| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,628,231 | Δ14 bp | coding (917‑930/1233 nt) | nadR → | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4628230 | 3 (0.040) | 80 (1.020) | 56/198 | 0.3 | 97.6% | coding (916/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| ? | NC_000913 | 4628245 = | 1 (0.010) | coding (931/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor | |||||
GCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCC > NC_000913/4628146‑4628344 | gcggtgatgagatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggg > 1:715835‑M2/100‑100 (MQ=255) ggtgatgagatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGAt < 2:1478480‑M2/3‑1 (MQ=255) gatgagatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGAtttt > 1:1660141‑M2/95‑100 (MQ=255) atgagatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTg < 2:155225‑M2/7‑1 (MQ=255) tgagatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGt > 2:1676512‑M2/93‑100 (MQ=255) agatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTca < 2:279067‑M2/10‑1 (MQ=255) agatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTca < 2:1933321‑M2/10‑1 (MQ=255) agatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTca < 1:1998300‑M2/10‑1 (MQ=255) agatcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTca > 1:1608675‑M2/91‑100 (MQ=255) atcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTcacc < 1:1558541‑M2/12‑1 (MQ=255) tcgcattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTcacca < 1:242457‑M2/13‑1 (MQ=255) cattgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTc > 2:677281‑M2/85‑100 (MQ=255) attgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCa < 2:1726888‑M2/17‑1 (MQ=255) ttgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAg < 1:1006670‑M2/18‑1 (MQ=255) tgcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAgg < 2:832869‑M2/19‑1 (MQ=255) gcagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGc > 1:1450734‑M2/81‑100 (MQ=255) cagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCg > 1:668599‑M2/80‑100 (MQ=255) cagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCg > 1:122903‑M2/80‑100 (MQ=255) cagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCg < 1:536845‑M2/21‑1 (MQ=255) cagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCg > 1:271303‑M2/80‑100 (MQ=255) cagtattctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCg < 2:1886923‑M2/21‑1 (MQ=255) attctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCt > 2:1286127‑M2/76‑100 (MQ=255) attctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCt > 1:162175‑M2/76‑100 (MQ=255) tctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGc < 2:1450725‑M2/27‑1 (MQ=255) tctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGc < 2:1498052‑M2/27‑1 (MQ=255) ctgactacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGTTTTTGTCACCACTCAGTCGTTCTGc > 1:658413‑M2/73‑99 (MQ=255) ctacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCaaaaa < 1:1558191‑M2/32‑1 (MQ=255) tacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAg < 2:1665422‑M2/33‑1 (MQ=255) tacgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAg < 2:1647651‑M2/33‑1 (MQ=255) acgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGt > 1:402165‑M2/67‑100 (MQ=255) acgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGt > 1:1231679‑M2/67‑100 (MQ=255) cgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTa < 2:5883‑M2/35‑1 (MQ=255) cgataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTa > 2:718099‑M2/66‑100 (MQ=255) gataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTAc > 2:1385027‑M2/65‑100 (MQ=255) ataaaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACg < 1:1836151‑M2/37‑1 (MQ=255) aaatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAg > 2:1132378‑M2/61‑100 (MQ=255) aatcgcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAgg > 2:1555927‑M2/60‑100 (MQ=255) gcgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCgg < 1:1576814‑M2/45‑1 (MQ=255) cgctgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCggg < 2:715834‑M2/46‑1 (MQ=255) tgggccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAAc < 1:1197736‑M2/49‑1 (MQ=255) gccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATc > 2:1025559‑M2/49‑100 (MQ=255) gccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATc > 2:327583‑M2/49‑100 (MQ=255) ccacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATcc > 1:1814575‑M2/48‑100 (MQ=255) cacgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCg < 2:1759359‑M2/54‑1 (MQ=255) cgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGtt < 2:1608663‑M2/56‑1 (MQ=255) cgctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGtt > 1:1006438‑M2/45‑100 (MQ=255) ctcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCg < 1:1555938‑M2/58‑1 (MQ=255) tcaatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGt > 2:529308‑M2/42‑100 (MQ=255) aatacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc < 1:849501‑M2/61‑1 (MQ=255) atacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCa > 1:1607445‑M2/39‑100 (MQ=255) atacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCa > 2:1982018‑M2/39‑100 (MQ=255) atacattgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCa > 2:1900965‑M2/39‑100 (MQ=255) attgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGgcg > 1:1170515‑M2/35‑100 (MQ=255) attgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGgcg > 1:101549‑M2/35‑100 (MQ=255) attgattttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGgcg > 1:1900395‑M2/35‑100 (MQ=255) attgattttgcggtgaaatatgccaataaagtggGATGTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGgcg > 2:1084839‑M2/35‑100 (MQ=255) ttattttgcggtgaaatatgcccataaagcggGATTTTGGCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATGCGTTCGTGCAGGCGCt < 2:1618614‑M2/68‑1 (MQ=255) attttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTcgtgcaggatcacc > 2:1138282‑M2/31‑94 (MQ=255) ttttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgat < 1:529307‑M2/71‑1 (MQ=255) tttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgatt < 1:1286133‑M2/72‑1 (MQ=255) ttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgattg < 1:1676524‑M2/73‑1 (MQ=255) ttgcggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgattg < 2:101550‑M2/73‑1 (MQ=255) cggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATtgatg < 1:717723‑M2/76‑1 (MQ=255) cggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATtgatg < 2:1814563‑M2/76‑1 (MQ=255) ggtgaaatatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATtgatga > 2:326118‑M2/24‑100 (MQ=255) atatgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCg < 1:327582‑M2/83‑1 (MQ=255) ggCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCg > 2:713526/1‑99 (MQ=255) tgccaataaagtggGTTTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGttt < 1:1982030‑M2/86‑1 (MQ=255) tgccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGttt < 2:402166‑M2/86‑1 (MQ=255) ccaataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCg > 2:745173‑M2/13‑100 (MQ=255) caataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGa > 1:1437120‑M2/12‑100 (MQ=255) caataaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGa > 1:733521‑M2/12‑100 (MQ=255) taaagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCt < 2:1969475‑M2/92‑1 (MQ=255) aagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTgg < 2:270860‑M2/94‑1 (MQ=255) aagtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTgg < 2:547407‑M2/94‑1 (MQ=255) gtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTg > 2:1329294‑M2/5‑100 (MQ=255) gtggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTg > 2:1204520‑M2/5‑100 (MQ=255) tggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGa < 1:677281‑M2/97‑1 (MQ=255) tggGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGCTTCGATCTGGTGa < 1:1353079‑M2/97‑1 (MQ=255) gGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATc > 1:559064‑M2/2‑100 (MQ=255) gGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCCGGTGATc > 2:657422‑M2/2‑100 (MQ=255) gATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATcc < 1:1025563/100‑1 (MQ=255) | GCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCC > NC_000913/4628146‑4628344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |