Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 4,628,231 Δ14 bp coding (917‑930/1233 nt) nadR → trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 46282303 (0.040)80 (1.020) 56/198 0.3 97.6% coding (916/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 4628245 = 1 (0.010)coding (931/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor

GCGGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4628132‑4628230
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATC  >  NC_000913/4628245‑4628343
                                                                                                                                                                                                      
GCGGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGG                                                                                                    >  1:715835/1‑100
  GGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGAT                                                                                                  <  2:1478480/100‑1
     GATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTT                                                                                               >  1:1660141/1‑100
      ATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTG                                                                                              <  2:155225/100‑1
       TGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGT                                                                                             >  2:1676512/1‑100
         AGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCA                                                                                           <  2:279067/100‑1
         AGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCA                                                                                           <  2:1933321/100‑1
         AGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCA                                                                                           <  1:1998300/100‑1
         AGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCA                                                                                           >  1:1608675/1‑100
           ATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACC                                                                                         <  1:1558541/100‑1
            TCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCA                                                                                        <  1:242457/100‑1
               CATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTC                                                                                     >  2:677281/1‑100
                ATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCA                                                                                    <  2:1726888/100‑1
                 TTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAG                                                                                   <  1:1006670/100‑1
                  TGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGG                                                                                  <  2:832869/100‑1
                   GCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGC                                                                                 >  1:1450734/1‑100
                    CAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCG                                                                                <  1:536845/100‑1
                    CAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCG                                                                                >  1:271303/1‑100
                    CAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCG                                                                                <  2:1886923/100‑1
                    CAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCG                                                                                >  1:668599/1‑100
                    CAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCG                                                                                >  1:122903/1‑100
                        ATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCT                                                                            >  2:1286127/1‑100
                        ATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCT                                                                            >  1:162175/1‑100
                          TCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGC                                                                          <  2:1498052/100‑1
                          TCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGC                                                                          <  2:1450725/100‑1
                           CTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGTTTTTGTCACCACTCAGTCGTTCTGC                                                                          >  1:658413/1‑99
                               CTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAA                                                                     <  1:1558191/100‑1
                                TACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAG                                                                    <  2:1665422/100‑1
                                TACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAG                                                                    <  2:1647651/100‑1
                                 ACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGT                                                                   >  1:1231679/1‑100
                                 ACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGT                                                                   >  1:402165/1‑100
                                  CGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTA                                                                  >  2:718099/1‑100
                                  CGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTA                                                                  <  2:5883/100‑1
                                   GATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTAC                                                                 >  2:1385027/1‑100
                                    ATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACG                                                                <  1:1836151/100‑1
                                       AAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAG                                                             >  2:1132378/1‑100
                                        AATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGG                                                            >  2:1555927/1‑100
                                            GCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGG                                                        <  1:1576814/100‑1
                                             CGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGG                                                       <  2:715834/100‑1
                                                TGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAAC                                                    <  1:1197736/100‑1
                                                   GCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATC                                                 >  2:1025559/1‑100
                                                   GCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATC                                                 >  2:327583/1‑100
                                                    CCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCC                                                >  1:1814575/1‑100
                                                     CACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCG                                               <  2:1759359/100‑1
                                                       CGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTT                                             >  1:1006438/1‑100
                                                       CGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTT                                             <  2:1608663/100‑1
                                                         CTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCG                                           <  1:1555938/100‑1
                                                          TCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGT                                          >  2:529308/1‑100
                                                            AATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGC                                        <  1:849501/100‑1
                                                             ATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCA                                       >  1:1607445/1‑100
                                                             ATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCA                                       >  2:1982018/1‑100
                                                             ATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCA                                       >  2:1900965/1‑100
                                                                 ATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCG                                   >  1:1900395/1‑100
                                                                 ATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCG                                   >  1:1170515/1‑100
                                                                 ATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCG                                   >  1:101549/1‑100
                                                                 ATTGATTTTGCGGTGAAATATGCCAATAAAGTGGGATGTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCG                                   >  2:1084839/1‑100
                                                                   ttATTTTGCGGTGAAATATGCCCATAAAGCGGGATTTTGGCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATGCGTTCGTGCAGGCGCT                                 <  2:1618614/98‑1
                                                                     ATTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGatcacc                               >  2:1138282/1‑94
                                                                      TTTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGAT                              <  1:529307/100‑1
                                                                       TTTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATT                             <  1:1286133/100‑1
                                                                        TTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTG                            <  1:1676524/100‑1
                                                                        TTGCGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTG                            <  2:101550/100‑1
                                                                           CGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATG                         <  1:717723/100‑1
                                                                           CGGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATG                         <  2:1814563/100‑1
                                                                            GGTGAAATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGA                        >  2:326118/1‑100
                                                                                  ATATGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCG                  <  1:327582/100‑1
                                                                                     TGCCAATAAAGTGGGTTTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTT               <  1:1982030/100‑1
                                                                                     TGCCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTT               <  2:402166/100‑1
                                                                                       CCAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCG             >  2:745173/1‑100
                                                                                        CAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGA            >  1:733521/1‑100
                                                                                        CAATAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGA            >  1:1437120/1‑100
                                                                                           TAAAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCT         <  2:1969475/100‑1
                                                                                             AAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGG       <  2:270860/100‑1
                                                                                             AAGTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGG       <  2:547407/100‑1
                                                                                               GTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTG     >  2:1329294/1‑100
                                                                                               GTGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTG     >  2:1204520/1‑100
                                                                                                TGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGA    <  1:677281/100‑1
                                                                                                TGGGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGCTTCGATCTGGTGA    <  1:1353079/100‑1
                                                                                                  GGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATC  >  1:559064/1‑100
                                                                                                  GGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCCGGTGATC  >  2:657422/1‑100
                                                                                                                                                                                                      
GCGGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4628132‑4628230
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATC  >  NC_000913/4628245‑4628343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.