New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3493765NA (NA)14 (0.110) 6/162 NT NA noncoding (8/26 nt) REP248 (repetitive extragenic palindromic) element; contains 1 REP sequences REP248 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 3493775 NA (NA)noncoding (18/26 nt) REP248 (repetitive extragenic palindromic) element; contains 1 REP sequences REP248 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 213 total aligned reads displayed.

CTGTACGCTGTCGTCTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAAT  >  NC_000913/3493666‑3493863
                                                                                                   |                                                                                                  
  gTACGCTGTCGTCTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGc                                                                                                  >  1:586884/1‑100 (MQ=255)
    aCGCTGTCGTCTTTGTGATGTGCTACGTGTTAGGTTTAGTCAGACGTCACCGTCAGTATATCACCATAACCTAACATTAATTGCTCATGCCGGAAGGcc                                                                                                 >  2:362658/1‑98 (MQ=255)
      gcggtcgtcTTTGTGATGTGCTTCCTGTGAGGTTTCGTCAGCCGTCACGGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGc                                                                                                  <  2:589176/93‑1 (MQ=255)
          tcgtcTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTAtcgt                                                                                          <  1:287483/100‑1 (MQ=255)
            gTCTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTcg                                                                                        <  2:3859017‑M2/100‑3 (MQ=255)
            gTCTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTcg                                                                                        >  2:243893‑M2/1‑98 (MQ=255)
              cTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTcgtc                                                                                      >  2:2260547‑M2/1‑96 (MQ=255)
               tttGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTcgtcc                                                                                     >  1:1308256‑M2/1‑95 (MQ=255)
                 tgtgATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGacgatagtgccgtccgg                                                                                   <  1:512255‑M1/100‑18 (MQ=255)
                 tgtgATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGacgatagtgccgtccgg                                                                                   <  1:417983‑M1/100‑18 (MQ=255)
                 tgtgATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTcgtccgg                                                                                   >  2:535882‑M2/1‑93 (MQ=255)
                  gtgATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTcgtccggc                                                                                  >  1:2827462‑M2/1‑92 (MQ=255)
                  gtgATGTGCTTCCTGTGAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCAGTAATGGCTCATGCCGGACGGCACTATCGTcggccgg                                                                                   >  2:1775592‑M2/1‑92 (MQ=255)
                   tgATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGcc                                                                                 <  2:1876917/100‑1 (MQ=255)
                    gATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCt                                                                                <  2:1460288/100‑1 (MQ=255)
                     aTGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGacgatagtgccgtccggcatg                                                                               <  1:1545274‑M1/100‑22 (MQ=255)
                      tgtgCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCttt                                                                              <  2:2424954/100‑1 (MQ=255)
                      tgtgCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCttt                                                                              >  1:2121156/1‑100 (MQ=255)
                      tgtgCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCttt                                                                              >  1:2328250/1‑100 (MQ=255)
                           ttCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCctc                                                                         <  2:3542887/100‑1 (MQ=255)
                             ccTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCctctc                                                                       <  1:3824190/100‑1 (MQ=255)
                               tGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCtt                                                                     <  2:1435055/100‑1 (MQ=255)
                               tGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCtt                                                                     <  2:2452823/100‑1 (MQ=255)
                                gTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGTCCTTTTActctct                                                                      >  2:3672018/1‑98 (MQ=255)
                                  tAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTccc                                                                  >  2:2692634/1‑100 (MQ=255)
                                    ggTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATTCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTccccc                                                                >  2:3709696/1‑100 (MQ=255)
                                    ggTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTccccc                                                                <  1:3905345/100‑1 (MQ=255)
                                    ggTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTccccc                                                                <  1:2217456/100‑1 (MQ=255)
                                     gTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCg                                                               >  1:312286/1‑100 (MQ=255)
                                     gTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCg                                                               >  1:1162366/1‑100 (MQ=255)
                                     gTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCg                                                               >  2:283067/1‑100 (MQ=255)
                                      tttCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGc                                                              >  1:2034873/1‑100 (MQ=255)
                                        tCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTa                                                            <  1:1519217/100‑1 (MQ=255)
                                         cGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTAc                                                           >  1:2686320/1‑100 (MQ=255)
                                          gTCAGCCGTCACCGTCGGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACg                                                          >  2:646169/1‑100 (MQ=255)
                                          gTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACg                                                          >  1:575111/1‑100 (MQ=255)
                                          gTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCAGCCTTTTCCTCTCTTCCCCCGCTACg                                                          <  1:3330784/100‑1 (MQ=255)
                                             aGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGc                                                       >  1:1903030/1‑100 (MQ=255)
                                             aGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGc                                                       >  1:1110955/1‑100 (MQ=255)
                                               ccgtcaccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCAt                                                     >  2:1758944/1‑100 (MQ=255)
                                               ccgtcaccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCCTTTCCTCTCTTCCCCCGCTACGTGCAt                                                     >  1:809374/1‑100 (MQ=255)
                                                cgtcaccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATc                                                    >  1:3222147/1‑100 (MQ=255)
                                                 gtcaccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttat                                                   <  1:1653253‑M2/100‑40 (MQ=255)
                                                 gtcaccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCt                                                   >  2:576245/1‑100 (MQ=255)
                                                     ccgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTAtt                                                <  1:1981134/99‑1 (MQ=255)
                                                      cgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTc                                              <  2:888682/100‑1 (MQ=255)
                                                      cgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTc                                              <  1:1131915/100‑1 (MQ=255)
                                                      cgtcaGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTc                                              >  1:3803212/1‑100 (MQ=255)
                                                       gtcaGCATATCACGCTGACCTCTGGTTAGTTGCGCATGCCGGGGGGCACTATCGTCGTCCGGCCGTTTCCTCGCGTCACCCGCTACGTGCATCTATTTCt                                             <  2:2782274/100‑1 (MQ=255)
                                                         caGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCtat                                           <  2:2196891/100‑1 (MQ=255)
                                                          aGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggt                                          <  1:145164‑M2/100‑49 (MQ=255)
                                                          aGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCtata                                          <  2:1926570/100‑1 (MQ=255)
                                                          aGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCtata                                          >  1:252536/1‑100 (MQ=255)
                                                           gCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATaa                                         >  1:3940121/1‑100 (MQ=255)
                                                              tAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAAcc                                      >  2:3105920/1‑100 (MQ=255)
                                                              tAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAAcc                                      <  1:136215/100‑1 (MQ=255)
                                                              tAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAAcc                                      <  1:2294086/100‑1 (MQ=255)
                                                                acacCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCg                                    <  2:3473533/100‑1 (MQ=255)
                                                                 cacCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCg                                    <  2:1395837/99‑1 (MQ=255)
                                                                 cacCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGc                                   <  1:419628/100‑1 (MQ=255)
                                                                     cTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCAt                               >  2:1234625/1‑100 (MQ=255)
                                                                      tGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTTCATCTATTTCTATAAACCCGCTCAtt                              >  2:1563148/1‑100 (MQ=255)
                                                                       gACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCAttt                             <  1:159775/100‑1 (MQ=255)
                                                                       gACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCAttt                             <  1:3385222/100‑1 (MQ=255)
                                                                         ccTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTg                           <  1:3003618/100‑1 (MQ=255)
                                                                           tctcATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTc                         <  1:3039179/100‑1 (MQ=255)
                                                                            ttcATTAATTGCACATGCCGGACGGCACTATTGTCGTACGGCCTTTTCCTCTCTTTCTCAGGTAAGTGCATACATTTCTCTAAACCCGCTCATTTTg                           >  2:3235339/2‑97 (MQ=255)
                                                                               aTTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTAtt                     >  1:754316/1‑100 (MQ=255)
                                                                               aTTAATTGCTCATGCCGGACGGCACTAGCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTGTAAACCCGCTCATTTTGTCTa                       <  2:321296/98‑1 (MQ=255)
                                                                                  aaTTGCTCATGCCGGACGGCACTATCGTCGTCCGGCATTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTAttttt                  <  2:327406/100‑1 (MQ=255)
                                                                                     tGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGc               <  1:1059081/100‑1 (MQ=255)
                                                                                     tGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGc               <  2:1187683/100‑1 (MQ=255)
                                                                                      gCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGca              >  1:2529231/1‑100 (MQ=255)
                                                                                      gCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGca              <  1:3542510/100‑1 (MQ=255)
                                                                                      gCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGca              >  2:2974107/1‑100 (MQ=255)
                                                                                       cTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTgttt             >  2:1682768/1‑97 (MQ=255)
                                                                                       cTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcac             <  1:2278996/100‑1 (MQ=255)
                                                                                       cTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcac             >  2:1825507/1‑100 (MQ=255)
                                                                                       cTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcac             <  1:694229/100‑1 (MQ=255)
                                                                                       cTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGc               <  2:435205/98‑1 (MQ=255)
                                                                                        tCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcaca            <  2:3725772/100‑1 (MQ=255)
                                                                                         cATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGcaca            >  1:1002854/1‑99 (MQ=255)
                                                                                         cATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACaa           >  1:1193314/1‑100 (MQ=255)
                                                                                         cATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACaa           >  2:3830607/1‑100 (MQ=255)
                                                                                          aTGCCGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatc          <  1:702351‑M2/100‑81 (MQ=255)
                                                                                          aTGCCGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatc          <  1:11110‑M2/100‑81 (MQ=255)
                                                                                           tGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAAc         <  1:992454/100‑1 (MQ=255)
                                                                                            gCCGGACGacgatagtgccgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatcac        <  1:3206265‑M1/100‑93 (MQ=255)
                                                                                            gCCGGACGacgatagtgccgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatcac        >  1:2480381‑M1/1‑8 (MQ=255)
                                                                                            gCCGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatcac        <  1:832236‑M2/100‑83 (MQ=255)
                                                                                            gCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACa        >  1:3861009/1‑100 (MQ=255)
                                                                                            gCCGGACAGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCCATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACa        <  2:2112323/100‑1 (MQ=255)
                                                                                             ccGGACGGCACTATCGTcgtccggcatgagcacttaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacttaacaggaagcacatcaca       <  2:1878868‑M2/100‑84 (MQ=255)
                                                                                             ccGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatcaca       <  2:1988171‑M2/100‑84 (MQ=255)
                                                                                             ccGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatcaca       <  1:169263‑M2/100‑84 (MQ=255)
                                                                                             ccGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatcaca       <  1:2756483‑M2/100‑84 (MQ=255)
                                                                                             ccGGACGGCACTATCGTcgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatca         <  2:2313256‑M2/98‑82 (MQ=255)
                                                                                             ccGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACAt       >  2:730055/1‑100 (MQ=255)
                                                                                                  cgacgatagtgccgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggcagcacatcaccaagac  >  1:1303101‑M1/1‑2 (MQ=255)
                                                                                                  cgacgatagtgccgtccggcatgagcaattaatgagaggtcagggtgttatgctgacggtgacggctgacgaaacctaacaggaagcacatcacaaagac  >  2:241165‑M1/1‑2 (MQ=255)
                                                                                                   |                                                                                                  
CTGTACGCTGTCGTCTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAAT  >  NC_000913/3493666‑3493863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.