Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,293,033	IS1 (+) +9 bp	intergenic (‑111/‑486)	hns ← / → tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1050545	NA (NA)	65 (0.830)	44/198	1.0	98.3%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	1293033 =	1 (0.010)					intergenic (‑111/‑494)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
*	?	NC_000913	= 1293041	1 (0.010)	95 (1.210)	72/198	0.0	98.9%	intergenic (‑119/‑486)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
	?	NC_000913	= 1979270	NA (NA)					noncoding (1/768 nt)	IS1	repeat region

ATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1292943‑1293041 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT  <  NC_000913/1979270‑1979174                                                                                                                                                                                                      ATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCG                                                                                                  >  2:699464/1‑100  TTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGG                                                                                                 <  2:347565/100‑1   TGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGT                                                                                                <  1:1583890/100‑1    GGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTG                                                                                               <  1:208943/100‑1    GGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTG                                                                                               >  2:162581/1‑100    GGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTG                                                                                               >  2:376335/1‑100     GGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGA                                                                                              <  1:668464/100‑1     GGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGA                                                                                              <  2:440860/100‑1      GGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGAT                                                                                             >  1:184523/1‑100        TGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGC                                                                                           <  1:376334/100‑1        TGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGC                                                                                           <  2:1948598/100‑1        TGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGC                                                                                           <  1:1160203/100‑1         GGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCT                                                                                          <  1:689100/100‑1         GGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCT                                                                                          >  1:1783483/1‑100          GTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTG                                                                                         >  2:1256351/1‑100           TTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGC                                                                                        <  2:503568/100‑1            TTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCC                                                                                       <  2:1957212/100‑1            TTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCC                                                                                       >  2:71441/1‑100             TGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCA                                                                                      <  2:1306736/100‑1               TTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAAC                                                                                    <  2:1796925/100‑1                TGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACT                                                                                   >  1:599110/1‑100                TGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACT                                                                                   >  1:1124453/1‑100                TGAGGTAATAATAGAGCCTCAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACT                                                                                   <  1:599423/100‑1                   GGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTAC                                                                                <  2:1377426/100‑1                   GGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTAC                                                                                <  1:373710/100‑1                     TAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTAC                                                                                >  1:1611607/1‑98                      AATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTG                                                                              >  2:1467671/1‑99                       ATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGAT                                                                            >  2:524101/1‑100                        TAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATT                                                                           >  1:291618/1‑100                         AATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTT                                                                          <  1:1851008/100‑1                         AATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAAGTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTT                                                                          <  2:1124448/100‑1                           TAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAG                                                                        >  2:1518127/1‑100                             GAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTn                                                                      <  1:917115/100‑2                             GAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                      <  1:1290575/100‑1                             GAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                      <  1:71440/100‑1                             GAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                      <  1:162580/100‑1                              AGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGT                                                                     <  2:426018/100‑1                               GCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTA                                                                    >  2:655632/1‑100                               GCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTA                                                                    <  2:465180/100‑1                                     AATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                              <  1:1168513/100‑1                                     AATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                              <  1:560295/100‑1                                      ATTCAGTTGTGCAATAGCCATGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT                                                             >  2:1234654/1‑100                                       TTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                            >  1:505247/1‑100                                       TTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                            <  2:1355701/100‑1                                              GTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA                                                     <  1:449521/100‑1                                               TGCAATAGCTAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                    <  2:170402/100‑1                                                GCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                   >  2:1078964/1‑100                                                GCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                   <  1:699464/100‑1                                                GCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                   <  1:1153230/100‑1                                                GCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                   <  1:432753/100‑1                                                 CAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                                  <  1:1435325/100‑1                                                 CAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                                  <  1:1435233/100‑1                                                   ATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC                                                >  2:1792296/1‑100                                                     AGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC                                              >  2:1974942/1‑100                                                      cttccgatctTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC                                             <  1:1880568/90‑1                                                      GCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC                                             <  1:282722/100‑1                                                        CAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                           <  2:1600379/100‑1                                                          GGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                         <  1:1518137/100‑1                                                            AATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC                                       >  1:776655/1‑100                                                               GTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                                    >  1:1643293/1‑100                                                                TAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGatcggaag                                   >  2:1880556/1‑92                                                                TAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT                                   <  2:451788/100‑1                                                                  AGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                                 >  2:1962542/1‑100                                                                    GAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                               <  2:431361/100‑1                                                                     AATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                              <  1:893877/100‑1                                                                     AATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                              <  1:1711411/100‑1                                                                     AATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                              <  2:741904/100‑1                                                                      ATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                             >  2:1019232/1‑100                                                                      ATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                             <  2:291619/100‑1                                                                       TTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGCTTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA                            >  2:695904/1‑100                                                                       TTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA                            <  1:1078969/100‑1                                                                        TCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                           >  1:620701/1‑100                                                                            AATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGC                       <  1:1569729/100‑1                                                                               TGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT                    <  2:599110/100‑1                                                                                GTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                   <  2:505248/100‑1                                                                                GTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                   >  2:718536/1‑100                                                                                GTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                   <  2:776653/100‑1                                                                                GTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                   <  1:189472/100‑1                                                                                 TTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC                  >  1:917771/1‑100                                                                                  TCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC                 >  1:928361/1‑100                                                                                   nTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT                >  2:1159246/2‑100                                                                                   CTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT                >  2:602767/1‑100                                                                                    TTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC               >  2:352369/1‑100                                                                                     TTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC              <  1:524100/100‑1                                                                                     TTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC              <  1:328980/100‑1                                                                                      TATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT             >  1:222909/1‑100                                                                                        TTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGT           <  1:1974954/100‑1                                                                                          TTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC         <  1:352368/100‑1                                                                                          TTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC         >  1:1493575/1‑100                                                                                           TGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA        <  1:1256356/100‑1                                                                                           TGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA        >  1:1551067/1‑100                                                                                             TGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC      <  2:1643281/100‑1                                                                                             TGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC      <  1:1156778/100‑1                                                                                                CGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC   <  2:620701/100‑1                                                                                                 GCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT  <  2:1493566/100‑1                                                                                                                                                                                                      ATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1292943‑1293041 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT  <  NC_000913/1979270‑1979174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.