New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2139702 =NA (NA)14 (0.110) 9/164 NT NA noncoding (1/37 nt) REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2139735 = NA (NA)noncoding (34/37 nt) REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 151 total aligned reads displayed.

CGTTCACCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGG  >  NC_000913/2139603‑2139801
                                                                                                   |                                                                                                   
ctgaatgactgggccgagcggaataaagattcccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagg                                                                                                     >  1:354554‑M1/100‑100 (MQ=255)
ctgaatgactgggccgagcggaataaagattcccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagg                                                                                                     <  1:3924530‑M1/1‑1 (MQ=255)
cGTTCACCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACg                                                                                                     >  2:2867368/1‑100 (MQ=255)
 gTTCACCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGc                                                                                                    >  1:1794517/1‑100 (MQ=255)
  gaatgactgggccgagcggaataaagattcccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGcc                                                                                                   >  1:1120671‑M1/98‑100 (MQ=255)
  gaatgactgggccgagcggaataaagattcccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGcc                                                                                                   <  1:3105974‑M1/3‑1 (MQ=255)
    cACCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTg                                                                                                 >  1:2488010/1‑100 (MQ=255)
     tgactgggccgagcggaataaagattcccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGa                                                                                                <  2:3643367‑M1/6‑1 (MQ=255)
     aCCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGa                                                                                                >  2:283230/1‑100 (MQ=255)
     aCCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGa                                                                                                >  1:3805328/1‑100 (MQ=255)
          cTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGa                                                                                           >  1:3643395/1‑100 (MQ=255)
          cTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGa                                                                                           >  2:282030/1‑100 (MQ=255)
           ttGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGAc                                                                                          >  1:2640058/1‑100 (MQ=255)
           ttGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGAc                                                                                          <  2:69769/100‑1 (MQ=255)
                cGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCttt                                                                                     <  1:2276354/100‑1 (MQ=255)
                   ggaataaagattcccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGATGCGACGCTTTAcg                                                                                  <  1:3745994‑M1/20‑1 (MQ=255)
                     cATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTAcgcg                                                                                <  1:1751842/100‑1 (MQ=255)
                     cATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTAcgcg                                                                                >  1:1444602/1‑100 (MQ=255)
                      aTAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATACCGCCACGAACGCCTGATGCGACACTTTAcgcg                                                                                >  2:613349/1‑99 (MQ=255)
                        agtagCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCt                                                                             <  2:1110247/100‑1 (MQ=255)
                         gtagCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCtt                                                                            >  2:1347390/1‑100 (MQ=255)
                          tagCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTa                                                                           <  2:1614176/100‑1 (MQ=255)
                           agCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTAt                                                                          <  1:643154/100‑1 (MQ=255)
                            attcccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGATGCGACGCTTTACGCGTCTTATc                                                                         >  2:3866319‑M1/72‑100 (MQ=255)
                              tcccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGATGCGACGCTTTACGCGTCTTATCAg                                                                       >  1:2837212‑M1/70‑100 (MQ=255)
                               aGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAgg                                                                      <  2:611150/100‑1 (MQ=255)
                                ggAACATCAAGCGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGc                                                                     >  1:1813282/1‑100 (MQ=255)
                                ggAAAATCAAGTGAACGGAACAGCCTTCAGTATTACCTATTCAGAATATAATGATGCCGCCACGAACGCCTGATAAGACGCGTAAAGCGTCGCATCAgg                                                                      <  2:1841864/99‑1 (MQ=21)
                                ccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGATGCGACGCTTTACGCGTCTTATCAGGc                                                                     >  1:2757585‑M1/68‑100 (MQ=255)
                                ccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGATGCGACGCTTTACGCGTCTTATCAGGc                                                                     >  1:3216700‑M1/68‑100 (MQ=255)
                                ccgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGATGCGACGCTTTACGCGTCTTATCAGGc                                                                     >  1:1538084‑M1/68‑100 (MQ=255)
                                 gAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGcc                                                                    <  2:2854640/100‑1 (MQ=255)
                                 gAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGcc                                                                    <  2:3019396/100‑1 (MQ=255)
                                 cgtaatggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGATGCGACGCTTTACGCGTCTTATCAGGcc                                                                    >  2:3745966‑M1/67‑100 (MQ=255)
                                  aaCATGAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGGTAAGACGCGTAAAGCGTCGCATCAGGcgt                                                                   <  2:147116/100‑3 (MQ=21)
                                  aaCATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGccn                                                                   <  2:2779216/100‑2 (MQ=255)
                                    cATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCAGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTa                                                                  >  1:2738610/1‑99 (MQ=255)
                                      tggcaaagatgtgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtagGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAg                                                               >  1:933162‑M1/62‑100 (MQ=255)
                                      tCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAg                                                               <  1:2261909/100‑1 (MQ=255)
                                       cAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAgg                                                              >  1:639394/1‑100 (MQ=255)
                                         aGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGAc                                                            >  1:1674708/1‑100 (MQ=255)
                                          gTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGAGGCGACGCTTTACGCGTCTTATCAGGCCTACAGGAc                                                            <  2:804663/99‑1 (MQ=255)
                                           tGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTg                                                          <  2:1212533/100‑1 (MQ=255)
                                           tGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTg                                                          >  1:1534228/1‑100 (MQ=255)
                                            gAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTgg                                                         >  2:3195072/1‑100 (MQ=255)
                                            gAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTgg                                                         >  1:1520625/1‑100 (MQ=255)
                                             aaCGGAACAGCCTTCGATCTTACATATTGAGAAAATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTAACAGGCCTACatcgttcct                                                        <  2:2390281/100‑9 (MQ=37)
                                              aaggAACATCCTTCGATCTTACATATTCAGATTATAATGATGCTGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTc                                                       <  1:1483748/98‑1 (MQ=37)
                                              aCGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTc                                                       >  2:3914301/1‑100 (MQ=255)
                                              aCGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTc                                                       >  2:1757929/1‑100 (MQ=255)
                                               cGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCa                                                      >  1:1274630/1‑100 (MQ=255)
                                                 tgaagaagttgctggagaagatgtaggttaccaggtgaccagtcctgtacGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCAcc                                                    >  1:3242218‑M1/51‑100 (MQ=255)
                                                    cAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTgg                                                 <  2:2417146/100‑1 (MQ=255)
                                                    cAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTgg                                                 >  1:3376151/1‑100 (MQ=255)
                                                     aGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGt                                                >  2:3931884/1‑100 (MQ=255)
                                                      gCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTCCGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTa                                               <  2:2118426/100‑1 (MQ=255)
                                                      gCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTa                                               >  1:3144136/1‑100 (MQ=255)
                                                      gCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTa                                               <  1:3874674/100‑1 (MQ=255)
                                                        cTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAAc                                             >  2:3028867/1‑100 (MQ=255)
                                                        cTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAAc                                             >  1:976344/1‑100 (MQ=255)
                                                         ttCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAAcc                                            <  1:361207/100‑1 (MQ=255)
                                                            gATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTAc                                         <  1:2195795/100‑1 (MQ=255)
                                                            gATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTAc                                         >  2:1001681/1‑100 (MQ=255)
                                                              tCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACAt                                       <  2:1315334/100‑1 (MQ=255)
                                                               cTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACAtc                                      <  2:1661472/100‑1 (MQ=255)
                                                                ttACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACAtct                                     >  1:1962332/1‑100 (MQ=255)
                                                                ttACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACAtct                                     <  2:1461792/100‑1 (MQ=255)
                                                                   cATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACAtcttct                                  <  2:1610588/100‑1 (MQ=255)
                                                                     tatTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTcc                                <  1:3370121/100‑1 (MQ=255)
                                                                       ttCAGAATATAATGATTCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAg                              <  1:1765334/100‑1 (MQ=255)
                                                                        tCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGc                             >  2:2744383/1‑100 (MQ=255)
                                                                         cAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCa                            >  2:1188724/1‑100 (MQ=255)
                                                                         cAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCa                            >  2:136194/1‑100 (MQ=255)
                                                                         cAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCa                            >  2:2878003/1‑100 (MQ=255)
                                                                          aGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCaa                           >  2:734337/1‑100 (MQ=255)
                                                                          aGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCaa                           >  2:2951595/1‑100 (MQ=255)
                                                                           gAATATAATGATGTCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAAc                          >  2:1283402/1‑100 (MQ=255)
                                                                             atatAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAActt                        >  2:3586249/1‑100 (MQ=255)
                                                                             atatAATCAAGACGCCACGAACGCCTAATGCGACGCTTTAAGCGTCTTATCAGGCCTACAGGCCTTGTCACCTGGTATCCTAGATCTTCTCCAGCAAc                          <  2:2351213/98‑1 (MQ=25)
                                                                              tataATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAActtc                       <  1:2525666/100‑1 (MQ=255)
                                                                                 aaTGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACttcttc                    <  1:2951613/100‑1 (MQ=255)
                                                                                  atgatgCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTca                   >  1:47816/1‑100 (MQ=255)
                                                                                  atgatgCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTca                   <  2:2923274/100‑1 (MQ=255)
                                                                                   tgatgCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTTGTAACCTACATCTTCTCCAGCAACTTCTTcac                  >  2:3194/1‑100 (MQ=255)
                                                                                   tgatgCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTcac                  <  1:107303/100‑1 (MQ=255)
                                                                                    gatgCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTcaca                 <  1:3028885/100‑1 (MQ=255)
                                                                                     atgCCGCCACGAACGCCTTATGCGACGCTTTAAGCGTCTTATCAGGCCTCCAGGACTGCTGATCTGGTAACCAACATCTTATCCAGAAACTGCTTCAAAt                >  2:1951082/1‑100 (MQ=25)
                                                                                     atgCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCATCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACAt                >  1:3394229/1‑100 (MQ=255)
                                                                                      tgCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATc               <  2:2806057/100‑1 (MQ=255)
                                                                                       gccgccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTCACCTACATCTTCTCCAGCAACTTCTTCACATCt              >  2:1678381/1‑100 (MQ=255)
                                                                                        ccgccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATc               >  2:655464/1‑98 (MQ=255)
                                                                                        ccgccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCtt             >  2:1756589/1‑100 (MQ=255)
                                                                                         cgccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTCCTTCACATCtt             >  1:549195/1‑99 (MQ=255)
                                                                                          gccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTg           <  1:1653618/100‑1 (MQ=255)
                                                                                           ccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGc          <  2:874999/100‑1 (MQ=255)
                                                                                           ccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGc          <  2:3812722/100‑1 (MQ=255)
                                                                                             aCGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCa        >  2:232158/1‑100 (MQ=255)
                                                                                                  cGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACg   >  2:210901/1‑100 (MQ=255)
                                                                                                  cGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATGACg   >  2:1073832/1‑100 (MQ=255)
                                                                                                   GCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACgg  <  2:3924500‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CGTTCACCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGG  >  NC_000913/2139603‑2139801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.