| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3392342 | NA (NA) | 29 (0.200) +CTACAAACG |
8/160 | NT | NA | noncoding (267/308 nt) | REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences | REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences |
| ? | NC_000913 | = 3392393 | NA (NA) | intergenic (‑365/+65) | tldD/yhdP | putative peptidase/DUF3971‑AsmA2 domains protein | |||||
Only 100 of 351 total aligned reads displayed.
GCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATT > NC_000913/3392243‑3392441 | tatcaggcctagaaacggaacataaccgtaggtcggataaggcgtttacgccgcatccgacagccgttgcctgatAAGACGCACAGCGTCGCATCAGGc < 1:1220605‑M2/24‑1 (MQ=255) tatcaggactacaaacggaacataaccgtaggtcggataaggcgtttacgccgcatccggcagccgttgcctgatAAGACGCACAGCGTCGCATCAGGc < 2:1003677‑M2/24‑1 (MQ=255) cAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTATGCCTGATAAGACGCACAGCGTCGTGTCAGGCAACAGCt > 1:193159/1‑99 (MQ=11) cAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGGCTGTATGCCTTATAAGACCCACAGCCCCCCATCAGGCAACCGc > 1:329567/1‑98 (MQ=11) ggCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCgg < 1:676140/100‑1 (MQ=32) ggCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCgg < 2:1436000/100‑1 (MQ=32) ggCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCg > 1:1569226/1‑99 (MQ=33) gttGCCTGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGa > 2:4160157/3‑100 (MQ=2) gttGCCTGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGa > 2:2202559/3‑100 (MQ=2) cTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGAt < 1:1000123/100‑1 (MQ=32) aggtcggataaggcgtttacgccgcatccggcCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGAt > 1:354187‑M2/33‑100 (MQ=255) gtcggataaggcgtttacgccgcatccgacCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACCGCGTCGCATCAGGCAACGGCTGCCGGATgc > 1:3110682‑M2/31‑100 (MQ=255) gtcggataaggcgtttacgccgcatccgacCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATgc > 2:3346756‑M2/31‑100 (MQ=255) gCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCCGGCAGCCGTTGCCTGATgc < 1:2037930/100‑1 (MQ=11) tGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTg < 2:4364643/100‑1 (MQ=11) gcggcgTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGa > 2:2152682/1‑100 (MQ=31) gcggcgCAAACGCCTCATCCGACCAACGGTTATGTCCCGTCGGTAGGCCTGATAAGACGCACAGCGGCGCATCAGGCAACGGCTGCCGGATGCGGCGTGa < 1:1464462/100‑1 (MQ=11) ggcgTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAAc < 2:4248352/100‑1 (MQ=32) gcgtttacgccgcatccgacCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACg < 2:1324205‑M2/80‑1 (MQ=255) gcgTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAAc > 2:1348059/1‑99 (MQ=32) tAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGccc < 2:533805/100‑1 (MQ=35) tAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGccc < 1:3627817/100‑1 (MQ=35) aggtcggataaggggtttacgccccatccggcagccgttgcctggtTAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAAcgcctt < 2:243984‑M2/54‑3 (MQ=255) aaCGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGCGAACGCCCTa > 2:251237/1‑100 (MQ=25) aCGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTAt > 2:2185405/1‑100 (MQ=38) aCGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTAt < 2:3551816/100‑1 (MQ=38) cGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGGTGCGGCGTGAACGCCCTATc > 2:3612961/1‑100 (MQ=25) ccTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCg > 2:2045943/1‑100 (MQ=38) ttATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGAc > 2:3626018/1‑100 (MQ=38) ccgacCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCCTATCCGACCTAc > 1:546729‑M2/6‑100 (MQ=255) cgacCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACg > 1:3760715‑M2/5‑100 (MQ=255) cgacCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACg > 1:2701810‑M2/5‑100 (MQ=255) cCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGtt < 1:2628490‑M2/99‑1 (MQ=255) cCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGtt < 2:4103735‑M2/99‑1 (MQ=255) tACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGt > 1:3906930/1‑97 (MQ=38) tACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTAt > 1:503288/1‑100 (MQ=35) tACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACCGCTGCCGGATGCGGCGTGAACGCCCTATCTGACCTACGGGTAt > 2:733615/1‑100 (MQ=255) cGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTAt < 1:3752554/98‑1 (MQ=38) cGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGt < 2:3443394/100‑1 (MQ=38) tGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGc > 1:2252894/1‑100 (MQ=255) tGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGc > 2:1545128/1‑100 (MQ=255) tGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGc < 2:1505741/100‑1 (MQ=255) gTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCt > 2:3175268/1‑100 (MQ=255) ttCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCCGGCAACGACTGCCGGCTCCGGCGTGAACGCCCTATCCGCCCCACGGTTATGTTCTGGCTc > 1:427191/1‑100 (MQ=14) tCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCg < 2:1828650/100‑1 (MQ=255) ccGTTTGTAGGCCTTATACGACGCACCGCGCCGCCTCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGt < 1:4135818/100‑1 (MQ=17) ccGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGt < 2:1579369/100‑1 (MQ=255) cGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGtt > 1:2214579/1‑100 (MQ=255) gTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCctacaaacggaacatacccgtaggtcggataaggcgtttacgccgcatccggcagccgttg > 1:449436‑M1/1‑39 (MQ=255) gTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTg < 1:187792/100‑1 (MQ=255) ttGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAATGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGc < 1:2917139/100‑1 (MQ=255) gTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCCTATCCGACCTACGGTTATGTTCCGGCTCGTTgccta > 1:2090809/1‑96 (MQ=255) aGGCCTGATAAGACGCACAGCGTCGCATCAGGCctacaaacggaacataaccgtaggtcggataaggcgtttacgccgcatccgacagccgttgcctgat > 2:2002060‑M1/1‑33 (MQ=255) ggCCTGATAAGACGCACAGCGTCGCATCAGGCctacaaacggaacataaccgtaggtcggataaggcgtttacgccgcatccggcagccgttgcctgatg > 2:2614132‑M1/1‑32 (MQ=255) ggCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCG‑TGGCCttt > 1:297894/1‑98 (MQ=255) gcctgatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTgg < 1:875911‑M2/93‑1 (MQ=255) gcctgatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTgg < 2:2740789‑M2/93‑1 (MQ=255) gCCTGATAAGACGCACAGCGTCGCATCAGGCctacaaacggaacataaccgtaggtcggataaggcgtttacgccgcatccggcagccgttgcctgatgc > 1:853336‑M1/1‑31 (MQ=255) gCCTGATAAGACGCACAGCGTCGCATCAGGCctacaaacggaacataaccgtaggtcggataaggcgtttacgccgcatccggcagccgttgcctgatgc > 2:2784551‑M1/1‑31 (MQ=255) gCCTGATAAGACGCACAGCGTCGCATCAGGCctacaaacggaacataaccgtaggtcggataaggcgtttacgccgcatccggcagccgttgcctgatgc > 1:1186652‑M1/1‑31 (MQ=255) cgtgatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGc > 2:2986607‑M2/7‑100 (MQ=255) cctgatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGc < 2:2813112‑M2/94‑1 (MQ=255) cctgatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGc > 2:3840010‑M2/7‑100 (MQ=255) cctgatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCCTATCCGACCTACGGTTATGttctggctgtaggcc > 1:3814846‑M2/7‑86 (MQ=255) tgatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCaa > 1:2827020‑M2/5‑100 (MQ=255) gatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAAc > 2:3660836‑M2/4‑100 (MQ=255) gatAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCCTATCCGACCTACGGTTATGTTCCGGCTCGTTGCCCgtt > 1:1337241‑M2/4‑94 (MQ=255) atAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACg < 1:1714496‑M2/98‑1 (MQ=255) aaGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGAt > 2:2235882/1‑100 (MQ=255) aaGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGAt < 2:3733438/100‑1 (MQ=255) aGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGAtt > 1:3933677/1‑100 (MQ=255) gACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGAtt > 1:315407/1‑99 (MQ=255) cGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTAtn < 2:3910144/100‑2 (MQ=255) gCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATcc < 2:2946468/100‑1 (MQ=255) gCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATcc < 2:757848/100‑1 (MQ=255) gCACAGCGTCGCATCAGGCAACGGATGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATcc < 2:1929156/100‑1 (MQ=255) cacaGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCt < 2:511311/100‑1 (MQ=255) cacaGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCt > 2:3065614/1‑100 (MQ=255) aGCGTCGCATCTGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATg < 2:1696372/100‑1 (MQ=255) aGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATg < 1:3437706/100‑1 (MQ=255) gCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATga < 2:1074501/100‑1 (MQ=255) gCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATga < 1:2503878/100‑1 (MQ=255) gCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggc > 2:2294197‑M2/1‑60 (MQ=255) gCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggc > 2:432283‑M2/1‑60 (MQ=255) gCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggc > 2:232933‑M2/1‑60 (MQ=255) gCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTg > 2:2667178/1‑100 (MQ=255) gCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTg > 2:4035786/1‑100 (MQ=255) gCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggc > 1:2738419‑M2/1‑60 (MQ=255) gCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggc > 2:442712‑M2/1‑60 (MQ=255) gCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatacgacgctgtgcgtcttatcaggc > 2:2059808‑M2/1‑60 (MQ=255) cATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggcc > 1:2125132‑M2/1‑59 (MQ=255) cATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGGCCTACGGTTATGGTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTgg > 1:2467830/1‑100 (MQ=255) cATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTgg > 2:4307410/1‑100 (MQ=255) cATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTgg > 2:165754/1‑100 (MQ=255) cATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggcc > 1:1037704‑M2/1‑59 (MQ=255) cATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggcc > 2:2614962‑M2/1‑59 (MQ=255) aTCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTggg < 2:951071/100‑1 (MQ=255) aTCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggcct > 2:288021‑M2/1‑58 (MQ=255) tCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTgggg < 1:4314983/100‑1 (MQ=255) cAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTgggag > 1:1099940/1‑98 (MQ=255) | GCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATT > NC_000913/3392243‑3392441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |