New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4630741 =168 (1.240)5 (0.040) 5/166 NT 3.3% coding (9/1938 nt) slt lytic murein transglycosylase, soluble
?NC_000913 4630772 = 140 (1.110)coding (40/1938 nt) slt lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 191 total aligned reads displayed.

CATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTGGGATAATC  >  NC_000913/4630673‑4630871
                                                                                                   |                                                                                                   
cATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTg                                                                                                     >  2:985370/1‑100 (MQ=255)
cATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTg                                                                                                     >  2:1506975/1‑100 (MQ=255)
cATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTg                                                                                                     >  2:1397281/1‑100 (MQ=255)
 aTAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACGTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTg                                                                                                     <  2:334513/99‑1 (MQ=255)
  tAAATCTATTACGCGGCATGGCGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGcc                                                                                                   >  1:2334081/1‑100 (MQ=255)
  tAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGcc                                                                                                   >  1:1073700/1‑100 (MQ=255)
  tAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGcc                                                                                                   <  2:776981/100‑1 (MQ=255)
    aaTCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCgg                                                                                                 <  2:1290779/100‑1 (MQ=255)
     aTCTATTACGCGGCATGACGCTGCCTTGATGTATTTACACTTAGAGGATGCGCTGCTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGc                                                                                                    >  1:3531770/1‑96 (MQ=255)
     aTCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGgt                                                                                                >  2:923628/1‑100 (MQ=255)
      tCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGgtg                                                                                               <  2:1588427/100‑1 (MQ=255)
      tCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGgtg                                                                                               <  1:438605/100‑1 (MQ=255)
       gctgctcatccagtgagtcggctcgcgccacgctgctgaccgtcagcagacagacaccggcAGCCAAACAGGTTACCTGGCGGCTGTTGGCTGCCGgtgt                                                                                              >  1:811888‑M1/62‑100 (MQ=255)
        tATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtc                                                                                             >  2:2734327/1‑100 (MQ=255)
        tATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtc                                                                                             <  2:1192675/100‑1 (MQ=255)
           tACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtctgt                                                                                          >  2:3142632/1‑100 (MQ=255)
            aCGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtctgtc                                                                                         >  2:277784/1‑100 (MQ=255)
            aCGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtctgtc                                                                                         >  2:1276331/1‑100 (MQ=255)
            aCGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAACCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGtgtctgtc                                                                                         >  2:2008540/1‑100 (MQ=255)
               cgGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTctgc                                                                                      <  2:1334489/100‑1 (MQ=255)
               cgGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTctgc                                                                                      <  1:1147373/100‑1 (MQ=255)
               cgGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGATTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTctgc                                                                                      <  1:254957/100‑1 (MQ=255)
                ggCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTctgct                                                                                     <  2:2096315/100‑1 (MQ=255)
                   aTGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGAc                                                                                  >  1:1448573/1‑100 (MQ=255)
                   aTGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGAc                                                                                  <  2:59452/100‑1 (MQ=255)
                    tGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACg                                                                                 <  2:3008677/100‑1 (MQ=255)
                     gACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACgg                                                                                <  1:2261443/100‑1 (MQ=255)
                      aCGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGt                                                                               >  2:689703/1‑100 (MQ=255)
                         cTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAATGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTcag                                                                            <  1:2432545/100‑1 (MQ=255)
                         cTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTcag                                                                            >  1:257504/1‑100 (MQ=255)
                           gCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTcagca                                                                          >  2:442760/1‑100 (MQ=255)
                            cATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTcagcag                                                                         >  1:12218/1‑100 (MQ=255)
                             aTTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCagcagc                                                                        >  2:3076328/1‑100 (MQ=255)
                              ttGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagac                                                                       <  2:3591273/100‑3 (MQ=255)
                              ttGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagac                                                                       <  1:1159917/100‑3 (MQ=255)
                              ttGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagac                                                                       <  2:2267986/100‑3 (MQ=255)
                                gATGTATTTACACTTAGAGGGTGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagacag                                                                     <  1:3248531/100‑5 (MQ=255)
                                gATGTATTTACACTTAGAGGATGCGCTTGTGGAAAATGCCAAACAAGTTACCTGGCTGCTGTTGGCTGCCGGTGTCTGTCTGCTGACCGTcagcagacag                                                                     <  1:1935805/100‑5 (MQ=255)
                                  tGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGgc                                                                   <  2:541310/100‑1 (MQ=255)
                                   gTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGgcg                                                                  <  2:1236341/100‑1 (MQ=255)
                                    tATTTACACTTAGAGGATGCGCTTGTGGAAAAAGACAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGgcg                                                                  >  1:2408032/1‑99 (MQ=255)
                                         acacTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGcc                                                            <  2:3213033/100‑1 (MQ=255)
                                          cacTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGcc                                                            <  1:1880011/99‑1 (MQ=255)
                                          cacTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCg                                                           <  2:1314968/100‑1 (MQ=255)
                                           acTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCg                                                           <  1:1313556/99‑1 (MQ=255)
                                           acTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGa                                                          <  1:137514/100‑1 (MQ=255)
                                            cTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGAc                                                         >  2:2001802/1‑100 (MQ=255)
                                            cTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGAc                                                         <  2:327325/100‑1 (MQ=255)
                                            cTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGAc                                                         >  2:3503475/1‑100 (MQ=255)
                                            cTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGAc                                                         <  1:3502102/100‑1 (MQ=255)
