BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2154593 =	112 (0.710)	20 (0.140)	11/162	NT	17.3%	coding (578/1248 nt)	mdtA	multidrug efflux system, subunit A
*	?	NC_000913	2154624 =	89 (0.620)	20 (0.140)	11/162	NT	17.3%	coding (609/1248 nt)	mdtA	multidrug efflux system, subunit A

Only 100 of 173 total aligned reads displayed.

TTCCCGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGT  >  NC_000913/2154495‑2154692

ttCCCGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTc                                                                                                    >  2:4219760/1‑100 (MQ=255)

ttCCCGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTc                                                                                                    >  1:1866225/1‑100 (MQ=255)

aatcgataggatgcgtctgggtgatcagcacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgctggagaccaacgcgaccaTc                                                                                                    >  1:2052190‑M1/99‑100 (MQ=255)

 tCCCGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCg                                                                                                   >  2:491044/1‑100 (MQ=255)

 atcgataggatgcgtctgggtgatcaccacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCg                                                                                                   >  2:390821‑M1/98‑100 (MQ=255)

  tcgataggatgcgtctgggtgatcaccacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGa                                                                                                  <  1:2574563‑M1/4‑1 (MQ=255)

  cccGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGa                                                                                                  >  2:2370251/1‑100 (MQ=255)

   ccGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGa                                                                                                  >  1:162161/1‑99 (MQ=255)

   ccGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGAc                                                                                                 <  2:2163026/100‑1 (MQ=255)

    gataggatgcgtctgggtgatcaccacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACt                                                                                                <  1:3336612‑M1/6‑1 (MQ=255)

    cGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAACCATGCGTTGCCAGCGCGCAGCTGCAACTCGACt                                                                                                <  1:2886089/100‑1 (MQ=255)

     gCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTg                                                                                               <  2:1090395/100‑1 (MQ=255)

      taggatgcgtctgggtgatcaccacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACTgg                                                                                              >  2:386955‑M1/93‑100 (MQ=255)

       cAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGa                                                                                             >  2:471697/1‑100 (MQ=255)

        aGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAg                                                                                            >  2:3339608/1‑100 (MQ=255)

          gAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGCCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGcc                                                                                          >  2:929347/1‑100 (MQ=255)

           aGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCg                                                                                         <  1:2804960/100‑1 (MQ=255)

             cTGGATGCCCAACAGTCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGa                                                                                       >  1:873317/1‑100 (MQ=255)

               ggATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGAtt                                                                                     >  1:3656834/1‑100 (MQ=255)

                gATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTa                                                                                    >  1:445403/1‑100 (MQ=255)

                 aTGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTAc                                                                                   >  2:1836343/1‑100 (MQ=255)

                  tGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCTCAGCTGCAACTCGACTGGAGCCGGATTAcc                                                                                  <  1:377739/100‑1 (MQ=255)

                  tGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTAcc                                                                                  <  2:2384773/100‑1 (MQ=255)

                  tGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTAcc                                                                                  <  2:825401/100‑1 (MQ=255)

                   gCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTAc                                                                                   >  2:3897333/1‑98 (MQ=255)

                    cccAACAGGCGCTGGTCAGTGAACCCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGCCTGGAGCCGGATTACCGc                                                                                <  1:201026/100‑1 (MQ=255)

                     ccAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCa                                                                               >  2:610450/1‑100 (MQ=255)

                       aaCAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCAcc                                                                             <  2:3978474/100‑1 (MQ=255)

                         cAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAg                                                                           <  1:2026178/100‑1 (MQ=255)

                          aGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGt                                                                          >  2:3444692/1‑100 (MQ=255)

                           ccacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACTGGAGCCGGATTACCGCACCAGTc                                                                         >  1:3454588‑M1/72‑100 (MQ=255)

                           ccacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACTGGAGCCGGATTACCGCACCAGTc                                                                         >  2:216180‑M1/72‑100 (MQ=255)

                           ccacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACTGGAGCCGGATTACCGCACCAGTc                                                                         >  2:200558‑M1/72‑100 (MQ=255)

                           ccacgatcccggtggtatcaccactggagatttggttaccaacaccaacctgcttgagaccaacgcgaccaTCGACTGGAGCCGGATTACCGCACCAGTc                                                                         >  2:2627206‑M1/72‑100 (MQ=255)

                           ccacgatcccggtggtatcaccactggagatttggtcaccaacatcaacctgcttgagaccaacgcgaccaTCGACTGGCGCCGGATTACCGCACCAGTc                                                                         >  2:874814‑M1/72‑100 (MQ=255)

                            cacgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACTGGAGCCGGATTACCGCACCAGTc                                                                         >  1:830553‑M1/71‑99 (MQ=255)

                             cgcTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGa                                                                       <  2:2816860/100‑1 (MQ=255)

                             cgcTGGTCAGTGAAACCGAAGGCACAAATAAGGCTCATAAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCTGATTACCGCAc                                                                              >  1:3699190/1‑93 (MQ=255)

                             acgatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACTGGAGCCGGATTACCGCACCAGTCGa                                                                       >  2:3858330‑M1/70‑100 (MQ=255)

                               gatcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACTGGAGCCGGATTACCGCACCAGTCGATg                                                                     >  2:3813888‑M1/68‑100 (MQ=255)

                               cTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATg                                                                     >  1:3350522/1‑100 (MQ=255)

                                atcccggtggtatcaccactggagatttggttaccaacatcaacctgcttgagaccaacgcgaccaTCGACTGGAGCCGGATTACCGCACCAGTCGATgg                                                                    >  2:4403757‑M1/67‑100 (MQ=255)

                                  gTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTc                                                                  <  1:2594239/100‑1 (MQ=255)

                                  gTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTc                                                                  >  1:1426280/1‑100 (MQ=255)

                                   tCAGTGAAACCGAAGGTACGATTAAGTCTGATGAAGCAAGCGTTGCCAGCGCGTAGCTGCAACTCGACTGGAGTTGGCTTACCGCACCAGTCGAttgac                                                                  >  1:493941/1‑95 (MQ=255)

                                   tCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTcg                                                                 <  2:207240/100‑1 (MQ=255)

                                     aGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTcgcg                                                               <  2:1627815/100‑1 (MQ=255)

                                      gTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTcgcg                                                               >  2:2868842/1‑99 (MQ=255)

                                      gTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGt                                                              >  1:4190498/1‑100 (MQ=255)

                                      gTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGt                                                              >  2:1850371/1‑100 (MQ=255)

                                       tGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGtt                                                             <  2:2320960/100‑1 (MQ=255)

                                         aaaCCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTgg                                                           >  1:459996/1‑100 (MQ=255)

                                           aCCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGtc                                                         <  1:1137746/100‑1 (MQ=255)

                                                aGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAg                                                    <  2:3264304/100‑1 (MQ=255)

                                                 ggCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGc                                                   <  2:1438439/100‑1 (MQ=255)

                                                 ggCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGc                                                   >  1:1626620/1‑100 (MQ=255)

                                                  gtaCCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCa                                                  <  1:3967369/98‑1 (MQ=255)

                                                  gCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCa                                                  >  1:4333190/1‑100 (MQ=255)

                                                   cACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTCGGTCTCAAGCAg                                                 >  1:2655149/1‑100 (MQ=255)

                                                    aCCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAgg                                                <  1:1569534/100‑1 (MQ=255)

                                                    aCCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAgg                                                >  2:615771/1‑100 (MQ=255)

                                                          aaGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATg                                          <  2:3501137/100‑1 (MQ=255)

                                                           aGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCCCCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGt                                         >  1:1936461/1‑100 (MQ=255)

                                                           aGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGt                                         <  2:1517683/100‑1 (MQ=255)

                                                            ggCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGtt                                        >  2:168879/1‑100 (MQ=255)

                                                            ggCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGtt                                        >  1:396734/1‑100 (MQ=255)

                                                            ggCTGATGAAGCAAGCGTTGCCACCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGtt                                        <  1:2161876/100‑1 (MQ=255)

                                                             gCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGACGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTg                                       >  1:1244087/1‑100 (MQ=255)

                                                              cTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTgn                                      <  1:2480654/100‑2 (MQ=255)

                                                              cTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTgg                                      <  2:2495940/100‑1 (MQ=255)

                                                                 atgaAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTaa                                   <  2:3342613/100‑1 (MQ=255)

                                                                 atgaAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTa                                    <  1:1425818/99‑1 (MQ=255)

                                                                  tgaAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAAc                                  >  2:4358717/1‑100 (MQ=255)

                                                                  tgaAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACAGCACCAGTCGATGGTCGCGTTGGTCTAAAGCAGGTTGATGTTGGTAAc                                  >  2:3673562/1‑100 (MQ=255)

                                                                   gaAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGTTTGATGTTGGTAAcc                                 <  2:3951702/100‑1 (MQ=255)

                                                                   gaAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAAcc                                 >  2:3592663/1‑100 (MQ=255)

                                                                    aagcaagcGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCa                                >  1:983891/1‑100 (MQ=255)

                                                                      atcaacctgcttgagaccaacgcgaccaTCGACTGGTGCGGTAATCCGGCTCCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCaaa                              <  1:3491144‑M1/72‑1 (MQ=255)

                                                                        aagcGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAAtc                            >  2:1338783/1‑100 (MQ=255)

                                                                           cGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTcc                         <  1:3997841/100‑1 (MQ=255)

                                                                           cGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTcc                         <  2:2477261/100‑1 (MQ=255)

                                                                                ccAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGG                    <  2:983895‑M1/100‑1 (MQ=255)

                                                                                ccAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGG                    <  2:132392‑M1/100‑1 (MQ=255)

                                                                                  aGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTAAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTG                  <  1:1023486‑M1/100‑1 (MQ=255)

                                                                                     gcgcAGCTGCAACTCGACTGGAGCCGGATTACCGCGCCAGTCGATGGTCGCGTTGGTCTCGAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATa               <  1:1733606/100‑1 (MQ=255)

                                                                                      cgcAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATac              >  1:2452304/1‑100 (MQ=255)

                                                                                       gcAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATacc             >  1:2842421/1‑100 (MQ=255)

                                                                                         aGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATaccac           >  2:2320729/1‑100 (MQ=255)

                                                                                          gCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATaccacc          <  2:3000990/100‑1 (MQ=255)

                                                                                            tGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCgg        <  1:4259651/100‑1 (MQ=255)

                                                                                            tGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCgg        <  1:4260212/100‑1 (MQ=255)

                                                                                            tGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCgg        >  2:654976/1‑100 (MQ=255)

                                                                                             gCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCggg       <  1:2081988/100‑1 (MQ=255)

                                                                                             gCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGATGGTCTCAAGCAGGTTGATGTTAGTAAGCAAATCTCCAGTGGTGATAGCACCggg       >  2:2171073/1‑100 (MQ=255)

                                                                                              cAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGa      >  1:2109011/1‑100 (MQ=255)

                                                                                               aaCTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCGGTGGT‑ATcaccactggaga    <  2:2860678‑M1/100‑13 (MQ=255)

                                                                                               aaCTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGAt     <  2:1553348/100‑1 (MQ=255)

                                                                                                 cTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCg   <  2:840889/100‑1 (MQ=255)

                                                                                                 cTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCg   <  1:627369/100‑1 (MQ=255)

                                                                                                 cTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCg   >  1:3898367/1‑100 (MQ=255)

TTCCCGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGT  >  NC_000913/2154495‑2154692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.