New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627665107 (0.790)9 (0.070) 7/170 NT 7.9% coding (351/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 = 4627683 107 (0.830)coding (369/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 130 total aligned reads displayed.

GGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATG  >  NC_000913/4627584‑4627780
                                                                                                   |                                                                                                 
ggTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGt                                                                                                   <  1:789156/100‑1 (MQ=255)
 gTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTc                                                                                                  >  2:1802983‑M2/1‑99 (MQ=255)
  ttGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTct                                                                                                 >  2:141960‑M2/1‑98 (MQ=255)
   tGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTctg                                                                                                >  1:667007‑M2/1‑97 (MQ=255)
     aCGAGCTGCATATTATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                                              >  1:1170705/1‑100 (MQ=255)
     aCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                                              <  2:1756660/100‑1 (MQ=255)
     aCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTACCATGACGCAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                                              >  1:2579190/1‑100 (MQ=255)
        aGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                           <  2:2497716/100‑1 (MQ=255)
         gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                          <  1:994378/100‑1 (MQ=255)
         gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                           >  1:1435735/1‑99 (MQ=255)
          cTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGTCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                         <  2:499586/100‑1 (MQ=255)
           tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                                        >  2:3465955/1‑100 (MQ=255)
           tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                                        >  1:1957787/1‑100 (MQ=255)
           tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                                        >  1:3083784/1‑100 (MQ=255)
            gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                                                                       <  2:354308/100‑1 (MQ=255)
               tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                                    <  2:1571064/100‑1 (MQ=255)
               tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCCGCGTTGGTTATTg                                                                                    >  1:1012953/1‑100 (MQ=255)
               tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAACAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                                    >  2:112862/1‑100 (MQ=255)
                  cATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaa                                                                                 >  1:5535/1‑100 (MQ=255)
                   aTTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaaa                                                                                <  2:1789001/100‑1 (MQ=255)
                      aTGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtt                                                                             >  1:1059184/1‑100 (MQ=255)
                       tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                            <  2:2704976/100‑1 (MQ=255)
                       tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                            >  2:368408/1‑100 (MQ=255)
                       tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                            <  2:3584964/100‑1 (MQ=255)
                       tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                            <  2:718727/100‑1 (MQ=255)
                        gggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtttt                                                                           <  2:2900681/100‑1 (MQ=255)
                         ggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                                          <  1:1093/100‑1 (MQ=255)
                          gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTTCAAACtttt                                                                           >  1:131906/1‑98 (MQ=255)
                           ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                                        <  2:1708604/100‑1 (MQ=255)
                           ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                                        <  2:654497/100‑1 (MQ=255)
                           ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                                        <  1:2701446/100‑1 (MQ=255)
                           ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                                        <  1:2686901/100‑1 (MQ=255)
                           ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGAGCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                                         >  1:2562755/1‑99 (MQ=255)
                            tttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTGGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                                                                       >  1:2119097/1‑100 (MQ=255)
                              tGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAatat                                                                     >  1:2884301/1‑100 (MQ=255)
                              tGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAatat                                                                     >  2:1247561/1‑100 (MQ=255)
                               gACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                                    >  1:1436709/1‑100 (MQ=255)
                                aCGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCa                                                                   <  2:761517/100‑1 (MQ=255)
                                 cGATACCCTTGACCGCGCGTTGTTCGAAGAGAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAg                                                                  <  1:1705540/100‑1 (MQ=255)
                                      cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                                             >  2:2448882/1‑100 (MQ=255)
                                      cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGCTGGTTATTGCAAACTTTTAAATATCAGaaaca                                                             >  1:3134542/1‑98 (MQ=255)
                                         gTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAatat                                                          >  1:418640/1‑100 (MQ=255)
                                            aCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTGTTAAATATCAGAAAAATATTCg                                                       >  1:2397410/1‑100 (MQ=255)
                                            aCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTACAAACTTTTAAATATCAGAAAAATATTCg                                                       >  1:668569/1‑100 (MQ=255)
                                              cgcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGc                                                      <  1:1529230/99‑1 (MQ=255)
                                              cgcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCa                                                     >  1:386530/1‑100 (MQ=255)
                                               gcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGATCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCg                                                       <  1:927454/97‑1 (MQ=255)
                                               gcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCan                                                    <  2:2077316/100‑2 (MQ=255)
                                               gcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCAt                                                    >  2:2973210/1‑100 (MQ=255)
                                               gcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCAt                                                    >  2:2839568/1‑100 (MQ=255)
                                                  cgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCa                                                 >  1:1458277/1‑100 (MQ=255)
                                                  cgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCa                                                 >  1:2850484/1‑100 (MQ=255)
                                                    ttgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATg                                               <  1:4097/100‑1 (MQ=255)
                                                       ttCGAAGACAGTGCCATGTCGCAGCCGCCGACCGTGCCGGATCGTCTGAGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCACTCATGCtt                                            <  1:3180498/100‑1 (MQ=255)
                                                       ttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCtt                                            >  1:535079/1‑100 (MQ=255)
                                                        tCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCttt                                           >  1:1703025/1‑100 (MQ=255)
                                                         cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTc                                          >  1:1188147/1‑100 (MQ=255)
                                                         cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTc                                          <  1:7666/100‑1 (MQ=255)
                                                         cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCGGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCttt                                           <  1:3745789/99‑1 (MQ=255)
                                                          gAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAACATATTCGCATTCATGCTTTCa                                         >  1:520580/1‑100 (MQ=255)
                                                            aGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                                       <  2:1809862/100‑1 (MQ=255)
                                                            aGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGACTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                                       <  1:2674439/100‑1 (MQ=255)
                                                             gACAGTGCCATGTCGCAGCAGCCGGCCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                                       <  1:2948614/99‑1 (MQ=255)
                                                             aaaagacataTGTCGCAGCAGCCGACCGTGCCGAATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACg                                      <  1:3595391/91‑1 (MQ=255)
                                                                aGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAag                                   <  1:3465935/100‑1 (MQ=255)
                                                                 gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga                                  <  2:1743229/100‑1 (MQ=255)
                                                                  tGCCATGTTGCAGCAGCCGACCGTGTCAGATCGACTGCGTTGGTTATTGCTATGTTTTAAATATCAGAAAAATATTCGCATACATGCTTTCCACGAag                                   <  1:2161412/98‑1 (MQ=255)
                                                                  tGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAagag                                 <  1:2861419/100‑1 (MQ=255)
                                                                   gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAGATATCAGAAAAATATTCGCATTCCTGCTTTCAACGCAGAgg                                >  1:637708/1‑100 (MQ=255)
                                                                   gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAgg                                <  1:2261071/100‑1 (MQ=255)
                                                                   gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAgg                                >  1:3411935/1‑100 (MQ=255)
                                                                     cATGTCGCAGCAGCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatg                              <  1:175331‑M2/100‑70 (MQ=255)
                                                                     cATGTCGCAGCAGCCGACCGTGACGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGc                              >  1:2206534/1‑100 (MQ=255)
                                                                      aTGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCa                             <  2:2206544/100‑1 (MQ=255)
                                                                       tGTCGCAGCAGCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacgacgcgcggtcacgggtatcgtcaaaacccataatgatatgca                            <  1:2679620‑M2/100‑72 (MQ=255)
                                                                        gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg                           >  1:3365424/1‑100 (MQ=255)
                                                                        gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg                           >  2:2659541/1‑100 (MQ=255)
                                                                          cGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGa                         >  1:681061/1‑100 (MQ=255)
                                                                          cGCAGCAGCCGACCGTGCCGGATCATctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagct                         <  1:1510827‑M2/100‑75 (MQ=255)
                                                                           gcagcaGCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagctc                        <  2:1135972‑M2/100‑76 (MQ=255)
                                                                           gcagcaGCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagctc                        <  1:2724206‑M2/100‑76 (MQ=255)
                                                                            cagcagCCGACCGTGCCGGATCGTctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagctcg                       <  2:1580264‑M2/100‑77 (MQ=255)
                                                                            cagcagCCGACCGTGCCGGATCGTctgctgcgacagggcactgtcttcgaacaacgcgcggtcacgggcatcgtcaaaacccataatgatatgcagctcg                       <  1:1125296‑M2/100‑77 (MQ=255)
                                                                              gcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                     <  2:1637699/100‑1 (MQ=255)
                                                                              gcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                     <  2:2411956/100‑1 (MQ=255)
                                                                              gcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                     <  2:681069/100‑1 (MQ=255)
                                                                                agcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTa                   >  1:2941054/1‑100 (MQ=255)
                                                                                 gcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTAt                  >  1:902066/1‑100 (MQ=255)
                                                                                 gacGACCGTGCAGAATCGTCTGCGTTGGTTATTACAAACTTTTAAGTATCAGAAAAAGATTGACATTCATGCTTTTAACGAAGAGGGCATGGAGCCGTAt                  >  1:860752/3‑100 (MQ=255)
                                                                                  ccGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATc                 >  1:707977/1‑100 (MQ=255)
                                                                                    gACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCg               >  2:2934277/1‑100 (MQ=255)
                                                                                     aCCGTGCCGGATCGGctgctgcgacatggcactgtcttcgaacaacgcgcggtcacgggtatcgtcaaaacccataatgatatgcagctcgtcaacctgg              <  1:2933490‑M2/100‑86 (MQ=255)
                                                                                      ccGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCa             >  2:2039055/1‑100 (MQ=255)
                                                                                          gCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACgg          >  1:1873719/1‑99 (MQ=255)
                                                                                            cGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTg       >  2:3779643/1‑100 (MQ=255)
                                                                                             ggATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTgg      <  2:2718903/100‑1 (MQ=255)
                                                                                             ggATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTgg      >  1:3319541/1‑100 (MQ=255)
                                                                                             ggATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTg       >  1:1545132/1‑99 (MQ=255)
                                                                                              gATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTggg     <  1:1025954/100‑1 (MQ=255)
                                                                                                 cGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtg  >  1:3347346/1‑100 (MQ=255)
                                                                                                   |                                                                                                 
GGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATG  >  NC_000913/4627584‑4627780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.