                                            cTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGAc                                                         <  1:2940302/100‑1 (MQ=255)
                                              tAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTc                                                       >  2:192622/1‑100 (MQ=255)
                                                gagGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCAc                                                     >  1:1777613/1‑100 (MQ=255)
                                                gagGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCAc                                                     >  1:2203209/1‑100 (MQ=255)
                                                  ggATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTg                                                   >  1:3519763/1‑100 (MQ=255)
                                                  ggATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTg                                                   <  1:1512392/100‑1 (MQ=255)
                                                   gATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTgg                                                  <  2:2532694/100‑1 (MQ=255)
                                                   gATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTgg                                                  <  1:2947851/100‑1 (MQ=255)
                                                     tGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCGGTTGTCTGCCGGTGTCTGTCTGCTGACAGTCAGCAGCGTGGCGCGCGCCGACTCACTg                                                   >  1:1729416/1‑97 (MQ=255)
                                                     tGCGCTTGTGGAAAAAGCCAAACAAGGTACCTGGCGGCTGTTGGCGGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGa                                                 <  1:201252/99‑1 (MQ=255)
                                                      gcgcTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATg                                               >  2:413796/1‑100 (MQ=255)
                                                        gcTTGTGTACAACGACAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATg                                               <  1:803092/98‑1 (MQ=255)
                                                        gcTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGag                                             <  2:1130054/100‑1 (MQ=255)
                                                         cTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGagc                                            <  2:3122940/100‑1 (MQ=255)
                                                          ttgttgAAAAAGCCAAAGAAGTTACCTGGCGGCTTGTGGGTGCCGGTGTCTGGCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATg                                               <  1:944955/96‑1 (MQ=255)
                                                          agacaccggcagccaacagccgccaggtaacttgtttggctGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGagca                                           >  2:1553671‑M2/42‑100 (MQ=255)
                                                           ttccgatctAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGagcag                                          >  2:3011860‑M1/10‑100 (MQ=255)
                                                             tgGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCg                                        <  1:798397/100‑1 (MQ=255)
                                                              ggAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCg                                        >  2:3412264/1‑99 (MQ=255)
                                                              ggAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGt                                       <  2:1143772/100‑1 (MQ=255)
                                                              ggAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGt                                       <  2:2694748/100‑1 (MQ=255)
                                                              ggAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGt                                       <  2:1995105/100‑1 (MQ=255)
                                                              ggAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGt                                       >  2:3695672/1‑100 (MQ=255)
                                                              ggAAAAAGCCAAACAACTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGt                                       <  1:289883/100‑1 (MQ=255)
                                                               gAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTa                                      >  1:2719542/1‑100 (MQ=255)
                                                               ccggcagccaacagccgccaggtaacttgtttggctGCCGCCGCCTGACTGCTGACGGTCAGCAGCGTGGCGCGAGCCGGCTCACTGGCTgcgc                                            >  1:364381‑M2/37‑94 (MQ=255)
                                                                cggcagccaacagccgccaggtaacttgtttggctGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAg                                     >  1:1897994‑M2/36‑100 (MQ=255)
                                                                 ggcagccaacagccgccaggtaacttgtttggctGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGt                                    >  2:2379694‑M2/35‑100 (MQ=255)
                                                                   aaGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGTAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCg                                  <  1:2072280/100‑1 (MQ=255)
                                                                   aaGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCg                                  <  2:2538655/100‑1 (MQ=255)
                                                                    AGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTcactggatgagcagagatcggaa                                 <  1:3011844‑M1/100‑10 (MQ=255)
                                                                      CCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTa                               <  1:3737643‑M1/100‑1 (MQ=255)
                                                                       CAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTAc                              <  1:1783032‑M1/100‑1 (MQ=255)
                                                                        AAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTAcg                             <  1:1050763‑M1/100‑1 (MQ=255)
                                                                          aCAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTAcgcg                           >  2:2060583/1‑100 (MQ=255)
                                                                           cAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACgcgc                          >  2:3705392/1‑100 (MQ=255)
                                                                            aaGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCa                         <  1:964010/100‑1 (MQ=255)
                                                                                 aCCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCa                    <  1:3415817/100‑1 (MQ=255)
                                                                                  ccTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCaa                   >  2:603969/1‑100 (MQ=255)
                                                                                   cTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAg                  <  2:1929360/100‑1 (MQ=255)
                                                                                     ggcggcTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCa                <  1:3110755/100‑1 (MQ=255)
                                                                                        ggcTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGc             >  2:1760413/1‑100 (MQ=255)
                                                                                        ggcTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGc             <  1:1133014/100‑1 (MQ=255)
                                                                                         gcTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGcc            >  1:2462846/1‑100 (MQ=255)
                                                                                          cTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAACCAAGCAGGCCt           >  1:2226143/1‑100 (MQ=255)
                                                                                            gTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTgg         >  1:613176/1‑100 (MQ=255)
                                                                                             tttgCTGCCGGTGTCTGTCTGCTGACGGCCAGCAGCGTGGAGCGAGCCGACTCACTGCATGAGCAGCGTAGCCGTTACGCGCAAATCAAGCa                >  1:773158/4‑92 (MQ=255)
                                                                                             ttggctGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTggg        <  2:1726358‑M2/94‑1 (MQ=255)
                                                                                               ggctGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTGGGa       <  1:850651‑M2/95‑1 (MQ=255)
                                                                                               ggctGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTGGGAt      >  2:864175‑M2/5‑100 (MQ=255)
                                                                                                   |                                                                                                   
CATAAATCTATTACGCGGCATGACGCTGCATTGATGTATTTACACTTAGAGGATGCGCTTGTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTGGGATAATC  >  NC_000913/4630673‑4630871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.