New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2568139 =NA (NA)8 (0.070) 7/164 NT NA noncoding (1/183 nt) REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 2568169 = NA (NA)noncoding (31/183 nt) REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 176 total aligned reads displayed.

ACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGC  >  NC_000913/2568071‑2568267
                                                                                                  |                                                                                                  
tggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggatcgcacatgtagggcggataaggcgtttactccgcatccgccca                                                                                                   <  1:2467359‑M2/2‑2 (MQ=255)
aCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                                                   <  1:1852636/100‑1 (MQ=255)
aCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                                                   >  1:36284/1‑100 (MQ=255)
 catcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                                                  <  2:2895830/100‑1 (MQ=255)
   tcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                                                <  2:2625563/100‑1 (MQ=255)
     atgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtg                                                                                              <  2:2202580/100‑1 (MQ=255)
      tgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgt                                                                                             >  1:3095008/1‑100 (MQ=255)
       gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                                                            >  2:2490410/1‑100 (MQ=255)
       gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCAGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                                                            <  2:1109988/100‑1 (MQ=255)
           tACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAt                                                                                        >  2:1718641/1‑100 (MQ=255)
             cATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATcc                                                                                      <  1:984890/100‑1 (MQ=255)
              atgatgATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATccc                                                                                     >  1:1190890/1‑100 (MQ=255)
              atgatgATTTCGTTAATTCCAATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATccc                                                                                     >  1:3377276/1‑100 (MQ=255)
               tgatgaTTTCGTGAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCg                                                                                    >  1:2391091/1‑100 (MQ=255)
                gatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGt                                                                                   >  1:3152398/1‑100 (MQ=255)
                gatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGt                                                                                   >  1:1138305/1‑100 (MQ=255)
                 atgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTa                                                                                  <  1:2045995/100‑1 (MQ=255)
                  tgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAg                                                                                 >  2:3419393/1‑100 (MQ=255)
                   gatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAgg                                                                                <  1:1965203/100‑1 (MQ=255)
                    atTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATCCGGCGTAAACGCCTTATCCGCCCTACATGTCCAATCCCGTAGGc                                                                               >  2:1492639/1‑100 (MQ=255)
                     tttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCt                                                                              >  2:1304220/1‑100 (MQ=255)
                     tttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCt                                                                              >  1:3251019/1‑100 (MQ=255)
                      ttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTg                                                                             <  1:1807348/100‑1 (MQ=255)
                       tCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTgg                                                                            >  1:2426133/1‑100 (MQ=255)
                       tCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTg                                                                             >  2:873867/1‑99 (MQ=255)
                        cGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGa                                                                           >  1:120652/1‑100 (MQ=255)
                         gTTAATTCCCATCGCCTTTCCGCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                                                          <  2:707717/100‑1 (MQ=255)
                         gTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                                                          >  1:1039238/1‑100 (MQ=255)
                          ttAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATa                                                                         <  1:3419418/100‑1 (MQ=255)
                            aaTTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAg                                                                       <  2:1039230/100‑1 (MQ=255)
                                cccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgc                                                                   >  1:1041387/1‑100 (MQ=255)
                                 ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGaagatcggaa                                                                  >  2:1602313/1‑91 (MQ=255)
                                 ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgcg                                                                  >  2:241547/1‑100 (MQ=255)
                                  cATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCgg                                                                 <  1:3359742/100‑1 (MQ=255)
                                   aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                                                <  1:823159/100‑1 (MQ=255)
                                   aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                                                <  2:967671/100‑1 (MQ=255)
                                    tCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCa                                                               >  1:175405/1‑100 (MQ=255)
                                     cGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTACACGCCTTATCCGCCCTACATGTGCAATTCAGTAGGCTGGATAAGACGCGGc                                                                >  2:3075308/1‑98 (MQ=255)
                                       ccTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGc                                                            <  2:141281/100‑1 (MQ=255)
                                        cTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCg                                                           <  1:2830401/100‑1 (MQ=255)
                                        cTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCg                                                           >  2:3593513/1‑100 (MQ=255)
                                         atccagcctacgggattgcacatgtagGGCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAagcat                                                          <  1:207313‑M1/73‑3 (MQ=255)
                                           tACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCg                                                        <  1:1745518/100‑1 (MQ=255)
                                           tACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCg                                                        <  1:2316431/100‑1 (MQ=255)
                                            aCTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCACGCGTGGc                                                       >  1:1678526/1‑100 (MQ=255)
                                             cacccTATTAGTTGTTATTTATTGGCGGGTGCGGCGTACGCGCCTTATCCGCCCTACATGTGCAGTCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGc                                                       <  2:3294811/97‑1 (MQ=18)
                                              tCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCAt                                                     <  2:3162271/100‑1 (MQ=255)
                                               cccTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATc                                                    >  1:1665035/1‑100 (MQ=255)
                                               cccTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATc                                                    <  1:3546654/100‑1 (MQ=255)
                                                   gTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGc                                                <  2:307212/100‑1 (MQ=255)
                                                   gTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGc                                                <  1:196740/100‑1 (MQ=255)
