                                                                >  2:3517425/1‑100 (MQ=255)

        gTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGAGGATAACGAAATCAGAAGCCACGATAGCTCGACCAATAGTCTGATTAAcc                                                                                             >  1:3379026/1‑100 (MQ=255)

         tGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCg                                                                                            >  1:3619285/1‑100 (MQ=255)

         tGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCg                                                                                            <  1:2803375/100‑1 (MQ=255)

           gAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCt                                                                                          >  1:800632/1‑100 (MQ=255)

               tGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATaa                                                                                      >  1:1453301/1‑100 (MQ=255)

                gggTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATaaa                                                                                     >  2:3168503/1‑100 (MQ=255)

                 ggTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAg                                                                                    >  2:54851/1‑100 (MQ=255)

                 ggTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGAAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAg                                                                                    >  1:2442358/1‑100 (MQ=255)

                  gTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGc                                                                                   <  1:1912317/100‑1 (MQ=255)

                    aaaCAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGt                                                                                 <  1:1212363/100‑1 (MQ=255)

                         gCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGgcgc                                                                            >  1:2986804/1‑100 (MQ=255)

                          cTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGcgcg                                                                           <  2:508746/100‑1 (MQ=255)

                           tGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCgg                                                                          <  2:3378826/100‑1 (MQ=255)

                             cgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacaaTGATTAACCGCTATAAAGCGTGGCGCGGtt                                                                        >  1:3161462‑M1/71‑100 (MQ=255)

                               accgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTaa                                                                      >  2:3612395‑M1/69‑100 (MQ=255)

                                ccgcgtcgcatcaggcatcggttgtcggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAat                                                                     >  2:202323‑M1/68‑100 (MQ=255)

                                 aCCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatc                                                                    >  2:404188/1‑100 (MQ=255)

                                 aCCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatc                                                                    <  1:969317/100‑1 (MQ=255)

                                  gcgtcgcatcaggcatcggttgcctgatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAat                                                                     >  1:775772‑M1/66‑98 (MQ=255)

                                  gcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAatca                                                                   >  1:1187726‑M1/66‑100 (MQ=255)

                                    gTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc                                                                 >  2:465387/1‑100 (MQ=255)

                                    gTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc                                                                 <  2:3583677/100‑1 (MQ=255)

                                    gTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcat                                                                  >  1:1494716/1‑99 (MQ=255)

                                       tgcTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc                                                              <  2:1967316/98‑1 (MQ=255)

                                          tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGat                                                           >  1:2246596/1‑100 (MQ=255)

                                          tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAACTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGat                                                           >  2:843895/1‑100 (MQ=255)

                                           gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                          >  2:444176/1‑100 (MQ=255)

                                           gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                          >  2:2288234/1‑100 (MQ=255)

                                           gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                          >  1:3113564/1‑100 (MQ=255)

                                             cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATg                                                        >  1:3716303/1‑100 (MQ=255)

                                             cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATg                                                        >  2:1096414/1‑100 (MQ=255)

                                              agagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGt                                                       >  1:632371/1‑100 (MQ=255)

                                               gagCTGAAAGATGATAAAGAAATCAGCAGCCACGGTAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGCCGATATg                                                        >  1:3654609/1‑98 (MQ=255)

                                               gagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTa                                                      <  1:1348478/100‑1 (MQ=255)

                                                 gCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg                                                    >  2:334001/1‑100 (MQ=255)

                                                  cTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGc                                                   >  2:1632072/1‑100 (MQ=255)

                                                    gAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCg                                                 >  1:69628/1‑100 (MQ=255)

                                                     aaaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg                                                <  2:906307/100‑1 (MQ=255)

                                                       aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                              >  1:71914/1‑100 (MQ=255)

                                                       aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                              >  1:3470500/1‑100 (MQ=255)

                                                       aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                              <  2:1221068/100‑1 (MQ=255)

                                                       aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                              <  2:1799547/100‑1 (MQ=255)

                                                           gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                          >  2:414714/1‑100 (MQ=255)

                                                            atAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGc                                         <  2:2487085/100‑1 (MQ=255)

                                                             tgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                        >  2:2643544‑M1/39‑100 (MQ=255)

                                                             tacggcgtaaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTCGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                        >  2:2328048‑M1/39‑100 (MQ=255)

