New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4323250 =NA (NA)15 (0.120) 6/164 NT NA noncoding (5/87 nt) REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4323280 = NA (NA)noncoding (35/87 nt) REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 218 total aligned reads displayed.

ACCAACACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCTTT  >  NC_000913/4323151‑4323350
                                                                                                   |                                                                                                    
acCAACACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAgg                                                                                                      >  2:2764046/1‑100 (MQ=255)
acCAAAACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAgg                                                                                                      <  1:287802/100‑1 (MQ=255)
 ccAACACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGc                                                                                                     >  1:2388603/1‑100 (MQ=255)
  cgctaagcgcgatgagttcggtgagtaaagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGcc                                                                                                    <  1:651899‑M1/3‑1 (MQ=255)
  cgctaagcgcgatgagttcggtgagtaaagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGc                                                                                                     <  2:3463030‑M1/2‑1 (MQ=255)
   aaCACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCg                                                                                                   <  2:1496529/100‑1 (MQ=255)
   aaCACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCg                                                                                                   >  2:2124366/1‑100 (MQ=255)
   aaCACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCg                                                                                                   >  1:1795481/1‑100 (MQ=255)
     cacGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGa                                                                                                 <  1:1547364/100‑1 (MQ=255)
     cacGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGa                                                                                                 <  2:2429310/100‑1 (MQ=255)
      acGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGAt                                                                                                <  1:438462/100‑1 (MQ=255)
      aagcgggatgagttcggtgagtaaagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGAt                                                                                                >  1:1514856‑M1/94‑100 (MQ=255)
        ggCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATaa                                                                                              >  1:975189/1‑100 (MQ=255)
         gCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAg                                                                                             <  1:3154298/100‑1 (MQ=255)
         gCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAg                                                                                             <  2:749080/100‑1 (MQ=255)
             gTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGc                                                                                         <  1:1966500/100‑1 (MQ=255)
             gTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGc                                                                                         >  2:3407004/1‑100 (MQ=255)
               aCAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCtt                                                                                       <  2:3657346/100‑1 (MQ=255)
               aCAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCtt                                                                                       >  1:2554740/1‑100 (MQ=255)
                cAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTg                                                                                      <  2:664569/100‑1 (MQ=255)
                cAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTg                                                                                      >  2:1820834/1‑100 (MQ=255)
                cAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTg                                                                                      >  1:1755611/1‑100 (MQ=255)
                    ggCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCAcc                                                                                  <  2:3767938/100‑1 (MQ=255)
                     ggtgagtaaagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCg                                                                                 <  2:247879‑M1/22‑1 (MQ=255)
                     gCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCg                                                                                 <  2:3205333/100‑1 (MQ=255)
                     gCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCg                                                                                 <  2:3742488/100‑1 (MQ=255)
                      cccAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGc                                                                                >  1:1459454/1‑100 (MQ=255)
                       ccAGGTGAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCAcc                                                                                  <  1:1320628/97‑1 (MQ=255)
                       ccAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCa                                                                               >  2:2183700/1‑100 (MQ=255)
                          gCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATcc                                                                            >  1:2476833/1‑100 (MQ=255)
                          gCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATcc                                                                            >  2:2643414/1‑100 (MQ=255)
                             cAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGc                                                                         >  2:272928/1‑100 (MQ=255)
                             cAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGc                                                                         >  1:895378/1‑100 (MQ=255)
                             cAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGc                                                                         >  1:863812/1‑100 (MQ=255)
                             aagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGc                                                                         >  1:15913‑M1/71‑100 (MQ=255)
                              aGAAGCGAGAACCAGCTGCGCTTTGGTTGGTCGATGGTGATGGTTTTCATGTTTGGCCCCGGTCTGTAGACCGGATAAGGTGCTTGCACCGCATCCGGCa                                                                        <  1:351991/100‑1 (MQ=38)
                              aGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCa                                                                        <  1:1071473/100‑1 (MQ=255)
                               gcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGCAt                                                                       >  1:2965441‑M1/69‑100 (MQ=255)
                               gcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGCAt                                                                       >  2:435794‑M1/69‑100 (MQ=255)
                               gAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCAt                                                                       >  1:2259774/1‑100 (MQ=255)
                               gAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCAt                                                                       <  1:978309/100‑1 (MQ=255)
                                cggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcagccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGCATc                                                                      >  2:317010‑M1/68‑100 (MQ=255)
                                aaGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATc                                                                      <  2:55898/100‑1 (MQ=255)
                                    gagaACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACg                                                                  >  1:2197745/1‑100 (MQ=255)
                                    gagaACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACg                                                                  <  2:2898009/100‑1 (MQ=255)
                                     agaACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGc                                                                 >  2:519359/1‑100 (MQ=255)
                                      gaACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGcc                                                                >  1:2090272/1‑100 (MQ=255)
                                      gaACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGcc                                                                >  1:3161095/1‑100 (MQ=255)
                                      gaACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATCTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGcc                                                                >  1:263550/1‑100 (MQ=255)
                                        aCCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTg                                                              <  2:2670069/100‑1 (MQ=255)
                                        aCCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTg                                                              >  2:2432858/1‑100 (MQ=255)
                                        aCCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCATg                                                              >  1:3799999/1‑100 (MQ=255)
                                         ccAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGc                                                             <  2:3651806/100‑1 (MQ=255)
                                           aGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGcac                                                           >  2:2841672/1‑100 (MQ=255)
                                            gCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGcaca                                                          <  2:1937174/100‑1 (MQ=255)
                                                 gcTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTc                                                     >  2:3255350/1‑100 (MQ=255)
                                                  ctggggtgggGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCg                                                    <  1:3600486/97‑1 (MQ=255)
                                                    tgggtgggGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGa                                                  <  2:2065489/100‑1 (MQ=255)
                                                        tgggGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCg                                              >  2:1626343/1‑100 (MQ=255)
                                                          gggCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGAc                                            <  2:3212455/100‑1 (MQ=255)
                                                           ggCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACg                                           >  2:2381917/1‑100 (MQ=255)
                                                           ggCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGGAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGAc                                            <  2:602868/99‑1 (MQ=255)
                                                                tggtgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCggg                                      <  2:3071487/100‑1 (MQ=255)
                                                                 ggtgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCgggg                                     <  2:1365668/100‑1 (MQ=255)
                                                                  gtgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGc                                    >  2:1540539/1‑100 (MQ=255)
                                                                   tgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCg                                   <  1:1212484/100‑1 (MQ=255)
                                                                   tgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCg                                   <  2:402161/100‑1 (MQ=255)
                                                                     atggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGAATGCGACGCCGGGGCGTc                                 <  1:2776339/100‑1 (MQ=255)
                                                                      tggtTTGCGTGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCt                                <  1:950248/100‑1 (MQ=255)
                                                                      tggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCt                                <  1:1623970/100‑1 (MQ=255)
                                                                      tggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCt                                <  2:1206735/100‑1 (MQ=255)
                                                                        gtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCGCATTGTCGGATGCGACGCCGGGGCGTCTTa                              >  1:1469221/1‑100 (MQ=255)
                                                                        gtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTa                              >  1:3380794/1‑100 (MQ=255)
                                                                         tttGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGACGGGGCGTc                                 >  1:1031668/1‑96 (MQ=255)
                                                                           tGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATcc                           >  2:2881546/1‑100 (MQ=255)
                                                                           tGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATcc                           >  2:141152/1‑100 (MQ=255)
                                                                           tGCATGTGTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATcc                           <  2:638978/100‑1 (MQ=255)
                                                                            gCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCg                          >  1:1161365/1‑100 (MQ=255)
                                                                            gCATGTTTGGCGCCGGTCTGTAGGCCGGAGAAGGGGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTAGcc                           <  1:547147/99‑1 (MQ=39)
                                                                              aTGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATAAGACGCCCCGGCGTCGCATCCGAc                        <  1:1424119/100‑1 (MQ=25)
                                                                               tGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGAcc                       <  2:3108884/100‑1 (MQ=255)
                                                                                gTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCt                      <  2:3151474/100‑1 (MQ=255)
                                                                                 tttGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTa                     >  2:66129/1‑100 (MQ=255)
                                                                                  ntGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTAc                    >  1:3322159/2‑100 (MQ=255)
                                                                                   tGGCTCCGGTCTGTAGGTCGGATAAGCTGCTTGCACCGCATCCTGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACg                   <  1:2755975/100‑1 (MQ=255)
                                                                                   tGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACg                   <  2:813486/100‑1 (MQ=255)
                                                                                    ggCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGa                  >  1:3590347/1‑100 (MQ=255)
                                                                                      cTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGAtt                >  1:1346913/1‑100 (MQ=255)
                                                                                          ggTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACt            >  2:2269686/1‑100 (MQ=255)
                                                                                           gTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACt            >  1:619540/1‑99 (MQ=255)
                                                                                           gTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTg           >  1:3484301/1‑100 (MQ=255)
                                                                                            tCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGc          <  2:1485322/100‑1 (MQ=255)
                                                                                            tCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCCGATGCGACGCTGGGGCGTCTTATCCGACTTACGATTTACttc          <  2:2571871/100‑3 (MQ=39)
                                                                                               gTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCAcc       >  1:76352/1‑100 (MQ=255)
                                                                                                 aGGCCGGATAAGGTGCTTGCACCGCATCCGGCACCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTGACTGCACCGc     >  1:2498287/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCt    >  2:1683832/1‑100 (MQ=255)
                                                                                                   GCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCtt   >  2:1050886‑M1/1‑100 (MQ=255)
                                                                                                   GCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCtt   >  1:3247094‑M1/1‑100 (MQ=255)
                                                                                                   GCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCtt   >  1:2432846‑M1/1‑100 (MQ=255)
                                                                                                   GCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGATCTTATCCGACCTACGATTTACTGCACCGCttt  >  1:1886363‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                    
ACCAACACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCTTT  >  NC_000913/4323151‑4323350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.