New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3470738 =NA (NA)6 (0.050) 4/168 NT NA coding (592/1185 nt) tufA translation elongation factor EF‑Tu 1
?NC_000913 3470767 = NA (NA)coding (563/1185 nt) tufA translation elongation factor EF‑Tu 1

Only 100 of 140 total aligned reads displayed.

CCGGTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTGTCG  >  NC_000913/3470641‑3470832
                                                                                                 |                                                                                              
ccGGTAACAACGGTACCATGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAAt                                                                                              >  2:2640924/1‑100 (MQ=18)
ccGGTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAAt                                                                                              >  1:1365880/1‑100 (MQ=33)
  ggTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATcc                                                                                            <  2:1043481/100‑1 (MQ=33)
    tAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAg                                                                                          >  1:1212354/1‑100 (MQ=33)
     aacaacGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAgg                                                                                         <  1:2381195/100‑1 (MQ=33)
     aacaacGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAgg                                                                                         <  1:1464295/100‑1 (MQ=33)
       caacGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGaa                                                                                       >  1:3079349/1‑100 (MQ=33)
        aacGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAag                                                                                      >  2:3541544/1‑100 (MQ=32)
        aacGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAag                                                                                      <  2:1017794/100‑1 (MQ=33)
         acGGTACCACGACCGGAGATGGAGCATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAAGCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAagc                                                                                     >  1:1094818/1‑100 (MQ=12)
            gTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAagccag                                                                                  <  2:2215164/100‑1 (MQ=33)
              aCCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAagccagcc                                                                                >  2:1889775/1‑100 (MQ=33)
              aCCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAagccagcc                                                                                <  2:3516279/100‑1 (MQ=33)
              aCCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAagccagcc                                                                                <  1:667819/100‑1 (MQ=32)
               ccACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAgccagcca                                                                               >  1:81750/1‑100 (MQ=33)
               ccACGACCGGAGATGGAGAATACGTATTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAgccagcca                                                                               >  2:1803466/1‑100 (MQ=17)
                 aCGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGt                                                                             <  2:2922299/100‑1 (MQ=33)
                    aCCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTcc                                                                          >  2:2909156/1‑100 (MQ=32)
                    aCCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTcc                                                                          <  2:2817526/100‑1 (MQ=32)
                     ccGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCa                                                                         <  1:1717580/100‑1 (MQ=33)
                     ccGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCa                                                                         <  2:1635884/100‑1 (MQ=33)
                     ccGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCa                                                                         <  1:1717286/100‑1 (MQ=32)
                      tggAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAg                                                                        <  2:2787961/99‑1 (MQ=18)
                      cGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAg                                                                        <  2:1402396/100‑1 (MQ=33)
                      cGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAg                                                                        <  2:1350108/100‑1 (MQ=32)
                       ggAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAga                                                                       >  1:2787980/1‑99 (MQ=18)
                           aTGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAttt                                                                   <  2:2589880/100‑1 (MQ=33)
                            tGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAtttt                                                                  >  1:363261/1‑100 (MQ=32)
                             ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAATTCCAGGATTTTc                                                                 <  2:2257254/100‑1 (MQ=18)
                              gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                                >  2:1895990/1‑100 (MQ=33)
                              gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                                <  2:147065/100‑1 (MQ=33)
                              gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCAAGCCAGTTCCAGGATTTTCg                                                                <  1:730473/100‑1 (MQ=17)
                                gaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCt                                                              >  2:757162/1‑100 (MQ=32)
                                gaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCt                                                              <  1:83522/100‑1 (MQ=33)
                                  aTACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTc                                                            <  1:3467096/100‑1 (MQ=32)
                                   tACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTcc                                                           <  2:2777281/100‑1 (MQ=33)
                                    aCGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTccc                                                          <  1:1160785/100‑1 (MQ=33)
                                     cGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCa                                                         >  2:1405992/1‑100 (MQ=32)
                                       tCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCAct                                                       >  2:1473116/1‑100 (MQ=32)
                                       tCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCAct                                                       >  1:1886525/1‑100 (MQ=33)
                                         ttCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActc                                                      >  2:2181818/1‑99 (MQ=33)
                                          tCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTg                                                    >  2:2431150/1‑100 (MQ=33)
                                          tCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTg                                                    >  2:3124200/1‑100 (MQ=32)
                                          tCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTg                                                    <  2:3077882/100‑1 (MQ=33)
                                            ggtCGGCAGCAGGCACGGCTTGTCAATCGCAGGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                  >  1:2455320/3‑100 (MQ=255)
                                            gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                  >  1:1873491/1‑100 (MQ=33)
                                            gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                  >  1:455082/1‑100 (MQ=32)
                                            gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                  >  1:3318174/1‑100 (MQ=33)
                                            gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                  <  1:218987/100‑1 (MQ=33)
                                              tCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTc                                                <  2:1050492/100‑1 (MQ=33)
                                               cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                               <  1:2394653/100‑1 (MQ=33)
                                               cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                               <  1:91744/100‑1 (MQ=33)
                                               cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                               <  2:3325429/100‑1 (MQ=33)
                                               cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                               >  1:2795829/1‑100 (MQ=33)
                                                ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                              >  1:1811323/1‑100 (MQ=33)
                                                ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                              >  2:861077/1‑100 (MQ=32)
                                                 gcagcaGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcc                                             >  2:956348/1‑100 (MQ=32)
                                                  cagcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcag                                            >  1:1004661/1‑98 (MQ=18)
                                                   agcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCtt                                           <  2:1501946/100‑1 (MQ=33)
                                                    gcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAATTTCGCTTCCCACTCTGCGTCGcc                                             >  1:2343451/1‑97 (MQ=17)
                                                     cagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTcc                                         >  2:799578/1‑100 (MQ=32)
                                                     cagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGCCGCCTTcc                                         <  1:3613995/100‑1 (MQ=18)
                                                     cagGAACGGCTTGTCAAACGCACGCTCTGGTTCCGGAATATAAGAATCCAGAACACCCGCCAGTTCCAGCCGTTTCGCTTCCCCCGATGCGTCGCCTTcc                                         >  2:2970100/1‑100 (MQ=11)
                                                       ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                       >  1:2076925/1‑100 (MQ=33)
                                                         aaCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCCGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcg                                     >  2:1250836/1‑100 (MQ=17)
                                                          aCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCGGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                    <  2:1219038/100‑1 (MQ=18)
                                                          aCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCGGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                    >  1:1219046/1‑100 (MQ=18)
                                                          aCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                    >  2:616585/1‑100 (MQ=33)
                                                           cGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCt                                   >  1:788877/1‑100 (MQ=33)
                                                            ggCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtt                                  <  2:2274796/100‑1 (MQ=33)
                                                            ggCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtt                                  <  2:89350/100‑1 (MQ=33)
                                                             gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGAttt                                 <  2:333275/100‑1 (MQ=17)
                                                              cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTc                                <  2:3352091/100‑1 (MQ=33)
                                                                tGTCGATCGCACGCTCTGGTGCCGGAATATAAGGTGCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtggca                               <  2:3602082/99‑5 (MQ=11)
                                                                tGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCag                              >  2:443353/1‑100 (MQ=33)
                                                                 gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                             <  1:2138743/100‑1 (MQ=33)
                                                                  tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                            <  1:2271820/100‑1 (MQ=33)
                                                                     aacGCACGCTCTGGTTCCGGAATATAGGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAg                         >  1:2455327/3‑100 (MQ=16)
                                                                     aTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAg                         >  2:1809206/1‑100 (MQ=33)
                                                                       cGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGGTTGTCGGTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGaa                       >  1:1984149/1‑100 (MQ=255)
                                                                       cGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGaa                       >  2:376144/1‑100 (MQ=33)
                                                                        gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                      >  2:1974304/1‑100 (MQ=33)
                                                                        gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                      <  1:1583264/100‑1 (MQ=32)
                                                                        gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                      >  1:380036/1‑100 (MQ=33)
                                                                           cGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCac                   >  1:2290466/1‑100 (MQ=33)
                                                                            gCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGTGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacg                  <  2:2409998/100‑1 (MQ=18)
                                                                               ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTCCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac               >  2:625727/1‑100 (MQ=17)
                                                                                 ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga             >  1:353450/1‑100 (MQ=33)
                                                                                 ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga             >  2:278534/1‑100 (MQ=33)
                                                                                 ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga             >  2:2857111/1‑100 (MQ=33)
                                                                                  gTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGAt            >  1:3598083/1‑100 (MQ=33)
                                                                                   ttCCGGACTATGAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCATTCCAGCGCTTTCAGAGCAGAACCACGAACGATc           >  2:1913352/1‑100 (MQ=255)
                                                                                   ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc           >  2:2445509/1‑100 (MQ=33)
                                                                                   ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc           >  1:3169752/1‑100 (MQ=33)
                                                                                     ccGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCgg         <  1:1966848/100‑1 (MQ=33)
                                                                                       ggAATATGAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg       >  1:2844383/1‑100 (MQ=18)
                                                                                        gAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg       <  2:1719814/99‑1 (MQ=32)
                                                                                         aaTATAAGACTCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtg     <  2:2202006/100‑1 (MQ=17)
                                                                                          atatAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtgt    >  1:942904/1‑100 (MQ=32)
                                                                                            ataAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTACCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTgtcg  <  2:1984138/100‑1 (MQ=11)
                                                                                                 |                                                                                              
CCGGTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTGTCG  >  NC_000913/3470641‑3470832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.