New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4623082157 (1.160)20 (0.150) 9/170 NT 12.1% coding (1314/1332 nt) yjjJ putative protein kinase
?NC_000913 = 4623098 141 (1.090)coding (1330/1332 nt) yjjJ putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 192 total aligned reads displayed.

GCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTGCAGC  >  NC_000913/4622999‑4623197
                                                                                                   |                                                                                                   
 ccAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTa                                                                                                    <  2:2883306‑M2/100‑2 (MQ=255)
  cAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaa                                                                                                   <  1:759140‑M2/100‑3 (MQ=255)
  cAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaa                                                                                                   <  2:3237574‑M2/100‑3 (MQ=255)
   agagATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaac                                                                                                  >  1:2373130‑M2/1‑97 (MQ=255)
   agagATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaac                                                                                                  >  2:1687158‑M2/1‑97 (MQ=255)
   agagATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaac                                                                                                  >  1:1534504‑M2/1‑97 (MQ=255)
   agagATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaac                                                                                                  >  2:489022‑M2/1‑97 (MQ=255)
    gagaTCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaact                                                                                                 <  2:1951694‑M2/100‑5 (MQ=255)
     agaTCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTa                                                                                                <  2:1311560/100‑1 (MQ=255)
      gaTCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTAc                                                                                               >  2:3738436/1‑100 (MQ=255)
       aTCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTAcc                                                                                              <  2:919521/100‑1 (MQ=255)
         cctcgTATCAGCGAGGCGTTTCGCCACATTGCGCAAGATATGCCGGAAAAAAGCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCtt                                                                                            <  2:2791388/97‑1 (MQ=255)
         ccGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCtt                                                                                            >  1:579640/1‑100 (MQ=255)
         ccGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTACCCGCCCATGCGGGCaactttc                                                                                              >  1:1253858‑M2/1‑91 (MQ=255)
          cgcgTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTa                                                                                           <  1:1970143/100‑1 (MQ=255)
          cgcgTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTa                                                                                           >  1:1019106/1‑100 (MQ=255)
          cgcgTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTACCCGCCCATGCGGGCaactttctct                                                                                           >  1:2560319‑M2/1‑90 (MQ=255)
           gcgTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTAc                                                                                          <  2:2751979/100‑1 (MQ=255)
             gTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACa                                                                                         <  1:299693/99‑1 (MQ=255)
             gTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAg                                                                                        <  2:1484977/100‑1 (MQ=255)
             gTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAg                                                                                        <  2:297004/100‑1 (MQ=255)
              tctaaGCGAGGCGTTTCACCACGTTGGGCAAGAAATGCAGGAAAAAGTCAAGCAAATTGAAGAGCAAGTTGCCCGCATGGGCGGGTAACTAGGTTACAg                                                                                        >  1:2311153/5‑99 (MQ=255)
              tATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGc                                                                                       >  2:1428760/1‑100 (MQ=255)
               aTCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGcc                                                                                      <  1:1579168/100‑1 (MQ=255)
                 cAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGcccc                                                                                    >  1:2846235/1‑100 (MQ=255)
                    cGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGc                                                                                 >  2:2603945/1‑100 (MQ=255)
                     gAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGcc                                                                                <  2:2815028/100‑1 (MQ=255)
                          gTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGccatcca                                                                           >  1:431035/1‑100 (MQ=255)
                          gTTTCGCCACATTGCGCAAGAAAGGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGTCGGGTAACTACCTTACAGCCCCCGccatcca                                                                           <  1:1992703/100‑1 (MQ=255)
                           tttCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGccatccat                                                                          <  1:102395/100‑1 (MQ=255)
                            ttCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATg                                                                         <  2:1241153/100‑1 (MQ=255)
                             tCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGc                                                                        >  1:3314027/1‑100 (MQ=255)
                              cGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGcc                                                                       <  2:1041360/100‑1 (MQ=255)
                              cGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGcc                                                                       <  2:744532/100‑1 (MQ=255)
                              cGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGcc                                                                       <  2:1787328/100‑1 (MQ=255)
                              cGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGcc                                                                       <  2:1903668/100‑1 (MQ=255)
                              cGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGc                                                                        >  1:3075229/1‑99 (MQ=255)
                               tccACATTGCGCAAGAAATGCCCGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCGCCGCCACCTATGCCg                                                                      >  1:1363937/2‑100 (MQ=255)
                                  acaTTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATa                                                                   <  2:2628481/100‑1 (MQ=255)
                                    aTTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAAc                                                                 <  1:3425808/100‑1 (MQ=255)
                                      tGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTc                                                               >  2:1727974/1‑100 (MQ=255)
                                       gcgcAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTcc                                                              >  2:705155/1‑100 (MQ=255)
                                        cgcAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCTCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCACGCCGACAACTc                                                               >  1:19389/1‑98 (MQ=255)
                                        cgcAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTccc                                                             >  1:1871052/1‑100 (MQ=255)
                                        cgcAAGAAATGCCGGAAAAAATCCGGCAAATAGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCACCGCCATCCATGCCGATAACTccc                                                             >  1:781784/1‑100 (MQ=255)
                                         gcAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCg                                                            <  1:3818896/100‑1 (MQ=255)
                                         gcAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCg                                                            <  1:3359409/100‑1 (MQ=255)
                                         gcAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCg                                                            >  1:2797582/1‑100 (MQ=255)
                                         gcAAGAAATGCCGGAAAAAATCCGGAAAATCGAAGAGAAAGTTGACCGCATGGGCGGGTAACTACATTACACCCCCCGCCATCCATGCCGATCAcagc                                                              >  1:303444/1‑95 (MQ=255)