                                                             tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                        >  2:3244394/1‑100 (MQ=255)

                                                             tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                        >  2:1868512/1‑100 (MQ=255)

                                                             tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                        >  2:3120859/1‑100 (MQ=255)

                                                              aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                        >  2:1544627/1‑99 (MQ=255)

                                                              aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                       >  1:54200/1‑100 (MQ=255)

                                                              aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                       <  2:591197/100‑1 (MQ=255)

                                                              aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                       >  2:871008/1‑100 (MQ=255)

                                                               aaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                      >  1:1162014/1‑100 (MQ=255)

                                                               aaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                      <  2:2418114/100‑1 (MQ=255)

                                                                 gAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCa                                    <  2:71723/100‑1 (MQ=255)

                                                                 gAAATCAGAAGCCACGATAGCTCGACCAATGGTCTGATTAAGTGATAGAAAGCGTGGCGCGGTTAATCATAGTCGAGATGTAGGGCAGATAAGGCGTTc                                     >  1:1758981/1‑99 (MQ=255)

                                                                   aaTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcg                                  <  2:1611919/100‑1 (MQ=255)

                                                                     tCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgcc                                >  1:1300462/1‑100 (MQ=255)

                                                                     tCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgcc                                <  2:2712126/100‑1 (MQ=255)

                                                                     tCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGACGTTCAcgcc                                >  1:2505381/1‑100 (MQ=255)

                                                                          agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATc                           <  2:1431349/100‑1 (MQ=255)

                                                                           gcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATGCGGCGTGAAcgccttatcc                          <  1:831602/100‑7 (MQ=38)

                                                                           gcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATcc                          <  1:333996/100‑1 (MQ=255)

                                                                            ccACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                         <  2:844779/100‑1 (MQ=255)

                                                                             cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTATGCCGGATAAGGCGTTCACGCCGCATCCgg                        >  1:2297788/1‑100 (MQ=255)

                                                                             cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                        >  2:29761/1‑100 (MQ=255)

                                                                             cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                        >  2:258636/1‑100 (MQ=255)

                                                                             cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                        >  2:2156615/1‑100 (MQ=255)

                                                                              aCGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                       <  1:221213/100‑1 (MQ=255)

                                                                               cGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa                      <  2:3470520/100‑1 (MQ=255)

                                                                                gATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                     >  2:131683/1‑100 (MQ=255)

                                                                                  tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                   <  2:919711/100‑1 (MQ=255)

                                                                                  tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                   <  2:3731834/100‑1 (MQ=255)

                                                                                  tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                   <  2:3648762/100‑1 (MQ=255)

                                                                                  tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                   <  2:1850740/100‑1 (MQ=255)

                                                                                   aGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCg                  >  2:3575305/1‑100 (MQ=255)

                                                                                   aGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCg                  >  2:747370/1‑100 (MQ=255)

                                                                                    gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                 >  1:1596094/1‑100 (MQ=255)

                                                                                     cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt                >  2:3520741/1‑100 (MQ=255)

                                                                                     cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt                >  1:2142514/1‑100 (MQ=255)

                                                                                      tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg               >  2:1684318/1‑100 (MQ=255)

                                                                                       cGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc              >  2:300318/1‑100 (MQ=255)

                                                                                           cAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTGAATCATCGTCGATATGTAGGCCGGACAAGGCGTTCACGCATCATCCGGCACCGAATGCCTGa          >  1:2037182/1‑100 (MQ=37)

                                                                                            aaTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAt         >  1:2916080/1‑100 (MQ=255)

                                                                                             aTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATg        <  2:1574341/100‑1 (MQ=255)

                                                                                             aTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATg        <  1:3735506/100‑1 (MQ=255)

                                                                                              tGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGc       <  1:1096407/100‑1 (MQ=255)

                                                                                                gTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa     >  2:1052303/1‑100 (MQ=255)

                                                                                                gTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa     >  1:70907/1‑100 (MQ=255)

                                                                                                 tCTGATTAACCGCTATAAAGCGTGGTGCGGTTCATCATCCTCCATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc    <  1:2678935/100‑1 (MQ=25)

                                                                                                   tGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGTCTGATGCGAcgc  <  1:1849358/100‑1 (MQ=255)

                                                                                                   tGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcga  >  2:1176360/1‑99 (MQ=255)

AGTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC  >  NC_000913/4235277‑4235475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.