New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2151673 =NA (NA)12 (0.090) 10/156 NT NA intergenic (+27/+38) yegJ/yegK uncharacterized protein/ser/thr phosphatase‑related protein
?NC_000913 2151703 = NA (NA)intergenic (+57/+8) yegJ/yegK uncharacterized protein/ser/thr phosphatase‑related protein

TTGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCAACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2151782‑2151673
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaaccgccaTGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCA  >  NC_000913/2151703‑2151801
                                                                                                                                                                                                                 
TTGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAAT                                                                                                               <  1:1830634/100‑1
TTGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGCGAGTTTCTCATGGCGGTTGAAGACAACAAT                                                                                                               <  2:3355300/100‑1
 TGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATT                                                                                                              <  2:3160019/100‑1
 TGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATT                                                                                                              >  2:1453276/1‑100
 TGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTCTCTCATGGCGGTTGAAGACAACAATT                                                                                                              <  1:412749/100‑1
  GTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTC                                                                                                             >  1:2028754/1‑100
  GTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTC                                                                                                             >  2:2412028/1‑100
  GTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTC                                                                                                             <  1:4104594/100‑1
   TCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCA                                                                                                            >  1:1420845/1‑100
    CCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCAA                                                                                                           >  1:859053/1‑100
    CCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCA                                                                                                            <  1:4394799/99‑1
    CCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCGGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCAA                                                                                                           >  1:3261050/1‑100
      AGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCAACC                                                                                                         <  2:357124/100‑1
         CCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCAACCGCC                                                                                                      <  1:4308078/100‑1
         CCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCAACCGCC                                                                                                      >  2:294589/1‑100
                                                               GCAGGGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCAACCGCCATGAGAAACTCAATCTGACCACAGCGCCAGTGCCAACGGTTTATCATCGTCCG                                                 >  1:603866/1‑99
                                                                        GTTTCTCATGGCGGTTGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTT                                       >  1:2743006/1‑100
                                                                              CATGGCGGTTGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGC                                 >  1:1054481/1‑100
                                                                               ATGGCGGTTGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCC                                >  2:2055758/1‑100
                                                                               ATGGCGGTTGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCC                                >  1:84084/1‑100
                                                                                 GGCGGTTGAAGACAACAATTCAACCGCCATGCGAAAGTCACTCTGCTCACAGCGCCAGCGCCAACGTTTTATCATCCTCCGTACGCTCGTTTACCGCC                                >  1:42076/1‑98
                                                                                 GGCGGTTGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGG                              >  2:173657/1‑100
                                                                                  GCGGTTGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCG                               >  1:164699/1‑98
                                                                                   CGGTTGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCGAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGC                            >  2:2169734/1‑100
                                                                                    GGTTGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCT                           >  2:2264715/1‑100
                                                                                       TGAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGA                        >  1:2581832/1‑100
                                                                                        GAAGACAACAATTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGAC                       >  1:3686319/1‑100
                                                                                                   TTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTT            >  2:270213/1‑100
                                                                                                   TTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTT            >  1:689363/1‑100
                                                                                                    TCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTT           >  2:3270128/1‑100
                                                                                                     CAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTA          >  2:1712546/1‑100
                                                                                                     CAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTA          <  1:781866/100‑1
                                                                                                        CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACA       <  2:4246895/100‑1
                                                                                                        CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACA       >  2:3548079/1‑100
                                                                                                         CGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAA      >  2:1768357/1‑100
                                                                                                          GCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAAT     <  1:2046402/100‑1
                                                                                                          GCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAAT     >  2:2712403/1‑100
                                                                                                          GCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAAT     <  2:1054485/100‑1
                                                                                                            CATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATT    >  2:4361736/1‑99
                                                                                                             ATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCA  <  2:1503317/100‑1
                                                                                                             ATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTC   <  1:566635/99‑1
                                                                                                                                                                                                                 
TTGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGAGTTTCTCATGGCGGTTGAAGACAACAATTCAACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2151782‑2151673
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaaccgccaTGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCA  >  NC_000913/2151703‑2151801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.