BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2470054 =	168 (1.060)	29 (0.200)	13/164	NT	16.0%	coding (924/1332 nt)	gtrS	serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
*	?	NC_000913	2470086 =	149 (1.020)	29 (0.200)	13/164	NT	16.0%	coding (956/1332 nt)	gtrS	serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Only 100 of 223 total aligned reads displayed.

ATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAAT  >  NC_000913/2469955‑2470151

aTTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGGTGAAACGTTTTCGATTTCACTCTTTTTATTGGTTAGCAAACCAAGc                                                                                                   >  1:1460395/1‑100 (MQ=255)

aTTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGc                                                                                                   <  1:343637/100‑1 (MQ=255)

aTTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGc                                                                                                   >  1:1981028/1‑100 (MQ=255)

   tGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCAcc                                                                                                >  2:3692037/1‑100 (MQ=255)

    tatgttagtaatagtcgttagtatgtttgattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCa                                                                                               >  2:1024380‑M1/96‑100 (MQ=255)

     gcgcAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCAt                                                                                              <  2:4254897/100‑1 (MQ=255)

     atgttagtaatagtcgttagtatgtttgattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCAt                                                                                              <  2:2857469‑M1/6‑1 (MQ=255)

      tgttagtaatagtcgttagtatgtttgattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATc                                                                                             >  2:1981021‑M1/94‑100 (MQ=255)

      cgcAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATc                                                                                             >  2:229009/1‑100 (MQ=255)

      cgcAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATc                                                                                             >  2:2816204/1‑100 (MQ=255)

      cgcAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATc                                                                                             >  1:2320619/1‑100 (MQ=255)

       gaaattccAACAGAAGTTGGAACGTAATGTTTCGATTCTTATAAAGATGAAACGTTTTCGAATGAACTCTTTTTATTGGTTAGCAAACCAAGCACCa                                                                                               <  1:3562144/91‑1 (MQ=255)

        cAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCtt                                                                                           >  1:1364814/1‑100 (MQ=255)

             ccAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAAc                                                                                      >  2:2017999/1‑100 (MQ=255)

              cAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACt                                                                                     <  2:1020527/100‑1 (MQ=255)

              cAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACt                                                                                     >  2:3212789/1‑100 (MQ=255)

               aaCAGAAGTTGGGACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACtt                                                                                    >  1:1839198/1‑100 (MQ=255)

                   gAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCAt                                                                                <  2:1203103/100‑1 (MQ=255)

                    gttagtatgtttgattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCAtt                                                                               <  2:1663784‑M1/21‑1 (MQ=255)

                     aGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCAttt                                                                              >  2:231214/1‑100 (MQ=255)

                     aGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCAttt                                                                              <  1:2191464/100‑1 (MQ=255)

                      gTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTtg                                                                             >  2:1426903/1‑100 (MQ=255)

                        tGGAACGGAATGTTTCGAATCTTATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGATTAGCAAACCAAGCACCATCTTCAAACTTCCATTtga                                                                            <  1:3782914/99‑1 (MQ=255)

                        tGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTtgat                                                                           <  2:3129196/100‑1 (MQ=255)

                          gAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTtgatga                                                                         <  2:4208741/100‑1 (MQ=255)

                             tttgattctccatatattacgtgtagttttttatatacatgttaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATgg                                                                      >  1:3857346‑M1/71‑100 (MQ=255)

                             tttgattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATgg                                                                      >  2:2166456‑M1/71‑100 (MQ=255)

                             tttgattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATgg                                                                      >  2:3783553‑M1/71‑100 (MQ=255)

                             cGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGatgatg                                                                       >  2:3281616/1‑99 (MQ=255)

                             cGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATgg                                                                      >  2:593111/1‑100 (MQ=255)

                              ggAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGgt                                                                     >  1:4370459/1‑100 (MQ=255)

                               gAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGgtg                                                                    <  1:22471/100‑1 (MQ=255)

                                gattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATGgtgt                                                                   >  2:717810‑M1/68‑100 (MQ=255)

                                gattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATGgtgt                                                                   >  1:3620511‑M1/68‑100 (MQ=255)

                                gattctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATGgtgt                                                                   >  1:119887‑M1/68‑100 (MQ=255)

                                 attctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATGGtgtg                                                                  >  1:2990783‑M1/67‑100 (MQ=255)

                                  ttctccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATGGTGTGa                                                                 >  2:1362121‑M1/66‑100 (MQ=255)

                                   tctccatatattacgtgtagttttttatatacatggaaattattttctttatcctgagacatcaCACCATCTTCAAACTTCCCTTTGATGATGGtgtg                                                                  >  1:3685488‑M1/65‑98 (MQ=255)

                                   gTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGTTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGAt                                                                >  1:122739/1‑100 (MQ=255)

                                   gTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGAt                                                                >  1:312490/1‑100 (MQ=255)

                                    tttCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGa                                                                 >  1:832096/1‑98 (MQ=255)

                                    tttCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATg                                                               >  2:3674859/1‑100 (MQ=255)

                                     tccatatattacgtgtagttttttatatacatggaaatcattttctttatactgagacttcaCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGt                                                              >  1:2400060‑M1/63‑100 (MQ=255)

                                     tccatatattacgtgtagttttttatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGt                                                              >  1:1937135‑M1/63‑100 (MQ=255)

                                      tCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGtc                                                             >  2:3513867/1‑100 (MQ=255)

                                        gAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGtctc                                                           >  1:287531/1‑100 (MQ=255)

                                        gAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGtctc                                                           >  2:3886584/1‑100 (MQ=255)

                                          aTCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAg                                                         <  1:1571930/100‑1 (MQ=255)

                                           tctcATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGt                                                        <  1:1863348/100‑1 (MQ=255)

                                            ctcATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATTTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGta                                                       <  2:1965270/100‑1 (MQ=255)

                                            aatatgtttagttttatatatacatggatataattttctttatacttagacatcaCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGta                                                       >  1:1392163‑M1/56‑100 (MQ=255)

                                              cATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACTAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGtata                                                     >  1:3076709/1‑100 (MQ=255)

                                              cATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGtata                                                     >  1:4075443/1‑100 (MQ=255)

                                                tAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATaaa                                                   <  1:875171/100‑1 (MQ=255)

                                                 aaaGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAg                                                  <  2:2508995/100‑1 (MQ=255)

                                                    gATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTATCAAACCAAGCACCATCTTCAAACTCCCATTTGATGATGGTGTGATGTCTCAGTATAAAGaaa                                               <  1:2352010/100‑1 (MQ=255)

                                                    gATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGaaa                                               >  2:4348465/1‑100 (MQ=255)

                                                      tGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAat                                             >  2:2267005/1‑100 (MQ=255)

                                                       gAAACGTTTTCGAATGCACTCTTTTTATTGGTGAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGATGTGATGTCTCAGTATAAAGAAAat                                             >  1:1018681/1‑99 (MQ=255)

                                                        aaaTGTTTTCGAATTCACTTTTTTTATTGTTTAGCAAACTATGCACAATATTCAAACTTCCATTTGTTGATGGTCTGATGTTAAAGTATAAATAAAat                                             <  1:3327723/98‑1 (MQ=255)

                                                        aaaCGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAatta                                           <  2:493309/100‑1 (MQ=255)

                                                            tatatacatggaaataattttctttatactgagacatcaCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTc                                       >  2:3543102‑M1/40‑100 (MQ=255)

                                                            gTTTTCGAATGCTCTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTAttt                                        <  1:4045101/99‑1 (MQ=255)

                                                            gTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTc                                       <  1:2816188/100‑1 (MQ=255)

                                                              tttCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCa                                     <  2:1476861/100‑1 (MQ=255)

                                                              tttCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCa                                     >  2:257041/1‑100 (MQ=255)

                                                               ttCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCAt                                    >  2:2360000/1‑100 (MQ=255)

                                                                tCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATg                                   <  1:1149711/100‑1 (MQ=255)

                                                                 cGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGt                                  >  2:181925/1‑100 (MQ=255)

                                                                    aTGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGtata                               <  2:3378871/100‑1 (MQ=255)

                                                                    aTGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGtata                               <  1:1251744/100‑1 (MQ=255)

                                                                     tGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGtatat                              <  2:1747853/100‑1 (MQ=255)

                                                                      gCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGtatata                             >  1:3965771/1‑100 (MQ=255)

                                                                       cACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATaa                            >  2:4071796/1‑100 (MQ=255)

                                                                       cACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATaa                            >  2:1259934/1‑100 (MQ=255)

                                                                         ctctTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATaaaa                          >  1:770072/1‑100 (MQ=255)

                                                                         ctctTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATaaaa                          >  2:1559165/1‑100 (MQ=255)

                                                                           ctTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAATTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTACATGTATATaaa                           >  1:2835127/1‑97 (MQ=255)

                                                                            tttttATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAAc                       <  2:2693710/100‑1 (MQ=255)

                                                                            tttttATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAAc                       >  2:4382670/1‑100 (MQ=255)

                                                                             ttttATTGGTTAGCAAATCAAGCACCATGTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACt                      <  1:1627828/100‑1 (MQ=255)

                                                                             ttttATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACt                      >  2:759641/1‑100 (MQ=255)

                                                                              gtgcttGGTTTGCTAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTa                     >  1:1757713/5‑100 (MQ=255)

                                                                                tATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTaca                   <  2:1144956/100‑1 (MQ=255)

                                                                                 aTTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTacac                  <  1:3734069/100‑1 (MQ=255)

                                                                                  ttGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACg                 >  1:2613463/1‑100 (MQ=255)

                                                                                   tGGTTAGCAAACCTAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCAATGTATATAAAAAACTAAACGt                >  1:2709638/1‑100 (MQ=255)

                                                                                    ggTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTa               >  1:2042596/1‑100 (MQ=255)

                                                                                    ggTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTa               >  2:3928254/1‑100 (MQ=255)

                                                                                    ggTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTa               >  1:542564/1‑100 (MQ=255)

                                                                                    ggTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTa               >  1:742115/1‑100 (MQ=255)

                                                                                    ggTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTa               >  2:89074/1‑100 (MQ=255)

                                                                                       tAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAata            >  2:1058833/1‑100 (MQ=255)

                                                                                       tAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAata            <  1:3275433/100‑1 (MQ=255)

                                                                                         gCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAatata          >  2:2235748/1‑100 (MQ=255)

                                                                                           aaaCCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATg        >  1:1115777/1‑100 (MQ=255)

                                                                                            aaCCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATgg       <  2:407117/100‑1 (MQ=255)

                                                                                             aCCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGga      >  2:1091007/1‑100 (MQ=255)

                                                                                              ccAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGgag     <  2:3065984/100‑1 (MQ=255)

                                                                                               cAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGgaga    <  2:743532/100‑1 (MQ=255)

ATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAAT  >  NC_000913/2469955‑2470151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.