New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2950598 =NA (NA)20 (0.140) 7/158 NT NA intergenic (+25/+37) argA/recD amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain
?NC_000913 2950615 = NA (NA)noncoding (3/14 nt) REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 203 total aligned reads displayed.

TTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950499‑2950697
                                                                                                   |                                                                                                   
ttACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACa                                                                                                     <  1:2958438/100‑1 (MQ=255)
 tACTGCCGGAGCGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATATAGGGTAAGCGATGAAAATCGTCGGATGCGACAt                                                                                                    >  1:2311479/1‑100 (MQ=255)
 tACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACAt                                                                                                    >  2:64908/1‑100 (MQ=255)
  aCTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATg                                                                                                   <  1:138571/100‑1 (MQ=255)
     ncccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  1:3915605/2‑100 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  2:1825926/1‑100 (MQ=255)
      cccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                               >  1:4168885/1‑100 (MQ=255)
       ccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTaa                                                                                              >  2:2407318/1‑100 (MQ=255)
        cGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAac                                                                                             <  2:4139991/100‑1 (MQ=255)
        cGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAac                                                                                             >  2:4057705/1‑100 (MQ=255)
        cGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAac                                                                                             <  2:801458/100‑1 (MQ=255)
           gagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTCGGGGAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACt                                                                                          >  1:2877542/1‑100 (MQ=255)
            agCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTc                                                                                         <  1:3120701/100‑1 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATGCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAGATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  1:2647356/1‑100 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  1:3049962/1‑100 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  1:1109777/1‑100 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        <  2:1467720/100‑1 (MQ=255)
              cAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGt                                                                                       >  2:536955/1‑100 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      >  1:4038040/1‑100 (MQ=255)
                aaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTAc                                                                                     <  2:2813429/100‑1 (MQ=255)
                aaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGCAc                                                                                     >  2:4349028/1‑100 (MQ=255)
                 aaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACg                                                                                    <  2:1476040/100‑1 (MQ=255)
                   aGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTc                                                                                  >  1:3833702/1‑100 (MQ=255)
                    tcgccactcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCg                                                                                 <  1:2759614‑M1/21‑1 (MQ=255)
                    gCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGCTTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCg                                                                                 >  1:421550/1‑100 (MQ=255)
                    gCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCg                                                                                 >  2:2570698/1‑100 (MQ=255)
                     cAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGc                                                                                <  2:4168914/100‑1 (MQ=255)
                      aGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCa                                                                               <  2:2225440/100‑1 (MQ=255)
                       gTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCAt                                                                              >  1:1136318/1‑100 (MQ=255)
                         tGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:1199306/1‑100 (MQ=255)
                         tGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTAGGATGCGACATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:3025547/1‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:2298140‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:1387668‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:100907‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:3071482‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccgcatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:2110154‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaatcgtcggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:2960715‑M1/75‑100 (MQ=255)
                          gTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCg                                                                           >  2:1610686/1‑100 (MQ=255)
                          ctcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCg                                                                           >  2:2602560‑M1/74‑100 (MQ=255)
                            cgcactgcgcggcgctgtggtctggcggcgttgtttagttcacggtaataaacggaattgccggatgcgacCTGTGTAACACTCGTACGTCGCATc                                                                             >  1:1948100‑M1/72‑96 (MQ=255)
                               aCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAt                                                                      >  1:734764/1‑100 (MQ=255)
                                cTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAtt                                                                     >  1:3475241/1‑100 (MQ=255)
                                 tACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTa                                                                    >  1:4326438/1‑100 (MQ=255)
                                   agcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                  >  1:1766322‑M1/65‑100 (MQ=255)
                                     aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                <  1:3693483/100‑1 (MQ=255)
                                     aGCGTAAATAAAAAGTTTTGATTTCGGAGTTAGCGAAATCGATGAAAATCTTCGGATGCAACATGCGTAACACTCGTACGTCGCATCCGGCAATTACgct                                                                <  1:2723695/100‑3 (MQ=255)
                                      gCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGttt                                                               >  1:82168/1‑100 (MQ=255)
                                         tAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTAtt                                                            >  2:3922907/1‑100 (MQ=255)
                                            aTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTcc                                                          >  2:2644583/1‑99 (MQ=255)
                                              ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGt                                                       >  2:2670349/1‑100 (MQ=255)
                                                aaaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGa                                                     >  2:1086300/1‑100 (MQ=255)
                                                  aGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTCACACTCGTACGTCGCCTCCGGCGATTACGCTTATTACCGTGAAc                                                   >  1:3003829/1‑100 (MQ=255)
                                                  aGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAAc                                                   <  2:1280778/100‑1 (MQ=255)
                                                  aGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAAc                                                   <  2:2930894/100‑1 (MQ=255)
                                                  aGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAAc                                                   <  2:2064097/100‑1 (MQ=255)
                                                     gtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaa                                                >  2:137003/1‑100 (MQ=255)
                                                        gATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaaca                                             >  1:544047/1‑100 (MQ=255)
                                                        gATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaaca                                             <  1:2232742/100‑1 (MQ=255)
                                                        gATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaaca                                             >  1:995122/1‑100 (MQ=255)
                                                         aTGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaa                                            >  2:1328138/1‑100 (MQ=255)
                                                          tGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaac                                           >  1:2072461/1‑100 (MQ=255)
                                                          tGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaac                                           <  2:2029479/100‑1 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         >  1:3409289/1‑100 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         >  1:1487502/1‑100 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         >  1:2036692/1‑100 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         <  2:499138/100‑1 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         <  2:3496470/100‑1 (MQ=255)
                                                               gATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgccgc                                      <  2:3277843/100‑1 (MQ=255)
                                                               gATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgccgc                                      <  2:4028010/100‑1 (MQ=255)
                                                                 tttAGGGTAAGCGATGAAAATCGTCGGATGGGACATGCGTAACACTCGTACGTCGCATCCGGCAATTCCGTTTATTCCCGTTAACTAAACAACGCAGCCa                                    >  1:2889928/1‑100 (MQ=255)
                                                                 tttAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCa                                    >  1:1768522/1‑100 (MQ=255)
                                                                 tttAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCa                                    <  1:16543/100‑1 (MQ=255)
                                                                  ttAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAg                                   <  1:2494299/100‑1 (MQ=255)
                                                                   tAGGGTAAGCGATGGAAATCGTCGGTTGTGAAATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGa                                  <  1:325169/100‑1 (MQ=255)
                                                                   tAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGa                                  >  2:1753796/1‑100 (MQ=255)
                                                                    aGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAc                                 <  1:1067104/100‑1 (MQ=255)
                                                                    aGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAc                                 <  2:1889721/100‑1 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                <  2:2357886/100‑1 (MQ=255)
                                                                      ggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCa                               >  1:626580/1‑100 (MQ=255)
                                                                      ggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCa                               >  2:3664159/1‑100 (MQ=255)
                                                                       gTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGGTTATTCCCGTGAACTAAACAACGCCGCCAGACCAc                              >  1:3663993/1‑100 (MQ=255)
                                                                          aGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgc                           >  1:3515817/1‑100 (MQ=255)
                                                                           gCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcg                          <  1:3131935/100‑1 (MQ=255)
                                                                            cGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcgc                         >  2:3846989/1‑100 (MQ=255)
                                                                             gATGAAAATCGTAGGATGGGAGATGCGTAACGCTTGTACGTCGCATCGGGCAAATACGTTTATTCCAGTGAACTAAACAACGCCGCCAGACCAccg                            >  1:3962963/1‑94 (MQ=255)
                                                                                 aaaaTCGTCGGATGCGACATGTGTAACACTCGTACGTCGGATGCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgccg                       <  1:4083430/97‑1 (MQ=255)
                                                                                 aaaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTc                    >  1:4297084/1‑100 (MQ=255)
                                                                                  aaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTc                    <  1:1794779/99‑1 (MQ=255)
                                                                                     tcgtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTa                <  1:1177479/100‑1 (MQ=255)
                                                                                     tcgtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTa                <  2:1667537/100‑1 (MQ=255)
                                                                                       gtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACg              >  2:342107/1‑100 (MQ=255)
                                                                                       gtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACg              >  2:3132892/1‑100 (MQ=255)
                                                                                           gatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTg          <  1:2609603‑M1/92‑1 (MQ=255)
                                                                                            atgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTgg         <  2:2811450‑M1/93‑1 (MQ=255)
                                                                                             tgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGc        >  2:1510499‑M1/7‑100 (MQ=255)
                                                                                             tgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGc        <  1:2367834‑M1/94‑1 (MQ=255)
                                                                                             tgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGc        >  2:2140481‑M1/7‑100 (MQ=255)
                                                                                              gcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCg       >  1:1902280‑M1/6‑100 (MQ=255)
                                                                                                gacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGAt     >  1:2321718‑M1/4‑100 (MQ=255)
                                                                                                   aTGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGc  <  2:3337646/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950499‑2950697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.