| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1044089 | 106 (0.670) | 19 (0.140) | 10/158 | NT | 15.9% | coding (122/2181 nt) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| ? | NC_000913 | = 1044098 | 107 (0.760) | coding (113/2181 nt) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation | |||||
Only 100 of 200 total aligned reads displayed.
GCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATA > NC_000913/1043999‑1044196 | gCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGTCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCgg < 1:4270973/100‑1 (MQ=255)gCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGCTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCgg < 2:3863412/100‑1 (MQ=255) cGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGt < 2:1227149‑M2/100‑2 (MQ=255) cGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGt < 2:2486226‑M2/100‑2 (MQ=255) gTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtc < 1:1167037‑M2/100‑3 (MQ=255) ccaccaggcagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCa > 1:496736‑M1/79‑100 (MQ=255) tGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtcac > 1:2982090‑M2/1‑96 (MQ=255) ccTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtcacgct < 2:2859363‑M2/100‑8 (MQ=255) cTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtcacgctg > 1:1934053‑M2/1‑92 (MQ=255) aggcagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTg > 2:3052432‑M1/74‑100 (MQ=255) tGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtcacgctga > 2:2763335‑M2/1‑91 (MQ=255) gcagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGat > 2:2094227‑M1/72‑100 (MQ=255) gTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGtcacgctgat > 2:645857‑M2/1‑90 (MQ=255) cagcactcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGata > 2:3286807‑M1/71‑100 (MQ=255) cagcacgcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGata > 2:3670415‑M1/71‑100 (MQ=255) ttttGCTGAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGata < 1:104323/99‑1 (MQ=255) cactcaggaagatgagatggatctgcttcgtctggtcggcgagttatgggatcgccgtaagtttatcATCAGCGTGAATAACGCGGTCACGCTGataata > 1:2888952‑M1/68‑100 (MQ=255) actcaggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGAtaataa > 2:4179267‑M1/67‑100 (MQ=255) gCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATaaa > 2:4365973/1‑100 (MQ=255) gCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATaaa < 2:3314550/100‑1 (MQ=255) cTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAAc < 2:1495712/100‑1 (MQ=255) cTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAAc > 2:3590350/1‑100 (MQ=255) cAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACtt > 2:3929030/1‑100 (MQ=255) cAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACtt > 1:4071452/1‑100 (MQ=255) cAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACtt > 1:2576294/1‑100 (MQ=255) aggaaaatgagatcgatctgcttcgtctggtcggcgagttatgggatcaccgtaagtttattATCAGCGTGAATAACGCGGTCACGCTGATAATAAACtt > 2:3414990‑M1/63‑100 (MQ=255) aaCCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTa > 1:2334463/1‑100 (MQ=255) cTGTACCAGAGTATCTGCCTGATAAATTGGTTTGCTTCACCGCGAGTAAGCGACAACGATCAGCGTGAATAACGCTGTCACGCTGATAATAAACTTACgg < 1:3048328/100‑1 (MQ=255) cTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACgg < 1:153392/100‑1 (MQ=255) cTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACgg < 1:18189/100‑1 (MQ=255) cTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACgg > 1:1825499/1‑100 (MQ=255) agTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCAt < 1:295640/100‑1 (MQ=255) gTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATa < 2:820512/100‑1 (MQ=255) tATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATaa < 1:1892645/100‑1 (MQ=255) aTCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAAc > 1:3323121/1‑100 (MQ=255) aTCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAAc > 2:1336617/1‑100 (MQ=255) aTCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAAc < 1:1416310/100‑1 (MQ=255) tCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACt < 2:610194/100‑1 (MQ=255) tGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCg > 2:2431370/1‑100 (MQ=255) gCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGc > 1:733758/1‑100 (MQ=255) cTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCg > 2:3463613/1‑100 (MQ=255) tGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGc > 1:3418741/1‑97 (MQ=255) tGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGa > 1:2460819/1‑100 (MQ=255) gATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGAc > 1:2797406/1‑100 (MQ=255) aTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGAcc > 2:4210513/1‑100 (MQ=255) tAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCa < 1:2050439/100‑1 (MQ=255) tAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCa < 2:968799/100‑1 (MQ=255) aaTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGa > 1:2696927/1‑100 (MQ=255) aaTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGa > 1:1653108/1‑100 (MQ=255) agtgttgtgCTTAACAGCGAGTAAGCGATAGCGATAAGAGTGATTAACGCGGACACACAAATAATAAACGAACGGTGATCCAATATGCCGCCGACCAGAc < 1:1135439/95‑1 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGaa > 2:1892023/1‑100 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGaa > 1:4377834/1‑100 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCACATAACTCGCCGACCAGACGaa > 1:3298156/1‑100 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAAAATACGATGATCCCATAACTCGCCGACCAGACGaa > 2:404085/1‑100 (MQ=255) tgtgCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGc < 1:3142323/100‑1 (MQ=255) tAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcg > 2:1621191/1‑100 (MQ=255) tAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcg > 1:1676281/1‑100 (MQ=255) tAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcg < 1:1361226/100‑1 (MQ=255) tAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGAAgatcg > 2:4107402/1‑100 (MQ=255) aCAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcga > 1:3788111/1‑99 (MQ=255) cAGCGAGTAAGCGATAGCGATAAGCGTGACTAAAGCGGTCACGCTGATAATAAACTTACGCTTATCCCATTACTCGCCGACCACACGTAGCAgatcgct > 1:2038277/1‑97 (MQ=255) cAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcgatc > 2:1658441/1‑100 (MQ=255) cAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAgatcgatc < 2:1253327/100‑1 (MQ=255) cGACAGCGATCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttga < 1:1072232‑M2/100‑74 (MQ=255) cGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTg < 2:1098411/100‑1 (MQ=255) cGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTg < 2:3970626/100‑1 (MQ=255) cGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTg < 2:2746511/100‑1 (MQ=255) aCAGCGATCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagc < 2:1124667‑M2/100‑76 (MQ=255) aCAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAg < 2:2048509/100‑1 (MQ=255) aCAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAg < 1:3494208/100‑1 (MQ=255) aGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCCACCAGACGAAGCAGATCGATCTCATTTTCCTGAGtg < 2:3111943/100‑1 (MQ=255) gCGATCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcagtcagatactctggtccaggttgagcaaa < 2:980730‑M2/100‑79 (MQ=255) gATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGtgctg > 2:207958/1‑100 (MQ=255) aTCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaac < 1:1526996‑M2/100‑82 (MQ=255) aTCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaac < 2:499192‑M2/100‑82 (MQ=255) ATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGtgctgc > 2:1652513‑M1/1‑100 (MQ=255) tCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaaca < 2:2540196‑M2/100‑83 (MQ=255) tCAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaaca < 2:3620410‑M2/100‑83 (MQ=255) TCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGcc > 1:239615‑M1/1‑100 (MQ=255) TCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGcc > 1:781967‑M1/1‑100 (MQ=255) cAGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacag < 1:3979860‑M2/100‑84 (MQ=255) CAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCt < 1:2248401‑M1/100‑1 (MQ=255) aGCGTGAATAACGCGGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagg > 2:548423‑M2/1‑16 (MQ=255) AGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtg > 1:646526‑M1/1‑100 (MQ=255) AGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtg < 2:1232591‑M1/100‑1 (MQ=255) GCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtgg < 2:1598343‑M1/100‑1 (MQ=255) CGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggt < 2:1447934‑M1/100‑1 (MQ=255) CGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggt < 1:2365771‑M1/100‑1 (MQ=255) GTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggtg < 1:3555432‑M1/100‑1 (MQ=255) GTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggtg < 1:1729563‑M1/100‑1 (MQ=255) GTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtg < 1:378386‑M1/97‑1 (MQ=255) TGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggtgg < 1:4298982‑M1/100‑1 (MQ=255) TGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggtgg > 2:3608528‑M1/1‑100 (MQ=255) TGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGAAGATCGATCTCATTTTCCTGAGTGCTGCCtggtgg < 2:2562564‑M1/100‑1 (MQ=255) AATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCg > 2:193972‑M1/1‑100 (MQ=255) aaCGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTAt > 1:816971/1‑100 (MQ=255) cgcgGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTc < 2:675557/100‑1 (MQ=255) gcgGtcacgctgatcgctgtcgcttactcgctgttaagcacaccaatttatcaggcagatactctggtccaggttgagcaaaaacagggcaacgccattc > 2:447364‑M2/1‑4 (MQ=255) gcgGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCa < 2:2914201/100‑1 (MQ=255) ggTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCata < 2:2419974/100‑1 (MQ=255) | GCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATA > NC_000913/1043999‑1044196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |