| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1044089 | 106 (0.670) | 19 (0.140) | 10/158 | NT | 15.9% | coding (122/2181 nt) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| ? | NC_000913 | = 1044098 | 107 (0.760) | coding (113/2181 nt) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation | |||||
Only 100 of 226 total aligned reads displayed.
CTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCG > NC_000913/1043990‑1044188 | cTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGA > 2:2504058‑M1/1‑100 (MQ=255)cTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGA > 1:1211711‑M1/1‑100 (MQ=255)cTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGA < 1:166513‑M1/100‑1 (MQ=255) gagaATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAAt > 1:970191/1‑100 (MQ=255) gaATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgc > 2:447364‑M1/1‑96 (MQ=255) gaATGGAGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATaa > 1:1703444/1‑100 (MQ=255) aTGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAAcg > 2:877467/1‑100 (MQ=255) tGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAAcgc < 2:229682/100‑1 (MQ=255) cGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGt > 1:3308529‑M2/1‑99 (MQ=255) cGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGt < 2:1227149‑M2/100‑2 (MQ=255) gCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAGGCGACAGCGATCAGCGTGAATAACGCGGtcacg < 1:1531912‑M2/100‑6 (MQ=255) cccTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtcacgc < 2:2882507‑M2/100‑7 (MQ=255) ccTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgct < 1:3974694‑M1/100‑17 (MQ=255) cTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgctg < 1:3979860‑M1/100‑18 (MQ=255) cTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtcacgctg > 2:1788119‑M2/1‑92 (MQ=255) aggcagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTg > 2:3052432‑M1/74‑100 (MQ=255) tGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtcacgctga > 2:2763335‑M2/1‑91 (MQ=255) gcagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGat > 2:257197‑M1/72‑100 (MQ=255) gcagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGat > 2:2094227‑M1/72‑100 (MQ=255) gcagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGat > 2:3308975‑M1/72‑100 (MQ=255) gTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgctgat < 1:1943001‑M1/100‑20 (MQ=255) gTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgctgat < 1:1526996‑M1/100‑20 (MQ=255) gTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgctgat < 2:499192‑M1/100‑20 (MQ=255) cagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGata > 2:2762710‑M1/71‑100 (MQ=255) cagcacgcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGata > 2:3670415‑M1/71‑100 (MQ=255) ttttGCTGAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGata < 1:104323/99‑1 (MQ=255) ttttGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgctgatc < 1:690515‑M1/99‑21 (MQ=255) tttGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgctgatcgc < 2:2087507‑M1/100‑23 (MQ=255) tttGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgctgatcgc < 2:4009372‑M1/100‑23 (MQ=255) tttGCTCAACCTGGACCAGAGTATCTGACTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAccgcgttattcacgctgatcgc < 2:980730‑M1/100‑23 (MQ=255) gCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATaaa > 2:4365973/1‑100 (MQ=255) gCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATaaa > 1:1730531/1‑100 (MQ=255) tcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGATAATAAAc > 1:807849‑M1/65‑100 (MQ=255) cTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAAc < 2:1495712/100‑1 (MQ=255) cAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACtt > 2:3929030/1‑100 (MQ=255) cAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACtt > 1:2576294/1‑100 (MQ=255) cAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACtt > 1:4071452/1‑100 (MQ=255) aggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGATAATAAACtt > 2:3414990‑M1/63‑100 (MQ=255) cTGTACCAGAGTATCTGCCTGATAAATTGGTTTGCTTCACCGCGAGTAAGCGACAACGATCAGCGTGAATAACGCTGTCACGCTGATAATAAACTTACgg < 1:3048328/100‑1 (MQ=255) ccAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATc > 1:3634161/1‑100 (MQ=255) agagTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATccc < 1:4286384/100‑1 (MQ=255) agagTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATcc < 1:182060/99‑1 (MQ=255) agagTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAAGAACGCGGTCACGCTGATAATAAACTTACGGTGATccc < 1:2355374/100‑1 (MQ=255) agTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCAt < 1:295640/100‑1 (MQ=255) tATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATaa < 1:1892645/100‑1 (MQ=255) aTCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAAc < 1:1416310/100‑1 (MQ=255) aTCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAAc > 2:1336617/1‑100 (MQ=255) tCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACt < 2:610194/100‑1 (MQ=255) gCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGc > 1:733758/1‑100 (MQ=255) gCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGc < 1:2385830/100‑1 (MQ=255) cTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCg > 2:3463613/1‑100 (MQ=255) tGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGc > 1:3418741/1‑97 (MQ=255) gATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGAc > 2:2050447/1‑100 (MQ=255) aTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGAcc > 2:4210513/1‑100 (MQ=255) tAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCa < 1:2050439/100‑1 (MQ=255) tAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCa < 2:968799/100‑1 (MQ=255) aaTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGa > 2:3615067/1‑100 (MQ=255) aaTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGa > 1:1652508/1‑100 (MQ=255) aaTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGa > 1:2696927/1‑100 (MQ=255) agtgttgtgCTTAACAGCGAGTAAGCGATAGCGATAAGAGTGATTAACGCGGACACACAAATAATAAACGAACGGTGATCCAATATGCCGCCGACCAGAc < 1:1135439/95‑1 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGaa > 2:1892023/1‑100 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGaa > 1:4377834/1‑100 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCACATAACTCGCCGACCAGACGaa > 1:3298156/1‑100 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAAAATACGATGATCCCATAACTCGCCGACCAGACGaa > 2:404085/1‑100 (MQ=255) tAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcg > 2:1621191/1‑100 (MQ=255) tAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcg < 1:1361226/100‑1 (MQ=255) tAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGAAgatcg > 2:4107402/1‑100 (MQ=255) aaCAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatc > 1:2412092/1‑98 (MQ=255) cAGCGAGTAAGCGATAGCGATAAGCGTGACTAAAGCGGTCACGCTGATAATAAACTTACGCTTATCCCATTACTCGCCGACCACACGTAGCAgatcgct > 1:2038277/1‑97 (MQ=255) cAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcgatc > 2:1658441/1‑100 (MQ=255) cAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcgatc < 2:1253327/100‑1 (MQ=255) gAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCAt < 2:660923/100‑1 (MQ=255) aaGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTc > 2:1105531/1‑100 (MQ=255) cGACAGCGATCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttga < 1:1072232‑M2/100‑74 (MQ=255) gACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCTTGa > 2:3596560/1‑100 (MQ=255) aCAGCGATCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagc < 2:1124667‑M2/100‑76 (MQ=255) aCAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAg < 1:3494208/100‑1 (MQ=255) aCAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAg < 1:2871116/100‑1 (MQ=255) aGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCCACCAGACGAAGCAGATCGATCTCATTTTCCTGAGtg < 2:3111943/100‑1 (MQ=255) gCGATCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaa < 1:472567‑M2/100‑79 (MQ=255) aTCAGCGTGAccgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaac > 2:645857‑M1/1‑10 (MQ=255) aTCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaac < 1:548421‑M2/100‑82 (MQ=255) tCAGCGTGAccgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcatgcagatactctggtccaggttgagcaaaaa < 1:3033380‑M1/98‑90 (MQ=255) tCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaaca < 2:2540196‑M2/100‑83 (MQ=255) tCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaaca < 2:3620410‑M2/100‑83 (MQ=255) cAGCGTGAccgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacag > 1:1934053‑M1/1‑8 (MQ=255) CAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCt < 1:2248401‑M1/100‑1 (MQ=255) aGCGTGAccgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagg < 2:2859363‑M1/100‑94 (MQ=255) aGCGTGAccgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagg > 2:3381347‑M1/1‑7 (MQ=255) aGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagg > 2:548423‑M2/1‑16 (MQ=255) AGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtg < 2:1232591‑M1/100‑1 (MQ=255) GCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtgg < 2:1598343‑M1/100‑1 (MQ=255) cGTGAccgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagggc < 1:1836723‑M1/100‑96 (MQ=255) CGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggt < 2:1447934‑M1/100‑1 (MQ=255) gTGAccgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagggca > 1:2982090‑M1/1‑4 (MQ=255) GTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggtg < 1:378604‑M1/100‑1 (MQ=255) tGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagggcaa < 1:1149912‑M2/100‑89 (MQ=255) gAccgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagggcaac < 2:2496511‑M1/100‑99 (MQ=255) accgcgttattcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagggcaacg < 2:2486226‑M1/100‑100 (MQ=255) AATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCg > 2:193972‑M1/1‑100 (MQ=255) | CTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCG > NC_000913/1043990‑1044188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |