New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3470738 =NA (NA)6 (0.050) 4/168 NT NA coding (592/1185 nt) tufA translation elongation factor EF‑Tu 1
?NC_000913 3470767 = NA (NA)coding (563/1185 nt) tufA translation elongation factor EF‑Tu 1

Only 100 of 101 total aligned reads displayed.

ATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTGTCGTCGCCCGGGAAGTCGT  >  NC_000913/3470668‑3470848
                                                                                                   |                                                                                 
aTGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAttt                                                                                   <  2:2589880/100‑1 (MQ=33)
 tGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAtttt                                                                                  >  1:363261/1‑100 (MQ=32)
  ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                                 <  1:1781705/100‑1 (MQ=33)
  ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                                 <  1:2030858/100‑1 (MQ=33)
  ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAATTCCAGGATTTTc                                                                                 <  2:2257254/100‑1 (MQ=18)
   gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                                                >  2:1895990/1‑100 (MQ=33)
   gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                                                <  2:147065/100‑1 (MQ=33)
   gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCAAGCCAGTTCCAGGATTTTCg                                                                                <  1:730473/100‑1 (MQ=17)
     gaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCt                                                                              >  2:1284769/1‑100 (MQ=33)
     gaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCt                                                                              <  1:83522/100‑1 (MQ=33)
     gaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCt                                                                              >  2:757162/1‑100 (MQ=32)
       aTACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTc                                                                            <  1:3467096/100‑1 (MQ=32)
        tACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTcc                                                                           <  2:2777281/100‑1 (MQ=33)
         aCGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTccc                                                                          <  1:1160785/100‑1 (MQ=33)
          cGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCa                                                                         >  2:1405992/1‑100 (MQ=32)
            tCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCAct                                                                       >  2:1473116/1‑100 (MQ=32)
            tCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCAct                                                                       >  1:1886525/1‑100 (MQ=33)
              ttCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActct                                                                     <  1:2331209/100‑1 (MQ=33)
              ttCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActc                                                                      >  2:2181818/1‑99 (MQ=33)
               tCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTg                                                                    >  2:2431150/1‑100 (MQ=33)
               tCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTg                                                                    >  2:3124200/1‑100 (MQ=32)
               tCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTg                                                                    <  2:3077882/100‑1 (MQ=33)
                 ggtCGGCAGCAGGCACGGCTTGTCAATCGCAGGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                                  >  1:2455320/3‑100 (MQ=255)
                 gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                                  <  1:218987/100‑1 (MQ=33)
                 gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                                  <  1:62191/100‑1 (MQ=33)
                 gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                                  >  1:455082/1‑100 (MQ=32)
                 gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                                  >  1:1873491/1‑100 (MQ=33)
                 gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                                  >  1:3318174/1‑100 (MQ=33)
                   tCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTc                                                                <  2:1050492/100‑1 (MQ=33)
                    cGGCAGCAGGAACGGGTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                                               <  1:3594683/100‑1 (MQ=18)
                    cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                                               <  1:91744/100‑1 (MQ=33)
                    cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                                               <  1:2394653/100‑1 (MQ=33)
                    cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                                               <  2:3325429/100‑1 (MQ=33)
                    cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                                               >  1:2795829/1‑100 (MQ=33)
                     ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                                              >  2:861077/1‑100 (MQ=32)
                     ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                                              >  1:1811323/1‑100 (MQ=33)
                     ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                                              >  2:3146937/1‑100 (MQ=33)
                     ctcagcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                                              <  2:1004654/98‑1 (MQ=18)
                      gcagcaGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcc                                                             <  2:2875552/100‑1 (MQ=32)
                      gcagcaGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcc                                                             >  2:56325/1‑100 (MQ=32)
                       cagcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcag                                                            >  1:1004661/1‑98 (MQ=18)
                        agcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCtt                                                           <  2:1501946/100‑1 (MQ=33)
                         gcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTc                                                          >  2:3575560/1‑100 (MQ=33)
                         gcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAATTTCGCTTCCCACTCTGCGTCGcc                                                             >  1:2343451/1‑97 (MQ=17)
                          cagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTcc                                                         >  2:799578/1‑100 (MQ=32)
                          cagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGCCGCCTTcc                                                         <  1:3613995/100‑1 (MQ=18)
                          cagGAACGGCTTGTCAATCGCACGCTCTGGTTCCCGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTcc                                                         <  2:744219/100‑1 (MQ=18)
                          cagGAACGGCTTGTCAAACGCACGCTCTGGTTCCGGAATATAAGAATCCAGAACACCCGCCAGTTCCAGCCGTTTCGCTTCCCCCGATGCGTCGCCTTcc                                                         >  2:2970100/1‑100 (MQ=11)
                            ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                                       >  1:2076925/1‑100 (MQ=33)
                              aaCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCCGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcg                                                     >  2:1250836/1‑100 (MQ=17)
                               aCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCGGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                                    <  2:1219038/100‑1 (MQ=18)