                                          cAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGt                                                           <  2:3477189/100‑1 (MQ=255)
                                          cAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGt                                                           <  1:117624/100‑1 (MQ=255)
                                          cAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGt                                                           >  1:2951443/1‑100 (MQ=255)
                                           aaGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTa                                                          >  2:126427/1‑100 (MQ=255)
                                           aaGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTa                                                          <  1:725760/100‑1 (MQ=255)
                                                aTGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGctct                                                     <  2:367784/100‑1 (MQ=255)
                                                 tGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAATTCCCGTAGCTCtt                                                    <  2:3122444/100‑1 (MQ=255)
                                                   ccGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCtttt                                                  >  1:875092/1‑100 (MQ=255)
                                                     ggAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTc                                                <  2:1559948/100‑1 (MQ=255)
                                                      gAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTcc                                               <  2:2291061/100‑1 (MQ=255)
                                                      gAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTcc                                               <  2:1870344/100‑1 (MQ=255)
                                                      gAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGCGTAACTACCTTACAGCCCCCGCCATGCATGCCGATAACTCCCGTAGCTCTTTTTcc                                               <  1:2542764/100‑1 (MQ=255)
                                                       aaaaaaTCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCt                                              <  1:1339494/100‑1 (MQ=255)
                                                        aaaaaTCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTg                                             <  2:3648126/100‑1 (MQ=255)
                                                            aTCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTc                                          <  1:2736674/99‑1 (MQ=255)
                                                               cGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCggg                                      <  2:2943959/100‑1 (MQ=255)
                                                               cGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCgg                                       >  1:3503022/1‑99 (MQ=255)
                                                                ggCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGa                                     >  1:1732071/1‑100 (MQ=255)
                                                                  cAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAg                                   <  2:3432133/100‑1 (MQ=255)
                                                                  cAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAg                                   >  1:2104628/1‑100 (MQ=255)
                                                                  cAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAg                                   <  2:2668688/100‑1 (MQ=255)
                                                                   aaaTCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGt                                  <  2:317773/100‑1 (MQ=255)
                                                                    aaTCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTc                                 <  2:2917029/100‑1 (MQ=255)
                                                                     aTCGAAGAGAAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttcttttatttcttgcgcaatgtggcgaaacgcctcgcttat                                <  1:2637832‑M2/100‑70 (MQ=255)
                                                                       cGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTcaac                              >  1:269631/1‑100 (MQ=255)
                                                                       cGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTcaac                              >  1:540693/1‑100 (MQ=255)
                                                                        gAAGAGAAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacg                             <  2:1207119‑M2/100‑73 (MQ=255)
                                                                        gAAGAGAAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacg                             <  2:3211421‑M2/100‑73 (MQ=255)
                                                                        gAAGAGAAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtagcgaaacgcctcgctgataag                             <  1:927801‑M2/100‑73 (MQ=255)
                                                                        gAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATGACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTcaacc                             <  2:2474810/100‑1 (MQ=255)
                                                                         aaGAGAAAGCTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTcaacca                            <  1:3213405/100‑1 (MQ=255)
                                                                           gagaAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcg                           <  1:1628704‑M2/99‑75 (MQ=255)
                                                                            agcAAGTTGCCCGCATGGGC‑‑‑actttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctc                       <  1:225605‑M2/100‑80 (MQ=255)
                                                                            agaAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcgga                         <  2:3592611‑M2/100‑77 (MQ=255)
                                                                            agaAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACa                         >  1:3406988/1‑100 (MQ=255)
                                                                            agaAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACa                         <  1:2883292/100‑1 (MQ=255)
                                                                             gaAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggat                        <  2:1112895‑M2/100‑78 (MQ=255)
                                                                             gaAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAg                        <  2:3397268/100‑1 (MQ=255)
                                                                               aaGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatct                      <  2:2737563‑M2/100‑80 (MQ=255)
                                                                               aaGTTGCCCGCATGGGC‑‑‑actttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctctgg                    <  2:661879‑M2/100‑83 (MQ=255)
                                                                                     cccGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCg                 >  1:392899/1‑99 (MQ=255)
                                                                                     cccGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGc                >  2:2396727/1‑100 (MQ=255)
                                                                                     cccGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGc                >  2:2224887/1‑100 (MQ=255)
                                                                                     cccGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGc                >  2:1475452/1‑100 (MQ=255)
                                                                                     cccGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGc                >  1:2840373/1‑100 (MQ=255)
                                                                                     cccGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGc                >  1:805288/1‑100 (MQ=255)
                                                                                      ccGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCTTAGCTCTTTTTCCTGTTCCGGGAAGTTAACCAACAGCGCTTCg                 <  1:480566/98‑1 (MQ=255)
                                                                                      ccGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCg                 <  1:1451430/98‑1 (MQ=255)
                                                                                       cGCATGGGCGGGTCACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCGCGTAGCTCTTTTTCCTGTTCAGGGAAGTCAACCAACAGCGCGTCGCAc              >  1:3179185/1‑100 (MQ=255)
                                                                                            gggCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTg         <  2:67059/100‑1 (MQ=255)
                                                                                             ggCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTTTTCCGTGAAGTCAACCAACAGCGCTTCGCACTCCTGt        >  1:3122877/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTGCAGC  >  NC_000913/4622999‑4623197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.