New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 937227 =NA (NA)14 (0.100) 9/162 NT NA noncoding (4/36 nt) REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 937261 = NA (NA)intergenic (+48/‑111) ftsK/lolA DNA translocase at septal ring sorting daughter chromsomes/lipoprotein chaperone

Only 100 of 186 total aligned reads displayed.

TCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAG  >  NC_000913/937128‑937326
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aattacgtcactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagt                                                                                                     <  2:1760285‑M1/1‑1 (MQ=255)
 cGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATg                                                                                                    >  1:765753/1‑100 (MQ=255)
  ttacgtcactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGc                                                                                                   <  1:1016638‑M1/3‑1 (MQ=255)
  gAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGCCTACCTAATGCATCGTATGc                                                                                                   >  1:3077446/1‑100 (MQ=255)
  gAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGc                                                                                                   >  1:3583998/1‑100 (MQ=255)
  gAACAGATGGAAGCGCAGGGGAATGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTAACCCCACCGCCGTTTGACTAACTAATGCATCGTATGc                                                                                                   >  1:2548026/1‑100 (MQ=255)
   aaCAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGcc                                                                                                  >  2:2853446/1‑100 (MQ=255)
    acgtcactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCg                                                                                                 <  2:93040‑M1/5‑1 (MQ=255)
    acgtcactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCg                                                                                                 <  2:2703438‑M1/5‑1 (MQ=255)
     gggaactcccgatcgggcgttccctctactctctattccaggctaataatcagcttgcggcaagaagaaaatactgaattttcagttgatagagTCCCg                                                                                                 <  1:2939432‑M1/5‑1 (MQ=255)
     gggaactcccgatcgggcgttccctctactctctattccaggctaataatcagctggaggaaagaagaaaatactgaattttcagttgatagagTGCCgg                                                                                                <  1:1633952‑M1/6‑1 (MQ=255)
     cgtcactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCgg                                                                                                <  1:3968414‑M1/6‑1 (MQ=255)
     cgtcactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCgg                                                                                                <  1:3872968‑M1/6‑1 (MQ=255)
     cAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCgg                                                                                                >  1:140382/1‑100 (MQ=255)
      gtcactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGa                                                                                               <  2:1243166‑M1/7‑1 (MQ=255)
       gaactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGa                                                                                               <  1:1523626‑M1/7‑1 (MQ=255)
         tGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATaa                                                                                            >  2:2546329/1‑100 (MQ=255)
         tGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATaa                                                                                            >  2:3717506/1‑100 (MQ=255)
         tGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATaa                                                                                            >  2:4086328/1‑100 (MQ=255)
           gAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          >  1:3254034/1‑100 (MQ=255)
             aGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGgcg                                                                                        >  1:114641/1‑100 (MQ=255)
              gcgcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGgcgc                                                                                       <  1:2713226/100‑1 (MQ=255)
               cgcAGGGGATTGTCAGCGAACAGGGGTACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGcgcg                                                                                      <  2:2168001/100‑1 (MQ=255)
               cgaaGGAGATTGTCATCGAACAGGGGCACAACGGTAAATGTGAAGTGCTTGCCGCACCTCCGTTTGAAAAAATAATTCATAGTTTCGCGAACAAGGcgcg                                                                                      <  1:1309785/97‑1 (MQ=255)
                 cAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGt                                                                                    >  1:2127053/1‑100 (MQ=255)
                 cAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGt                                                                                    >  1:1475168/1‑100 (MQ=255)
                  aGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTa                                                                                   <  2:1426104/100‑1 (MQ=255)
                   ggggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGGTTGACTAACTAATGCATCGTATGCCGGATAAGGcgcg                                                                                      <  1:2789249/96‑1 (MQ=255)
                     ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCg                                                                                >  2:1569577/1‑100 (MQ=255)
                     ggATTGTCAGCGAACAGGGGCACAACGGTAAGCGTGAAGTGCTGGCTCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCg                                                                                <  1:2109514/100‑1 (MQ=255)
                      gATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGt                                                                               <  2:2667556/100‑1 (MQ=255)
                        ttGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCg                                                                             <  2:2285528/100‑1 (MQ=255)
                          gTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCa                                                                           >  2:2642682/1‑100 (MQ=255)
                           tCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCAt                                                                          >  1:1021075/1‑100 (MQ=255)
                            cAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATc                                                                         >  2:1074541/1‑100 (MQ=255)
                             aGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTGTGCCGGATAAGGCGCGGTAGCGTCGCATcc                                                                        <  1:4079648/100‑1 (MQ=255)
                             aGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATcc                                                                        <  1:1598462/100‑1 (MQ=255)
                             aGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATcc                                                                        >  2:1846939/1‑100 (MQ=255)
                                gAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGc                                                                     <  2:392615/100‑1 (MQ=255)
                                gAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGc                                                                     <  1:4059777/100‑1 (MQ=255)
                                gAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGc                                                                     <  1:866112/100‑1 (MQ=255)
                                gAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGc                                                                     >  2:690946/1‑100 (MQ=255)
                                actctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGc                                                                     >  2:3426346‑M1/68‑100 (MQ=255)
                                  tctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAc                                                                   >  2:3830751‑M1/66‑100 (MQ=255)
                                   ctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAct                                                                  >  1:1754573‑M1/65‑100 (MQ=255)
                                   ctctatgccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAct                                                                  >  2:2143519‑M1/65‑100 (MQ=255)
                                   cAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCGACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCGTCCGGCAct                                                                  >  1:1871242/1‑100 (MQ=255)
                                    tctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCActc                                                                 >  2:2969673‑M1/64‑100 (MQ=255)
                                      gggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTa                                                               <  1:2058788/100‑1 (MQ=255)