                               aCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCGGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                                    >  1:1219046/1‑100 (MQ=18)
                               aCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                                    <  1:3218701/100‑1 (MQ=32)
                               aCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                                    >  2:616585/1‑100 (MQ=33)
                                cGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCt                                                   >  1:788877/1‑100 (MQ=33)
                                 ggCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtt                                                  <  2:2274796/100‑1 (MQ=33)
                                 ggCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtt                                                  <  2:89350/100‑1 (MQ=33)
                                 ggCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtt                                                  <  1:3024779/100‑1 (MQ=33)
                                  gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGAttt                                                 <  2:333275/100‑1 (MQ=17)
                                   cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTc                                                <  2:3352091/100‑1 (MQ=33)
                                     tGTCGATCGCACGCTCTGGTGCCGGAATATAAGGTGCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtggca                                               <  2:3602082/99‑5 (MQ=11)
                                     tGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCag                                              >  2:443353/1‑100 (MQ=33)
                                      gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                                             <  2:1834230/100‑1 (MQ=33)
                                      gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                                             <  1:2138743/100‑1 (MQ=33)
                                       tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                                            <  1:2271820/100‑1 (MQ=33)
                                       tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                                            <  2:1498214/100‑1 (MQ=32)
                                        cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                                           <  1:1284777/100‑1 (MQ=33)
                                        cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                                           <  1:1707356/100‑1 (MQ=33)
                                        cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                                           <  2:2500773/100‑1 (MQ=33)
                                          aacGCACGCTCTGGTTCCGGAATATAGGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAg                                         >  1:2455327/3‑100 (MQ=16)
                                          aTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAg                                         >  2:1809206/1‑100 (MQ=33)
                                            cGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGGTTGTCGGTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGaa                                       >  1:1984149/1‑100 (MQ=255)
                                            cGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGaa                                       >  2:376144/1‑100 (MQ=33)
                                             gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCCGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                                      >  2:2235315/1‑100 (MQ=17)
                                             gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                                      >  1:380036/1‑100 (MQ=33)
                                             gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                                      >  2:2689714/1‑100 (MQ=33)
                                             gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                                      >  2:1974304/1‑100 (MQ=33)
                                             gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                                      <  1:1583264/100‑1 (MQ=32)
                                                cGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCac                                   >  1:2290466/1‑100 (MQ=33)
                                                 gCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGTGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacg                                  <  2:2409998/100‑1 (MQ=18)
                                                    ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTCCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac                               >  2:625727/1‑100 (MQ=17)
                                                     tGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacg                              <  2:2409441/100‑1 (MQ=33)
                                                      ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga                             >  1:353450/1‑100 (MQ=33)
                                                      ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga                             >  2:2857111/1‑100 (MQ=33)
                                                      ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga                             >  2:278534/1‑100 (MQ=33)
                                                       gTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGAt                            >  1:3598083/1‑100 (MQ=33)
                                                        ttCCGGACTATGAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCATTCCAGCGCTTTCAGAGCAGAACCACGAACGATc                           >  2:1913352/1‑100 (MQ=255)
                                                        ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc                           >  1:3169752/1‑100 (MQ=33)
                                                        ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc                           >  2:2080285/1‑100 (MQ=32)
                                                        ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc                           >  2:2445509/1‑100 (MQ=33)
                                                         tCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCg                          >  1:239473/1‑100 (MQ=33)
                                                          ccGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCgg                         <  1:1966848/100‑1 (MQ=33)
                                                            ggAATATGAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg                       >  1:2844383/1‑100 (MQ=18)
                                                             gAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg                       <  2:1719814/99‑1 (MQ=32)
                                                              aaTATAAGACTCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtg                     <  2:2202006/100‑1 (MQ=17)
                                                               atatAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtgt                    >  1:942904/1‑100 (MQ=32)
                                                                tataAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTgtc                   <  2:3051123/100‑1 (MQ=31)
                                                                 ataAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTgtcg                  <  2:1435168/100‑1 (MQ=11)
                                                                 ataAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTACCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTgtcg                  <  2:1984138/100‑1 (MQ=11)
                                                                                    gcacgTTCCACCATTCTCGCTTCCCATTCTGCGCCGCCTTCCAGCGCTTTCAGTGCTGAACGACGAAGTTTTGGAGTTTCGTCGCCCGGGGTGTCgg  >  2:671459/5‑96 (MQ=0)
                                                                                                   |                                                                                 
ATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTGTCGTCGCCCGGGAAGTCGT  >  NC_000913/3470668‑3470848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.