New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3781698 =NA (NA)9 (0.060) 5/164 NT NA noncoding (1/29 nt) REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3781727 = NA (NA)intergenic (+39/+14) trmL/cysE tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent/serine acetyltransferase

Only 100 of 210 total aligned reads displayed.

CGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCA  >  NC_000913/3781599‑3781796
                                                                                                   |                                                                                                  
accagacagcgataagccatcaatggatatggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtg                                                                                                    >  2:1307542‑M1/100‑100 (MQ=255)
 gcagcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGc                                                                                                   <  2:3079148/100‑1 (MQ=255)
 ccagacagcgataagccatcaatggatatggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGc                                                                                                   <  1:2651111‑M1/2‑1 (MQ=255)
   agcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCg                                                                                                 <  2:52404/100‑1 (MQ=255)
   agacagcgataagccatcaatggatatggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCg                                                                                                 >  2:3076048‑M1/97‑100 (MQ=255)
   agacagcgataagccatcaatggatatggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCg                                                                                                 >  2:2488826‑M1/97‑100 (MQ=255)
    gacagggataggccatcaatggatatggacgagcatttaaacggtattaaccatacagttgagtatggggatgggatctaatgtcctgtgatcgtGCCgg                                                                                                >  1:3560875‑M1/96‑100 (MQ=255)
     caTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGa                                                                                               <  2:4376025/100‑1 (MQ=255)
      cagcgataagccatcaatggatatggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGAt                                                                                              <  1:4327291‑M1/7‑1 (MQ=255)
      aTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGAt                                                                                              <  1:2178902/100‑1 (MQ=255)
      aTGAATCTGTCCAATGCGGTGTCGGTAGGGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGAt                                                                                              <  1:725520/100‑1 (MQ=255)
       tGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATa                                                                                             <  2:1800603/100‑1 (MQ=255)
       tGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATa                                                                                             <  2:2865814/100‑1 (MQ=255)
           tCTGGCCAATGCGGTGTCGGTAGGGGTTTATGACGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatg                                                                                         <  1:2032120/100‑1 (MQ=255)
             tctCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgat                                                                                       <  1:2663184/98‑1 (MQ=255)
             tGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgat                                                                                       <  2:3957310/100‑1 (MQ=255)
              gTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCGGGGAGCGGTATTGAGGGATTAGTTACTGTAGGCCGGATAgatgagt                                                                                      >  2:3887216/1‑98 (MQ=255)
              gTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGAtt                                                                                      <  2:1577159/100‑1 (MQ=255)
                    tGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATc                                                                                 >  1:1424942/1‑99 (MQ=255)
                             tggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgagcgtGCCGGATAGATGATTACATCGCATCCGGCa                                                                       >  1:3942695‑M1/71‑100 (MQ=255)
                             ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                       >  2:4084366/1‑100 (MQ=255)
                             ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                       >  2:2324557/1‑100 (MQ=255)
                              ggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatcttatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCAc                                                                      >  1:2439736‑M1/70‑100 (MQ=255)
                               gaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCACg                                                                     >  1:1871283‑M1/69‑100 (MQ=255)
                                  tggtgTATTAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                  <  1:1362281/100‑1 (MQ=255)
                                  tggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGCTTAGTTACTCTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                  <  1:519710/100‑1 (MQ=255)
                                   ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                 >  1:1488715/1‑100 (MQ=255)
                                     tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTATGCCGGATAGATGATTACATCGCATACGGCACGATcaca                                                               <  1:2713222/100‑1 (MQ=255)
                                     tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                               >  2:3352646/1‑100 (MQ=255)
                                     tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                               <  1:1188183/100‑1 (MQ=255)
                                     tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                               >  2:3258179/1‑100 (MQ=255)
                                      gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                              >  2:146663/1‑100 (MQ=255)
                                       tttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCACGATCACAgg                                                             >  1:273597‑M1/61‑100 (MQ=255)
                                       tATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAgg                                                             >  2:3120953/1‑100 (MQ=255)
                                        aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGa                                                            <  1:370902/100‑1 (MQ=255)
                                         tGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                              >  1:1036154/1‑97 (MQ=255)
                                         tGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGAc                                                           <  2:4300605/100‑1 (MQ=255)
                                            aGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACAtt                                                        <  1:2488393/100‑1 (MQ=255)
                                             gCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTa                                                       <  1:970038/100‑1 (MQ=255)
                                               cTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGa                                                     >  1:2848261/1‑100 (MQ=255)
                                                tGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                    <  2:1083661/100‑1 (MQ=255)
                                                tGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                    >  2:779730/1‑100 (MQ=255)
                                                 ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                    <  1:2540826/99‑1 (MQ=255)
                                                  gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                  <  1:868795/100‑1 (MQ=255)
                                                  gcggcAGTTGGGGTATCCGGGAGCGGGATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                  <  1:4282714/100‑1 (MQ=255)
                                                   ctgaaGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGCTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGCACATTAGatccc                                                 >  1:772180/5‑100 (MQ=255)
                                                      cAGTTGGGGTATTCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatc                                              >  1:110687/1‑100 (MQ=255)
                                                       aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                             >  2:3981232/1‑100 (MQ=255)
                                                       aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                             >  2:3219211/1‑100 (MQ=255)
