New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2568139 =NA (NA)8 (0.070) 7/164 NT NA noncoding (1/183 nt) REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 2568169 = NA (NA)noncoding (31/183 nt) REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 196 total aligned reads displayed.

ATCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACT  >  NC_000913/2568040‑2568238
                                                                                                   |                                                                                                   
gcggataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagg                                                                                                     <  1:1442309‑M1/1‑1 (MQ=255)
gcggataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagg                                                                                                     <  1:3272769‑M1/1‑1 (MQ=255)
 tCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTgg                                                                                                    <  1:886238/100‑1 (MQ=255)
 ctgataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtaggg                                                                                                    >  2:2706402‑M1/99‑100 (MQ=255)
 cggataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtaggg                                                                                                    <  2:1688433‑M1/2‑1 (MQ=255)
  ccTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGc                                                                                                   <  1:2992588/100‑1 (MQ=255)
   gataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacggttgccgcgtcttatccagcctacgggattgcacatgtagGGCg                                                                                                  <  2:2326031‑M1/4‑1 (MQ=255)
   gataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagggag                                                                                                  <  1:2706420‑M1/4‑3 (MQ=255)
   gataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCg                                                                                                  >  1:2699585‑M1/97‑100 (MQ=255)
   cTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCg                                                                                                  >  2:2679098/1‑100 (MQ=255)
   cTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCg                                                                                                  >  1:3630971/1‑100 (MQ=255)
   cTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCACATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCg                                                                                                  >  2:1445480/1‑100 (MQ=255)
     taaggggttcccgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGa                                                                                                >  2:3528175‑M1/95‑100 (MQ=255)
       cTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATg                                                                                              <  2:102588/100‑1 (MQ=255)
       cTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATg                                                                                              >  2:1321718/1‑100 (MQ=255)
       cTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATg                                                                                              >  1:1556532/1‑100 (MQ=255)
        tACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgc                                                                                             >  1:337677/1‑100 (MQ=255)
          cGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcgg                                                                                           <  1:3014341/100‑1 (MQ=255)
          cGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcgg                                                                                           <  2:2356137/100‑1 (MQ=255)
          cGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcgg                                                                                           <  2:429063/100‑1 (MQ=255)
           ggCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcggc                                                                                          >  1:1290575/1‑100 (MQ=255)
             cAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGt                                                                                        <  2:1009841/100‑1 (MQ=255)
                cTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTaaa                                                                                     <  1:1258050/100‑1 (MQ=255)
                cTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTaaa                                                                                     <  2:50826/100‑1 (MQ=255)
                cTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTaaa                                                                                     >  1:709613/1‑100 (MQ=255)
                cTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTaaa                                                                                     <  2:1862406/100‑1 (MQ=255)
                 tagcAGCATAAAGAACAGCATGATGTACATGATGATGTGGTTAATTCCCATCGCCTTTACTCCCTGAGAGTTGTTATGTATTGGCGGATgtggc                                                                                          >  2:730247/4‑94 (MQ=255)
                 tATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAAc                                                                                    >  1:3174209/1‑100 (MQ=255)
                  aTCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACg                                                                                   <  1:151574/100‑1 (MQ=255)
                     aGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCt                                                                                <  1:223720/100‑1 (MQ=255)
                     aGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCt                                                                                >  1:3442268/1‑100 (MQ=255)
                         cgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATc                                                                            >  1:2950244‑M1/75‑100 (MQ=255)
                           aaGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCg                                                                          >  1:967678/1‑100 (MQ=255)
                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGcc                                                                        >  2:1733455/1‑100 (MQ=255)
                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGcc                                                                        <  1:630054/100‑1 (MQ=255)
                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGcc                                                                        <  1:35075/100‑1 (MQ=255)
                             agtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGc                                                                         >  2:413191‑M1/71‑99 (MQ=255)
                              gtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                       >  1:2609105‑M1/70‑100 (MQ=255)
                              gtggcgcggtgcaattgccggaggcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGcc                                                                        >  2:336488‑M1/70‑99 (MQ=255)
                               aCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                       <  1:49600/99‑1 (MQ=255)
                               aCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                      <  1:1852636/100‑1 (MQ=255)
                               aCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                      <  2:36284/100‑1 (MQ=255)
                                catcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATAAGGCGTTTACGCCGCATCCGccaat                                                                     <  2:3004124/100‑4 (MQ=25)
                                 atcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTAc                                                                    >  1:1612863/1‑100 (MQ=255)
                                  tcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                   <  2:2625563/100‑1 (MQ=255)
                                   catGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAt                                                                  <  1:1966990/100‑1 (MQ=255)
                                    atgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtg                                                                 <  2:2202580/100‑1 (MQ=255)
                                    atgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtg                                                                 <  1:2327494/100‑1 (MQ=255)
                                    atgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtg                                                                 >  1:1772829/1‑100 (MQ=255)
                                     tgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgt                                                                >  1:3095008/1‑100 (MQ=255)
