| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 937227 = | NA (NA) | 14 (0.100) | 9/162 | NT | NA | noncoding (4/36 nt) | REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 937261 = | NA (NA) | intergenic (+48/‑111) | ftsK/lolA | DNA translocase at septal ring sorting daughter chromsomes/lipoprotein chaperone | |||||
CCTCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/937332‑937227‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGTAATT > NC_000913/937261‑937359 CCTCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTAT > 2:203684/1‑100CCTCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTAT > 2:1748929/1‑100 CTCTACTCTCTATTCCAGGCTAATAATCAGCTTGCGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATC > 1:4045185/1‑100 CTCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATC > 2:1730978/1‑100 CTCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATC > 2:165915/1‑100 TCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCC < 2:3999595/100‑1 TCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCC < 2:1734803/100‑1 TCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCC < 1:2254262/100‑1 TACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGG > 2:2317572/1‑100 TACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGG < 2:2135013/100‑1 TACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGG < 2:1352449/100‑1 TACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGG < 1:703554/100‑1 TACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAAAGTGCCGGATGCGACGCTACCGCGCCTTATCCGG < 1:290579/100‑1 ACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGC < 1:1127921/100‑1 ACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGAGAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGC < 1:2342993/100‑1 CTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCA < 1:1753995/100‑1 CTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCA > 1:2019129/1‑100 TCTCTATTCAATGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCA < 1:1955660/99‑1 ATTACACGCTAATAACCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGCGCCGGATGCGACCCTACCGCGCCTTATCCGGCA < 1:3070938/94‑1 AAGAAAATACTGAATTTTCAGTTGATAGAGTACCAGATGCGAAGCTACCGCGCCTTATCCTACACTCTATCAACTGAAAATTCAGTATTTTCTTCTTT > 1:2476855/1‑98 TGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCCTCTTTCCTCAAGCTGATTATTAGCCTGGA > 1:1669232/1‑100 GATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAA > 2:4069030/1‑100 gtGTGCCGGATGCCACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGA > 2:2988756/3‑100 GAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGA > 2:2969673/1‑100 AGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGACAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAG > 1:1810530/1‑100 AGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGCATAGAG > 2:2143519/1‑100 AGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAG > 1:1754573/1‑100 GTGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGA > 1:542585/1‑100 GTGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGA > 2:3830751/1‑100 TGCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCACCTGAAACTTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGATTAGcg > 1:426174/1‑96 GCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGT > 2:1226919/1‑100 GCCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGT > 2:3426346/1‑100 CCGGATGCGACGCTACCGCGCCTTATCCGGCACTCTATCAACTGAAAATTCAGCATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGACTAGAGAGca > 1:1848917/1‑98 TTATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGT < 1:4069001/100‑1 ATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTtc < 1:888688/100‑3 ATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGA < 2:1374828/100‑1 TCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTtc < 1:1523626/99‑3 TCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGAC < 2:1243166/100‑1 CCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCCAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACGCCCGATCGGGAGTtccc < 1:1633952/100‑5 CCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACG < 1:3872968/100‑1 CCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACG < 1:3968414/100‑1 CGGGACTCTATCAACTGAAAATTCAGTATTTTCTTCTTGCCGCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACGCCCGATCGGGAGTtccc < 1:2939432/99‑5 CGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGT < 2:2703438/100‑1 CGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGT < 2:93040/100‑1 GCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTtccctct < 2:2161192/100‑8 GCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGTAA < 1:1016638/100‑1 ACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGTAATT < 2:1760285/100‑1 CCTCTACTCTCTATTCCAGGCTAATAATCAGCTTGAGGAAAGAAGAAAATACTGAATTTTCAGTTGATAGAGTGCCGGATGCGACGCTACCGCGCCTTATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/937332‑937227‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGTAATT > NC_000913/937261‑937359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |