New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627665107 (0.790)9 (0.070) 7/170 NT 7.9% coding (351/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 = 4627683 107 (0.830)coding (369/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 147 total aligned reads displayed.

CAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTAT  >  NC_000913/4627567‑4627764
                                                                                                  |                                                                                                   
cAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCagcagc                                                                                                    <  1:866394/100‑1 (MQ=255)
cAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCagcagc                                                                                                    >  2:2933504/1‑100 (MQ=255)
  gcgcgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCg                                                                                                  <  1:1276468/100‑1 (MQ=255)
    gcgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGAc                                                                                                <  2:222262/100‑1 (MQ=255)
     cgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGAcc                                                                                               <  2:1296690/100‑1 (MQ=255)
      gcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCg                                                                                              <  2:3748665/100‑1 (MQ=255)
      gcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCg                                                                                              >  2:333710/1‑100 (MQ=255)
       ccTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGt                                                                                             >  1:3235572/1‑100 (MQ=255)
         tGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACGCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGc                                                                                           >  1:1286717/1‑100 (MQ=255)
           tAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCg                                                                                         <  1:3425218/100‑1 (MQ=255)
            aGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCgg                                                                                        <  2:882980/100‑1 (MQ=255)
             gCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGa                                                                                       >  1:2903616/1‑100 (MQ=255)
              ccAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGccgatccggcacggt                                                                                      <  1:2933490‑M1/100‑16 (MQ=255)
                aGGTTGACGAGCTGCATATCATTATGGGTTTTGACGCTACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCg                                                                                    <  2:2677907/100‑1 (MQ=255)
                aGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCg                                                                                    <  2:717063/100‑1 (MQ=255)
                   ttGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTct                                                                                 >  2:141960‑M2/1‑98 (MQ=255)
                    tGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTctg                                                                                >  1:3433367‑M2/1‑97 (MQ=255)
                    tGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTGGTTCGAGGACAGTGCCATGTCGTAGCAGCCGACCGTGCCGGa                                                                                       <  1:332635/93‑1 (MQ=255)
                     gACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTctgc                                                                               <  1:2900667‑M2/100‑5 (MQ=255)
                      aCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                              <  2:1756660/100‑1 (MQ=255)
                      aCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTACCATGACGCAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                              >  1:2579190/1‑100 (MQ=255)
                       cGAGCTGCATATCATTATGGGTTTTGACGATGCCCGTGACCGCGCGTTGTTCGAAGACAGTGCCCTGTCGCAGCAGacgatccggcacggtcggctgctg                                                                             <  1:1125296‑M1/100‑25 (MQ=255)
                       cGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGacgatccggcacggtcggctgctg                                                                             <  2:1580264‑M1/100‑25 (MQ=255)
                        gAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGacgatccggcacggtcggctgctgc                                                                            <  2:1135972‑M1/100‑26 (MQ=255)
                        gAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGacgatccggcacggtcggctgctgc                                                                            <  1:2724206‑M1/100‑26 (MQ=255)
                          gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                          <  1:994378/100‑1 (MQ=255)
                           cTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGacgatccggcacggtcggctgctgcgac                                                                         <  1:1842266‑M1/100‑29 (MQ=255)
                            tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                        >  2:3465955/1‑100 (MQ=255)
                            tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTCGTTCGAAGACAGTGCCATGTCGCAGCAGacgatccggcacggtcggctgctgcgaca                                                                        <  1:2679620‑M1/100‑30 (MQ=255)
                             gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                                                       <  2:354308/100‑1 (MQ=255)
                                tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                    <  2:1571064/100‑1 (MQ=255)
                                tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCCGCGTTGGTTATTg                                                                    >  1:1012953/1‑100 (MQ=255)
                                 atCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGc                                                                   <  2:2037750/100‑1 (MQ=255)
                                  tCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCa                                                                  <  1:267664/100‑1 (MQ=255)
                                   cATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaa                                                                 >  1:5535/1‑100 (MQ=255)
                                    aTTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaaa                                                                <  2:1789001/100‑1 (MQ=255)
                                       aTGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtt                                                             >  1:1059184/1‑100 (MQ=255)
                                        tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                            <  2:718727/100‑1 (MQ=255)
                                        tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                            <  2:3584964/100‑1 (MQ=255)
                                        tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                            <  2:2704976/100‑1 (MQ=255)
                                          ggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                          <  1:1093/100‑1 (MQ=255)
                                           gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTTCAAACtttt                                                           >  1:131906/1‑98 (MQ=255)
                                           gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                         <  2:1306783/100‑1 (MQ=255)
                                            ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                        <  2:654497/100‑1 (MQ=255)
                                            ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                        <  1:2686901/100‑1 (MQ=255)
                                            ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                        <  1:2701446/100‑1 (MQ=255)
                                            ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGAGCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                         >  1:2562755/1‑99 (MQ=255)
                                             tttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTGGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                                                       >  1:2119097/1‑100 (MQ=255)
                                               tGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAatat                                                     >  1:2884301/1‑100 (MQ=255)
                                                gACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                    >  1:3819617/1‑100 (MQ=255)
                                                gACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                    >  1:1436709/1‑100 (MQ=255)
                                                  cGATACCCTTGACCGCGCGTTGTTCGAAGAGAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAg                                                  <  1:1705540/100‑1 (MQ=255)
                                                      aCCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaa                                              <  2:3733463/100‑1 (MQ=255)
                                                       cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                             >  2:2448882/1‑100 (MQ=255)
                                                       cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGCTGGTTATTGCAAACTTTTAAATATCAGaaaca                                             >  1:3134542/1‑98 (MQ=255)
                                                          gTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAatat                                          >  1:418640/1‑100 (MQ=255)
                                                           tGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAAGATCGGaagagcaca                                         >  2:1077468/1‑93 (MQ=255)
                                                             aCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTGTTAAATATCAGAAAAATATTCg                                       >  1:2397410/1‑100 (MQ=255)
                                                             aCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTACAAACTTTTAAATATCAGAAAAATATTCg                                       >  1:668569/1‑100 (MQ=255)
                                                              ccGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGc                                      >  2:1611167/1‑100 (MQ=255)
                                                               cgcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGc                                      <  1:1529230/99‑1 (MQ=255)
                                                                gcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCAt                                    >  2:2973210/1‑100 (MQ=255)
                                                                gcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCAt                                    >  2:2839568/1‑100 (MQ=255)
                                                                 cgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCAtt                                   >  2:657380/1‑100 (MQ=255)
                                                                   cgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCa                                 >  1:1458277/1‑100 (MQ=255)
                                                                     ttgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATg                               <  1:4097/100‑1 (MQ=255)
                                                                        ttCGAAGACAGTGCCATGTCGCAGCCGCCGACCGTGCCGGATCGTCTGAGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCACTCATGCtt                            <  1:3180498/100‑1 (MQ=255)
                                                                        ttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCtt                            >  1:535079/1‑100 (MQ=255)
                                                                         tCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCttt                           >  1:1703025/1‑100 (MQ=255)
                                                                          cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTc                          <  1:7666/100‑1 (MQ=255)
                                                                          cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTc                          >  1:1188147/1‑100 (MQ=255)
                                                                          cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCGGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCttt                           <  1:3745789/99‑1 (MQ=255)
                                                                           gAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAACATATTCGCATTCATGCTTTCa                         >  1:520580/1‑100 (MQ=255)
                                                                            aaGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCaa                        >  2:840093/1‑100 (MQ=255)
                                                                            aaGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCaa                        >  1:3077212/1‑100 (MQ=255)
                                                                             aGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                       <  2:1809862/100‑1 (MQ=255)
                                                                              gACAGTGCCATGTCGCAGCAGCCGGCCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                       <  1:2948614/99‑1 (MQ=255)
                                                                                cAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGaa                    >  1:694805/1‑100 (MQ=255)
                                                                                cAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGaa                    >  2:2861433/1‑100 (MQ=255)
                                                                                 aGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAag                   <  1:3465935/100‑1 (MQ=255)
                                                                                  gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga                  <  2:1743229/100‑1 (MQ=255)
                                                                                   tGCCATGTTGCAGCAGCCGACCGTGTCAGATCGACTGCGTTGGTTATTGCTATGTTTTAAATATCAGAAAAATATTCGCATACATGCTTTCCACGAag                   <  1:2161412/98‑1 (MQ=255)
                                                                                   tGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAagag                 <  1:2861419/100‑1 (MQ=255)
                                                                                    gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAgg                >  1:3411935/1‑100 (MQ=255)
                                                                                    gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAgg                <  1:2261071/100‑1 (MQ=255)
                                                                                      cATGTCGCAGCAGCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatg              <  1:175331‑M2/100‑70 (MQ=255)
                                                                                       aTGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCa             <  2:2206544/100‑1 (MQ=255)
                                                                                         gTCGCAGCAGCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcag           <  1:1842266‑M2/100‑73 (MQ=255)
                                                                                         gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg           >  2:2659541/1‑100 (MQ=255)
                                                                                         gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg           <  1:663841/100‑1 (MQ=255)
                                                                                           cGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGa         >  1:681061/1‑100 (MQ=255)
                                                                                           cGCAGCAGCCGACCGTGCCGGATCATctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagct         <  1:1510827‑M2/100‑75 (MQ=255)
                                                                                            gcagcaGCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagctc        <  1:2724206‑M2/100‑76 (MQ=255)
                                                                                            gcagcaGCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagctc        <  2:1135972‑M2/100‑76 (MQ=255)
                                                                                             cagcagCCGACCGTGCCGGATCGTctgctgcgacagggcactgtcttcgaacaacgcgcggtcacgggcatcgtcaaaacccataatgatatgcagctcg       <  1:1125296‑M2/100‑77 (MQ=255)
                                                                                               gcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg     <  2:1637699/100‑1 (MQ=255)
                                                                                               gcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg     <  2:2411956/100‑1 (MQ=255)
                                                                                                cagacgatccggcacggtcggctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagctcgtca    >  1:667007‑M1/1‑3 (MQ=255)
                                                                                                  gcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTAt  >  1:902066/1‑100 (MQ=255)
                                                                                                  gacgatccggcacggtcggctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagctcgtcaac  >  2:1802983‑M1/1‑1 (MQ=255)
                                                                                                  |                                                                                                   
CAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTAT  >  NC_000913/4627567‑4627764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.