                                      gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                               >  2:2490410/1‑100 (MQ=255)
                                      gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCAGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                               <  2:1109988/100‑1 (MQ=255)
                                       tacatcATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                               >  1:2023217/6‑99 (MQ=255)
                                        tgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                             <  1:334825/100‑1 (MQ=255)
                                             atgatgATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATccc                                                        >  1:1190890/1‑100 (MQ=255)
                                              tgatgaTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCg                                                       >  1:3402482/1‑100 (MQ=255)
                                               gatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGt                                                      >  1:3152398/1‑100 (MQ=255)
                                                 tgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAg                                                    >  2:3419393/1‑100 (MQ=255)
                                                   atTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGc                                                  >  1:1312077/1‑100 (MQ=255)
                                                   atTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATCCGGCGTAAACGCCTTATCCGCCCTACATGTCCAATCCCGTAGGc                                                  >  2:1492639/1‑100 (MQ=255)
                                                    tttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCt                                                 >  2:3345355/1‑100 (MQ=255)
                                                    tttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCt                                                 <  1:113949/100‑1 (MQ=255)
                                                      tCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTgg                                               <  2:1225716/100‑1 (MQ=255)
                                                      tCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTgg                                               >  1:2426133/1‑100 (MQ=255)
                                                      tCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTg                                                >  2:873867/1‑99 (MQ=255)
                                                       ttccgatctccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGa                                              <  1:1602321/91‑1 (MQ=255)
                                                       cGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGa                                              <  1:775044/100‑1 (MQ=255)
                                                        gTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                             >  1:1039238/1‑100 (MQ=255)
                                                        gTTAATTCCCATCGCCTGGACTCCCTGTTAGTTGTTAGTTATCGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                             <  2:2564287/100‑1 (MQ=21)
                                                             ttCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAc                                        >  2:1039671/1‑100 (MQ=255)
                                                               cccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgc                                      >  1:1041387/1‑100 (MQ=255)
                                                                ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGaagatcggaa                                     >  2:1602313/1‑91 (MQ=255)
                                                                ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgcg                                     >  2:1839553/1‑100 (MQ=255)
                                                                ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgcg                                     >  2:241547/1‑100 (MQ=255)
                                                                  aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                   >  2:2835038/1‑100 (MQ=255)
                                                                  aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                   <  2:967671/100‑1 (MQ=255)
                                                                  aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                   <  2:1529038/100‑1 (MQ=255)
                                                                  aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                   <  1:823159/100‑1 (MQ=255)
                                                                    cGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTACACGCCTTATCCGCCCTACATGTGCAATTCAGTAGGCTGGATAAGACGCGGc                                   >  2:3075308/1‑98 (MQ=255)
                                                                      ccTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGc                               <  2:141281/100‑1 (MQ=255)
                                                                       cTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCg                              <  1:2830401/100‑1 (MQ=255)
                                                                        atccagcctacgggattgcacatgtagGGCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAagcat                             <  1:207313‑M1/73‑3 (MQ=255)
                                                                         ttACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTc                            <  1:1894706/100‑1 (MQ=255)
                                                                          tACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCg                           <  1:1745874/100‑1 (MQ=255)
                                                                           aCTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCACGCGTGGc                          >  1:1678526/1‑100 (MQ=255)
                                                                            cacccTATTAGTTGTTATTTATTGGCGGGTGCGGCGTACGCGCCTTATCCGCCCTACATGTGCAGTCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGc                          <  2:3294811/97‑1 (MQ=18)
                                                                              cccTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATc                       <  1:3546654/100‑1 (MQ=255)
                                                                                   ttAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCa                  <  1:2777314/100‑1 (MQ=255)
                                                                                    tAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCaa                 >  2:175720/1‑100 (MQ=255)
                                                                                      gttgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAtt               >  1:3233343/1‑100 (MQ=255)
                                                                                      gttgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAtt               <  2:611336/100‑1 (MQ=255)
                                                                                         gttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTg              >  2:713675/1‑98 (MQ=255)
                                                                                           tatttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAcc          >  2:3272744/1‑100 (MQ=255)
                                                                                            atttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAtagatcgg         >  2:2907244/1‑93 (MQ=255)
                                                                                             tttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcgc        >  1:96231/1‑100 (MQ=255)
                                                                                              ttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcgcg       <  2:83291/100‑1 (MQ=255)
                                                                                               tattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCACGCGTCGCATCCCGCACTTGCa            >  2:3140089/1‑94 (MQ=255)
                                                                                                 tgGGCGGATGCGGAGTAAACGCCTTATCCGCCCTACATGTGCGATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCa    <  1:2467359‑M1/98‑1 (MQ=255)
                                                                                                  tGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCATCGCATCCGGCAATTGCACCGCGcc     >  2:663449/1‑98 (MQ=255)
                                                                                                   GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGGGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTACACCGCGCCa    <  2:1942532‑M1/98‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACT  >  NC_000913/2568040‑2568238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.