                                                       aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                             >  2:3146917/1‑100 (MQ=255)
                                                        gTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatccc                                            >  2:4385390/1‑100 (MQ=255)
                                                        gTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatccc                                            >  2:955167/1‑100 (MQ=255)
                                                        gTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatccc                                            >  2:1403772/1‑100 (MQ=255)
                                                           ggggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCAt                                         <  1:1322984/100‑1 (MQ=255)
                                                            gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        >  2:426065/1‑100 (MQ=255)
                                                            gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        >  1:85501/1‑100 (MQ=255)
                                                            gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        >  1:1254250/1‑100 (MQ=255)
                                                             ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                       <  1:3872023/100‑1 (MQ=255)
                                                             ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                       <  2:2412195/100‑1 (MQ=255)
                                                             ggTATACGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                       <  1:1465830/100‑1 (MQ=255)
                                                              gTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACt                                      >  1:3153324/1‑100 (MQ=255)
                                                                aTCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCa                                    >  2:370096/1‑100 (MQ=255)
                                                                   cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                 <  2:2738047/100‑1 (MQ=255)
                                                                    gggAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATg                                <  2:2138060/100‑1 (MQ=255)
                                                                      gatctgTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTa                              <  2:3532501/95‑1 (MQ=255)
                                                                      gAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAcatttgagta                              <  2:1875775/100‑10 (MQ=255)
                                                                       aGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTGGATCCCATCCCCATACTCAAATGTAt                             <  1:30586/100‑1 (MQ=255)
                                                                        gCGGTATTGCGAGATTAGTTACTGTACGCCGGATAGATGATTCCATCGCATCCGGCACGATACCAGGACATTAACTCCCATCCCCATACTCAACTGt                               >  1:3610326/1‑97 (MQ=255)
                                                                        gCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATg                            >  2:676023/1‑100 (MQ=255)
                                                                           gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                         >  2:1563024/1‑100 (MQ=255)
                                                                               tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                     >  1:3236643/1‑100 (MQ=255)
                                                                               tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                     >  1:941961/1‑100 (MQ=255)
                                                                               tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                     >  2:1716340/1‑100 (MQ=255)
                                                                                gtgagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  2:2977534/3‑100 (MQ=255)
                                                                                gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  2:2646816/1‑100 (MQ=255)
                                                                                 agagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAcc                   >  2:3028769/1‑100 (MQ=255)
                                                                                 agagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAcc                   >  1:2761108/1‑100 (MQ=255)
                                                                                  gagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCg                  >  2:2584155/1‑100 (MQ=255)
                                                                                   agaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCCTCCGGCACGATCACACGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCg                  <  2:635481/99‑1 (MQ=255)
                                                                                   agaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGt                 <  1:798732/100‑1 (MQ=255)
                                                                                     aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg               <  2:1943004/100‑1 (MQ=255)
                                                                                     aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg               <  2:3888808/100‑1 (MQ=255)
                                                                                     aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg               <  1:653296/100‑1 (MQ=255)
                                                                                     aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg               <  2:764612/100‑1 (MQ=255)
                                                                                      ttAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGa              <  2:2377691/100‑1 (MQ=255)
                                                                                       tAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGaa             <  1:2831208/100‑1 (MQ=255)
                                                                                         gTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAAt           >  2:483485/1‑100 (MQ=255)
                                                                                           tACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGc         >  1:2191793/1‑100 (MQ=255)
                                                                                            aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGc         <  1:1586072/99‑1 (MQ=255)
                                                                                            aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt        <  1:2751570/100‑1 (MQ=255)
                                                                                            aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt        <  2:2394310/100‑1 (MQ=255)
                                                                                            aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCAAGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt        >  1:2344372/1‑100 (MQ=255)
                                                                                             cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg       >  1:1723365/1‑100 (MQ=255)
                                                                                              tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg      <  1:229784/100‑1 (MQ=255)
                                                                                              tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg      <  2:3803470/100‑1 (MQ=255)
                                                                                                tAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt        <  1:2931050/96‑1 (MQ=255)
                                                                                                tAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTc    <  2:1215848/100‑1 (MQ=255)
                                                                                                 aGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc   <  1:3130129/100‑1 (MQ=255)
                                                                                                  ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa  >  2:4217800/1‑100 (MQ=255)
                                                                                                  ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa  >  2:2474247/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
CGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCA  >  NC_000913/3781599‑3781796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.