                                        ttccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATc                                                             >  2:4069030‑M1/60‑100 (MQ=255)
                                        gCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATc                                                             <  2:3254051/100‑1 (MQ=255)
                                        gCACAACCGTACTCGTGAAGTACAGGAACCACCGCCGTTTGACTCACTAATGCATCGTCTGCAGGATCACTCGCGGCAGCGCCGCATCGAGCGCTCTATc                                                             >  1:3747875/1‑100 (MQ=255)
                                          acaACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCa                                                            >  1:1748923/1‑99 (MQ=255)
                                              cGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGa                                                       >  2:2129887/1‑100 (MQ=255)
                                               ggTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaa                                                      <  2:4274612/100‑1 (MQ=255)
                                                gTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaaa                                                     <  1:4161787/100‑1 (MQ=255)
                                                 tAATCGTGAAGTGCTTGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaaaa                                                    <  2:4332201/100‑1 (MQ=255)
                                                  aaTCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAAt                                                   <  2:238362/100‑1 (MQ=255)
                                                     cGTGGAGTGCTGGCCCCACCGCCGTGTGACTAACTAATGCATCGGATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCa                                                <  1:3596333/100‑1 (MQ=255)
                                                      gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               >  2:1152740/1‑100 (MQ=255)
                                                      gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  2:539906/100‑1 (MQ=255)
                                                      gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               >  1:4252010/1‑100 (MQ=255)
                                                        gAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGt                                              >  1:1789181/1‑99 (MQ=255)
                                                          aGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAtt                                           >  1:613003/1‑100 (MQ=255)
                                                            tGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAtt                                           >  1:402962/1‑98 (MQ=255)
                                                             gCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                        >  1:4312235/1‑100 (MQ=255)
                                                             gCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                        >  1:221749/1‑100 (MQ=255)
                                                              cTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttct                                       >  2:1614630/1‑100 (MQ=255)
                                                                ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     <  2:801222/100‑1 (MQ=255)
                                                                ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     <  1:3486336/100‑1 (MQ=255)
                                                                 aaagaagaaaatactgaattttcagttgatagagTGTAGGATAAGGCGCGGTAGCTTCGCATCTGGTACTCTATCAACTGAAAATTCAGTATTttctt                                      >  1:2476855‑M1/35‑98 (MQ=255)
                                                                  ccccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTcttctt                                   >  2:1160992/1‑100 (MQ=255)
                                                                  ccccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTcttctt                                   >  1:4384519/1‑100 (MQ=255)
                                                                   cccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGCTAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCttt                                  <  1:2386270/100‑1 (MQ=255)
                                                                   cccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCttt                                  >  1:4353586/1‑100 (MQ=255)
                                                                    ccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTc                                 >  2:2085383/1‑100 (MQ=255)
                                                                    ccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTc                                 <  1:829105/100‑1 (MQ=255)
                                                                      aCCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCt                               <  2:1361255/100‑1 (MQ=255)
                                                                       ccgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCCTCCGTCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTc                              >  2:2186035/1‑100 (MQ=255)
                                                                        cgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCa                             <  2:4302077/100‑1 (MQ=255)
                                                                           cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                          >  2:2509446/1‑100 (MQ=255)
                                                                           cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                          >  1:203683/1‑100 (MQ=255)
                                                                           cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                          <  2:3077463/100‑1 (MQ=255)
                                                                           cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                          <  2:3626553/100‑1 (MQ=255)
                                                                             tttGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTg                        <  2:1719961/100‑1 (MQ=255)
                                                                               tGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGat                      <  2:2043607/100‑1 (MQ=255)
                                                                                  ctaactaaTGCATCGTATGCCGGATAAGGCGCGGTAGAGTCGCATCCAGCCCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatta                    >  1:1818411/1‑99 (MQ=255)
                                                                                   taactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGattatt                  <  1:2135878/100‑1 (MQ=255)
                                                                                     actaaTGCATCGTATGCTGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAg                <  1:2638100/100‑1 (MQ=255)
                                                                                       taaTGCATCGTATGCCGGATAAGGCGCAGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGcc              <  1:194817/100‑1 (MQ=255)
                                                                                       taaTGCATCGGATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAATATTCAGTATTTGCTTCTTTCCTCAAGCTGATTATTAGcc              <  1:559588/100‑1 (MQ=255)
                                                                                        aaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGccn             <  1:523927/100‑2 (MQ=255)
                                                                                        aaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCt             >  1:1956427/1‑100 (MQ=255)
                                                                                          tGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTgg           <  2:4121259/100‑1 (MQ=255)
                                                                                          tGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTGTCTTCTTTCCTCAAGCTGATTATTAGCCTg            >  1:584935/1‑99 (MQ=255)
                                                                                            cATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCTGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGaa         <  1:3026820/100‑1 (MQ=255)
                                                                                                 tATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagag    <  2:4221170/100‑1 (MQ=255)
                                                                                                 tATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagag    <  1:939733/100‑1 (MQ=255)
                                                                                                  aTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagaga   >  1:1714851/1‑100 (MQ=255)
                                                                                                   TGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagagag  >  1:2019129‑M1/1‑100 (MQ=255)
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TCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAG  >  NC_000913/937128‑937326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.