New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4630741 =168 (1.240)5 (0.040) 5/166 NT 3.3% coding (9/1938 nt) slt lytic murein transglycosylase, soluble
?NC_000913 4630772 = 140 (1.110)coding (40/1938 nt) slt lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 197 total aligned reads displayed.

AACGTGGCGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGT  >  NC_000913/4630643‑4630840
                                                                                                  |                                                                                                   
aaCGTGGCGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAg                                                                                                    <  1:1556417/100‑1 (MQ=255)
aaCGTGGCGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAg                                                                                                    <  2:2892495/100‑1 (MQ=255)
 aCGTGGCGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGc                                                                                                   <  2:2054277/100‑1 (MQ=255)
  atcccaggcctgcttgatttgcgcgtaacgactacgctgctcatccagtgagtcggctcgcgccacgctgctgaccgtcagcagacagacaccggcAGcc                                                                                                  >  1:1156531‑M1/97‑100 (MQ=255)
  atcccaggcctgcttgatttgcgcgtaacgactacgctgctcatccagtgagtcggctcgcgccacgctgctgaccgtcagcagacagacaccggcAGcc                                                                                                  >  2:864175‑M1/97‑100 (MQ=255)
  atcccaggcctgcttgatttgcgcgtaacgactacgctgctcatccagtgagtcggctcgcgccacgctgctgaccgtcagcagacagacaccggcAGcc                                                                                                  >  1:2385874‑M1/97‑100 (MQ=255)
    tGGCGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCaa                                                                                                >  1:2960819/1‑100 (MQ=255)
    tGGCGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCaa                                                                                                <  2:1869108/100‑1 (MQ=255)
       cGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACCCTTAGAGGATGCGCTTGTGGAAAAAGCCAAACa                                                                                             >  1:2970025/1‑100 (MQ=255)
       cGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACa                                                                                             >  2:3415837/1‑100 (MQ=255)
        gTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACaa                                                                                            >  2:2401721/1‑100 (MQ=255)
         tAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAg                                                                                           >  1:413369/1‑100 (MQ=255)
         tAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAg                                                                                           <  2:1706220/100‑1 (MQ=255)
             cGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTAc                                                                                       >  2:3653609/1‑100 (MQ=255)
              ggCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTAcc                                                                                      <  2:901762/100‑1 (MQ=255)
                 aaTGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTgg                                                                                   <  1:2614278/100‑1 (MQ=255)
                  aTGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTggc                                                                                  >  2:3507436/1‑100 (MQ=255)
                   tGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTggcg                                                                                 <  1:210421/100‑1 (MQ=255)
                   tGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTggcg                                                                                 >  1:2422211/1‑100 (MQ=255)
                   tGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTggcg                                                                                 >  1:2585356/1‑100 (MQ=255)
                     aCTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTggcggc                                                                               <  2:362891/100‑1 (MQ=255)
                     aCTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTggcggc                                                                               >  2:3790956/1‑100 (MQ=255)
                        ggTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGt                                                                            >  2:297423/1‑100 (MQ=255)
                         gTTAGCATAAATGCATTACGCGGCGTGACGCTGTAATGATGTATTAACACATAGAGGATCCGCTTGTGAAAAAACACAAACAAGTTACCTGGCGGCTGtt                                                                           <  1:2223330/100‑1 (MQ=255)
                         gTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGtt                                                                           <  2:3108022/100‑1 (MQ=255)
                         gTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGtt                                                                           >  1:2543627/1‑100 (MQ=255)
                          ttAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTGGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTg                                                                          <  1:1046392/100‑1 (MQ=255)
                           tAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTgg                                                                         >  1:2532682/1‑100 (MQ=255)
                           tAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTgg                                                                         <  1:2991482/100‑1 (MQ=255)
                            aGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGc                                                                        <  2:451158/100‑1 (MQ=255)
                             gCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCt                                                                       <  1:1618973/100‑1 (MQ=255)
                              cATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTg                                                                      >  2:1397281/1‑100 (MQ=255)
                              cATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTg                                                                      >  2:1506975/1‑100 (MQ=255)
                               aTAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACGTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTg                                                                      <  2:334513/99‑1 (MQ=255)
                                tAAATCTATTACGCGGCATGGCGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGcc                                                                    >  1:2334081/1‑100 (MQ=255)
                                tAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGcc                                                                    >  1:794782/1‑100 (MQ=255)
                                tAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGcc                                                                    <  2:776981/100‑1 (MQ=255)
                                tAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGcc                                                                    >  1:1073700/1‑100 (MQ=255)
                                  aaTCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCgg                                                                  <  2:3212433/100‑1 (MQ=255)
                                   aTCTATTACGCGGCATGACGCTGCCTTGATGTATTTACACTTAGAGGATGCGCTGCTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGc                                                                     >  1:3531770/1‑96 (MQ=255)
                                     gctgctcatccagtgagtcggctcgcgccacgctgctgaccgtcagcagacagacaccggcAGCCAAACAGGTTACCTGGCGGCTGTTGGCTGCCGgtgt                                                               >  1:811888‑M1/62‑100 (MQ=255)
                                     cTATTACGCGGCATGACGCTGCATTGATGTATGTACACTTAGAGGATGAAAAAAAAGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGgtgt                                                               <  1:1204551/100‑1 (MQ=255)
                                      tATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtc                                                              >  2:1587999/1‑100 (MQ=255)
                                      tATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtc                                                              <  2:1192675/100‑1 (MQ=255)
                                      tATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtc                                                              <  1:2573233/100‑1 (MQ=255)
                                       aTTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtct                                                             >  2:2398477/1‑100 (MQ=255)
                                        ttACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtctg                                                            <  2:3125469/100‑1 (MQ=255)
                                          aCGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAACCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtctgtc                                                          >  2:2008540/1‑100 (MQ=255)
                                            gcgGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGtctgtctg                                                        <  1:2051808/100‑1 (MQ=255)
                                             cgGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTctgc                                                       <  2:3066545/100‑1 (MQ=255)
                                             cgGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTctgc                                                       <  2:1334489/100‑1 (MQ=255)
                                              ggCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTctgct                                                      >  2:923830/1‑100 (MQ=255)
                                              ggCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTctgct                                                      <  2:2096315/100‑1 (MQ=255)
                                                 aTGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGAc                                                   >  1:1448573/1‑100 (MQ=255)
                                                 aTGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGAc                                                   <  2:59452/100‑1 (MQ=255)
                                                   gACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACgg                                                 <  1:2261443/100‑1 (MQ=255)
                                                     cGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTc                                               >  2:1310539/1‑100 (MQ=255)
                                                            ttGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagac                                        <  1:3020565/100‑3 (MQ=255)
                                                            ttGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagac                                        <  2:3591273/100‑3 (MQ=255)
                                                            ttGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagac                                        <  2:2267986/100‑3 (MQ=255)
                                                             tGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGt                                       <  1:1137274/100‑1 (MQ=255)
                                                             tGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagaca                                       <  2:690774/100‑4 (MQ=255)
                                                              gATGTATTTACACTTAGAGGGTGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagacag                                      <  1:3248531/100‑5 (MQ=255)
                                                              gATGTATTTACACTTAGAGGATGCGCTTGTGGAAAATGCCAAACAAGTTACCTGGCTGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagacag                                      <  1:1935805/100‑5 (MQ=255)
                                                              gATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagacag                                      <  2:2764257/100‑5 (MQ=255)
                                                                tGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGgc                                    <  2:541310/100‑1 (MQ=255)
                                                                 gTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGgcg                                   <  2:2784328/100‑1 (MQ=255)
                                                                 gTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGgcg                                   <  2:1236341/100‑1 (MQ=255)
                                                                   aTTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCAGATGGCTGCCGGTGACTGGCTGCTGAGGGACAGCGGCGGGGcgcg                                 >  1:2442639/1‑100 (MQ=255)
                                                                     ttACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAg                               <  2:1951426/100‑1 (MQ=255)
                                                                       acacTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGcc                             <  1:902633/100‑1 (MQ=255)
                                                                        cacTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGcc                             <  1:1880011/99‑1 (MQ=255)
                                                                         acTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCg                            <  1:1313556/99‑1 (MQ=255)
                                                                         acTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGa                           <  1:137514/100‑1 (MQ=255)
                                                                          cTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGAc                          >  2:3503475/1‑100 (MQ=255)
                                                                          cTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGAc                          <  1:2940302/100‑1 (MQ=255)
                                                                          cTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGAc                          <  1:3502102/100‑1 (MQ=255)
                                                                              gagGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCAc                      <  1:962841/100‑1 (MQ=255)
                                                                              gagGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCAc                      >  1:1777613/1‑100 (MQ=255)
                                                                              gagGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCAc                      >  1:2203209/1‑100 (MQ=255)
                                                                               agGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACt                     <  2:3084167/100‑1 (MQ=255)
                                                                                ggATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTg                    >  1:3519763/1‑100 (MQ=255)
                                                                                ggATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTg                    <  2:61780/100‑1 (MQ=255)
                                                                                 gATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTgg                   <  2:2532694/100‑1 (MQ=255)
                                                                                  aTGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTgg                   >  2:1288295/1‑99 (MQ=255)
                                                                                  aTGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGa                  <  1:3702249/100‑1 (MQ=255)
                                                                                   tGCGCTTGTGGAAAAAGCCAAACAAGGTACCTGGCGGCTGTTGGCGGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGa                  <  1:201252/99‑1 (MQ=255)
                                                                                    gcgcTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATg                >  2:413796/1‑100 (MQ=255)
                                                                                     cgcTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGa               >  2:2000428/1‑100 (MQ=255)
                                                                                      gcTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGag              <  2:1130054/100‑1 (MQ=255)
                                                                                         ttccgatctAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGagcag           >  2:3011860‑M1/10‑100 (MQ=255)
                                                                                           tgGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCg         <  1:798451/100‑1 (MQ=255)
                                                                                           tgGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCg         <  1:619876/100‑1 (MQ=255)
                                                                                            ggAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGt        <  2:1143772/100‑1 (MQ=255)
                                                                                            ggAAAAAGCCAAACAACTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGt        <  1:289883/100‑1 (MQ=255)
                                                                                             gAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTa       >  1:2719542/1‑100 (MQ=255)
                                                                                                 aaGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCg   <  2:3241615/100‑1 (MQ=255)
                                                                                                 aaGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCg   <  2:2719556/100‑1 (MQ=255)
                                                                                                 aaGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCg   <  2:2538655/100‑1 (MQ=255)
                                                                                                  AGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGt  <  1:1243416‑M1/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
AACGTGGCGTAAACGGCAATGACTGGTTAGCATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGT  >  NC_000913/4630643‑4630840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.