                                                     tAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCaa                                              <  2:415766/100‑1 (MQ=255)
                                                     tAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCaa                                              >  2:175720/1‑100 (MQ=255)
                                                     ggattgcacatgtagggcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCCGTAGGCTGGATAAGCCGCGGCAAGCGTCGCATCCgg                                                 >  2:449752‑M2/46‑97 (MQ=255)
                                                       gttgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAtt                                            <  1:793047/100‑1 (MQ=255)
                                                       gttgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAtt                                            <  2:611336/100‑1 (MQ=255)
                                                         tgttATTTATTGGCGGGTGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGc                                          <  1:133519/100‑1 (MQ=255)
                                                          gttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTg                                           >  2:713675/1‑98 (MQ=255)
                                                          gttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCa                                         >  1:762677/1‑100 (MQ=255)
                                                           ttatttatTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCATTTGAAc                                        >  2:1067324/1‑100 (MQ=255)
                                                            tatttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCaga                                       >  1:645697/1‑98 (MQ=255)
                                                            tatttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAcc                                       >  2:1442301/1‑100 (MQ=255)
                                                            tatttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAcc                                       >  1:1495933/1‑100 (MQ=255)
                                                            tatttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAcc                                       >  2:3272744/1‑100 (MQ=255)
                                                             atttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAcc                                       >  1:1608685/1‑99 (MQ=255)
                                                                 aatGGCGGATGCGGCGTAAACGCCTTCTCCGCCCTACATGTGCAATCCCGTAGGCTGGCTAAGACGCACCAAGCGTCGCACCCGGCAAttatacc                                       >  2:2048774/3‑90 (MQ=11)
                                                                  ttGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCa                                 <  1:3290781/100‑1 (MQ=255)
                                                                   tGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCAc                                >  1:2444120/1‑100 (MQ=255)
                                                                   gggcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCAc                                >  1:2609105‑M2/32‑100 (MQ=255)
                                                                    ggcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCCTCCGGCAATTGCACCGCGCCAc                                >  2:336488‑M2/31‑99 (MQ=255)
                                                                    ggcggataaggcgtttacgccgcatccgccCCACATGTGCAATCCCGTAGGCTGGATACGACGCGGCAAGCTTCGCATCCGGCAATTGCACCGCGcc                                  >  2:1860374‑M2/31‑97 (MQ=255)
                                                                    GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAGTCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt                               <  2:1881527‑M1/100‑1 (MQ=255)
                                                                      CGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTgg                             >  1:29342‑M1/1‑100 (MQ=255)
                                                                       GGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGc                            >  1:3524264‑M1/1‑100 (MQ=255)
                                                                       GGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGc                            >  2:489666‑M1/1‑100 (MQ=255)
                                                                        gataaggcgtttacgccgcatccgccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCg                           >  1:2950244‑M2/27‑100 (MQ=255)
                                                                            cggcgTAAACGCCTTATCCGCCCTACATGTGTAATCCCGTAGGATGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGAt                        <  2:2553990/99‑1 (MQ=255)
                                                                            cggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATg                       >  2:2907905/1‑100 (MQ=255)
                                                                              gcgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATgcg                     >  1:3114957/1‑100 (MQ=255)
                                                                              gcgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGAGgcg                     >  2:2793083/1‑100 (MQ=255)
                                                                                gTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATgcggc                   <  2:1142252/100‑1 (MQ=255)
                                                                                 tAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATgcggcn                  <  2:331872/100‑2 (MQ=255)
                                                                                 tAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATgcggcg                  <  2:175405/100‑1 (MQ=255)
                                                                                  aaaCGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGt                 >  1:1518558/1‑100 (MQ=255)
                                                                                    aCGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGa               <  1:2577906/100‑1 (MQ=255)
                                                                                     cGCCTTATGCGCCCTAGATGTACACTGCCGTAGGATTGAGAAGACGCGGAGAGCGACGCATCCGGCAATTGCACCGCGCTTCTGGTGGATGCGGCGTGaa              <  2:650755/100‑1 (MQ=16)
                                                                                     cGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGaa              >  1:2908073/1‑100 (MQ=255)
                                                                                     cGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGaa              >  1:1431643/1‑100 (MQ=255)
                                                                                       ccTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACg            <  1:2167856/100‑1 (MQ=255)
                                                                                         ttATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGcc          >  1:1141591/1‑100 (MQ=255)
                                                                                          tATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCCCCGCGCCACTGGCGGAAGCGGCGTGAACGcc          >  1:476066/1‑99 (MQ=255)
                                                                                            tccgccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTa       >  2:2745181‑M2/7‑100 (MQ=255)
                                                                                            tccgccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGGGAACCCCTTa       >  2:3528175‑M2/7‑100 (MQ=255)
                                                                                             ccgccCTACATGTGCAATCCCGTAGGCTGGATAAGACACGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTAt      >  1:2758469‑M2/6‑100 (MQ=255)
                                                                                              cgccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc     >  1:2699585‑M2/5‑100 (MQ=255)
                                                                                              cgccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAACCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc     <  2:2326031‑M2/96‑1 (MQ=255)
                                                                                               gccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATcc    <  2:813252‑M2/97‑1 (MQ=255)
                                                                                                ccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCg   >  2:382777‑M2/3‑100 (MQ=255)
                                                                                                ccCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCg   <  2:1688433‑M2/98‑1 (MQ=255)
                                                                                                 cCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGc  <  1:1556309‑M2/99‑1 (MQ=255)
                                                                                                  |                                                                                                  
ACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGC  >  NC_000913/2568071‑2568267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.