New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587878NA (NA)19 (0.160) 11/162 NT NA noncoding (7/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4587891 NA (NA)noncoding (20/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 134 total aligned reads displayed.

CGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCG  >  NC_000913/4587794‑4587988
                                                                                                 |                                                                                                 
tgAAACCGCAGTAGGGGTGTTGGCAAGTTTGATTAAGGTGACGAAACGGGATATTGACTATTTTGAGAGAAAGATTAGGCCGGATGCGGCTGCGCCTTAt                                                                                                 >  2:531853/2‑100 (MQ=255)
cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                                 <  1:3023534‑M2/100‑3 (MQ=255)
cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                                 >  1:321661‑M2/1‑98 (MQ=255)
cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                                 <  2:184780‑M2/100‑3 (MQ=255)
 gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                <  2:3614855‑M2/100‑4 (MQ=255)
 gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                <  1:2409610‑M2/100‑4 (MQ=255)
      cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                           >  1:1868965‑M2/1‑92 (MQ=255)
      cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                           >  2:1266441‑M2/1‑92 (MQ=255)
       gAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGccc                                                                                          <  1:3030296/100‑1 (MQ=255)
        aaGGAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCa                                                                                         <  1:1253884/100‑1 (MQ=255)
            aGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATaa                                                                                      >  1:3408330/1‑99 (MQ=255)
            aGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAc                                                                                     <  1:1558102/100‑1 (MQ=255)
               ggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccc                                                                                  <  1:2046957/100‑1 (MQ=255)
               ggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccc                                                                                  >  2:2594788/1‑100 (MQ=255)
                gTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCt                                                                                 <  1:2217824/100‑1 (MQ=255)
                gTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCt                                                                                 <  2:2987078/100‑1 (MQ=255)
                 tttCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                                <  1:3297876/100‑1 (MQ=255)
                   tcttcACGTTTGTTCAAGGTGCCGAACCTGGATATGGACTATTTTGTGTGCAATATCACGCCGGCACTCGATGCCGCTAATCAGGCCCACAACGCCTTAc                                                                              >  2:1671451/1‑100 (MQ=255)
                     ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACtt                                                                            >  1:221587/1‑100 (MQ=255)
                     ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACtt                                                                            >  2:2020949/1‑100 (MQ=255)
                     ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACtt                                                                            >  1:1083390/1‑100 (MQ=255)
                       cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                          <  1:3218754/100‑1 (MQ=255)
                        aCGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCt                                                                         <  1:2105235/100‑1 (MQ=255)
                         cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                        >  2:861664/1‑100 (MQ=255)
                         cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                        >  2:2786983/1‑100 (MQ=255)
                         cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCAGGATGGGGCTGCGCAATATCCGGCACATAACCCCTTACTTcc                                                                          >  2:2139871/1‑98 (MQ=255)
                          gTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGGTGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCa                                                                       >  2:2550379/1‑100 (MQ=255)
                          gTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCa                                                                       <  2:2041620/100‑1 (MQ=255)
                              gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                   >  2:100533/1‑100 (MQ=255)
                              gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                   >  1:2427704/1‑100 (MQ=255)
                              gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                   >  1:606143/1‑100 (MQ=255)
                              gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                   >  2:2836063/1‑100 (MQ=255)
                               ttgAAGGTGCCGAGACTGGATATGGACTATTTAGGGTGAAATATCACGAGGGAGGCGGCTGCGCCTCATCCGGCACGTAACCCCTGCCTGCCTCGAcgcc                                                                  >  2:404155/1‑100 (MQ=255)
                               ttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAcccc                                                                  >  2:3146768/1‑100 (MQ=255)
                                  aaGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCTCTTACTTCCTCAACCCCGCa                                                               >  2:2741258/1‑100 (MQ=255)
                                  aaGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCa                                                               <  1:861670/100‑1 (MQ=255)
                                  aaGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCa                                                               <  1:519952/100‑1 (MQ=255)
                                    ggTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaaa                                                             >  2:3258566/1‑100 (MQ=255)
                                      tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                                           >  1:281290/1‑100 (MQ=255)
                                      tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                                           <  2:184208/100‑1 (MQ=255)
                                      tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGAGCCTTATCAGGCCAATAACCCCTTACTTCCTCAACCCCGAAAACg                                                           >  2:564150/1‑100 (MQ=255)
                                       gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                          >  2:3473515/1‑100 (MQ=255)
                                       gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCACGCCGGATGCGGCTGCGCCTGATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                          <  2:1988116/100‑1 (MQ=255)
                                        ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                                         <  1:100533/100‑1 (MQ=255)
                                        acGAAACTGGATATGGACTATTTTGAGCGAAATATCAGGCCGGATCCGGCTGCGCCTTATCCGGCCCATAACCCCGTACTTCCTCAACCCCGCAAACGc                                                          >  2:2987914/2‑99 (MQ=255)
                                             aCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCg                                                    <  2:3295555/100‑1 (MQ=255)
                                               tGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTCCGCCTTATCCGGCCCATAACCCCCTACTTCCTCACCCCCGCAAACCCAGcc                                                      >  2:821923/1‑96 (MQ=255)
                                               tGGATATGGACTAGTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGccc                                                     <  1:2890680/97‑1 (MQ=255)
                                                 gagatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTAAACCCCGCAATCGTAGCCCGAAtc                                                <  2:1053168/97‑1 (MQ=255)
                                                   tatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtctc                                              >  2:1809561/1‑100 (MQ=255)
                                                       gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                                           <  1:2646081/99‑1 (MQ=255)
                                                       gACTATTTTGAGTGAAATATCAGGCCGGATGAGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcc                                          >  1:2452816/1‑100 (MQ=255)
                                                        aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCGCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcct                                         >  2:749664/1‑100 (MQ=255)
                                                            ttttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtg                                     <  1:1250973‑M2/100‑63 (MQ=255)
                                                            ttttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCgg                                     <  2:357143/100‑1 (MQ=255)
                                                             tgtGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCAGACTCCCTTACTTCCTCAGCCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGc                                    <  2:2407943/98‑1 (MQ=255)
                                                              ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCa                                   <  2:2506899/100‑1 (MQ=255)
                                                              ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCa                                   <  2:454199/100‑1 (MQ=255)
                                                                 aGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaa                                <  1:827489‑M2/100‑68 (MQ=255)
                                                                   tGAAATATCAGGCCGGCGACGAGAGAGCCTTATGAGGAGCACAACCCCTTAGTTACGCACCCCCGCAAACGCGGCCCCAATCTCTACCTCCAGc                                    >  2:2991571/1‑94 (MQ=255)
                                                                   tGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTgg                              >  2:623617/1‑100 (MQ=255)
                                                                    gAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacc                             <  1:2711714‑M2/100‑71 (MQ=255)
                                                                      aaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATc                           >  2:857693/1‑100 (MQ=255)
                                                                      aaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATc                           <  2:1978840/100‑1 (MQ=255)
                                                                      aaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATc                           >  2:2683075/1‑100 (MQ=255)
                                                                       atatCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccct                          <  2:1927687‑M2/100‑74 (MQ=255)
                                                                        tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc                         <  2:1135937/100‑1 (MQ=255)
                                                                        tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc                         >  2:250851/1‑100 (MQ=255)
                                                                        tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc                         <  1:184780/100‑1 (MQ=255)
                                                                        atctaggccGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaaccccta                         >  2:2929964‑M2/5‑26 (MQ=255)
                                                                        atctaggccGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaaccccta                         >  2:2931899‑M2/5‑26 (MQ=255)
                                                                         atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc                         >  2:1475893/1‑99 (MQ=255)
                                                                         atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCg                        <  2:281288/100‑1 (MQ=255)
                                                                          tCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctact                       <  2:371077‑M2/100‑77 (MQ=255)
                                                                          tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                       <  2:1091901/100‑1 (MQ=255)
                                                                           cAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                      >  2:3145166/1‑100 (MQ=255)
                                                                           cAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                      >  1:1360964/1‑100 (MQ=255)
                                                                            aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc                     <  1:2533749‑M2/100‑79 (MQ=255)
                                                                            aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc                     <  1:499424‑M2/100‑79 (MQ=255)
                                                                            aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctaagat                     <  1:2931922‑M2/100‑79 (MQ=255)
                                                                            aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                     <  1:868588/100‑1 (MQ=255)
                                                                            aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                     <  1:1652583/100‑1 (MQ=255)
                                                                            aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                     >  1:1150607/1‑100 (MQ=255)
                                                                            aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCAGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                     <  2:537105/100‑1 (MQ=255)
                                                                            aGGCCGGATGCGGATGCGCCTTatccggcctgatatttgactcaaaatagtccatatccagtttcggcacattcaacaaacgtgaagaaacccctacttc                     <  2:2243984‑M2/100‑79 (MQ=255)
                                                                             ggCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg                    <  2:1504144‑M2/100‑80 (MQ=255)
                                                                             ggCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg                    <  1:1774644‑M2/100‑80 (MQ=255)
                                                                             ggCCGGATGCGGCTGCGCCTTatccgacctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg                    <  1:2219593‑M2/100‑80 (MQ=255)
                                                                              gCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgt                   <  2:2606166‑M2/100‑81 (MQ=255)
                                                                              gCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATaaa                   >  1:2533477/1‑100 (MQ=255)
                                                                               ccGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAac                  >  1:337005/1‑100 (MQ=255)
                                                                                cGGATGCGGCCGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGACCGAGTCTCTTCCTCCGGCAGCTGGATCCCGATAAaca                 <  2:2388328/100‑1 (MQ=255)
                                                                                 ngATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAacac                >  1:923380/2‑100 (MQ=255)
                                                                                       ggCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGt          >  1:3174732/1‑100 (MQ=255)
                                                                                        gCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTg         >  2:1365434/1‑100 (MQ=255)
                                                                                          tGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCt       >  2:3300848/1‑100 (MQ=255)
                                                                                            ggcCTGATGCGGCCCATAACCCGTTACTTCCTCAATCGCGCAAACGCAGCCCGAATCTCTTCCGCCGGCAGCTGGATCCCGATAAACACCATCGTGc        <  2:3222676/96‑1 (MQ=255)
                                                                                              ccTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGc   <  1:2054097/100‑1 (MQ=255)
                                                                                               cTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATg    <  2:1349278/98‑1 (MQ=255)
                                                                                               cTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCg  >  1:1663827/1‑100 (MQ=255)
                                                                                                 |                                                                                                 
CGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCG  >  NC_000913/4587794‑4587988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.