BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3781698 =	NA (NA)	9 (0.060)	5/164	NT	NA	noncoding (1/29 nt)	REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3781727 =	NA (NA)	9 (0.060)	5/164	NT	NA	intergenic (+39/+14)	trmL/cysE	tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent/serine acetyltransferase

Only 100 of 216 total aligned reads displayed.

GGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGT  >  NC_000913/3781628‑3781825

tggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCa                                                                                                    >  2:3130251‑M1/71‑100 (MQ=255)

tggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgagcgtGCCGGATAGATGATTACATCGCATCCGGCa                                                                                                    >  1:3942695‑M1/71‑100 (MQ=255)

ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                                                    >  2:4084366/1‑100 (MQ=255)

ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                                                    >  2:2324557/1‑100 (MQ=255)

  tAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACg                                                                                                  <  2:2491024/100‑1 (MQ=255)

     tggtgTATTAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                                               <  1:1362281/100‑1 (MQ=255)

     tggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                                               >  1:1268578/1‑100 (MQ=255)

      ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                                              >  1:1488715/1‑100 (MQ=255)

        tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTATGCCGGATAGATGATTACATCGCATACGGCACGATcaca                                                                                            <  1:2713222/100‑1 (MQ=255)

        tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                                                            <  1:1188183/100‑1 (MQ=255)

        tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                                                            >  2:3352646/1‑100 (MQ=255)

        tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                                                            >  2:3258179/1‑100 (MQ=255)

         gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                                                           >  2:146663/1‑100 (MQ=255)

         gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                                                           <  1:2185756/100‑1 (MQ=255)

          tATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAgg                                                                                          <  2:2387747/100‑1 (MQ=255)

           aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGa                                                                                         <  1:370902/100‑1 (MQ=255)

           aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATGGAGAGGTTAGATACTGTAGGCCGGATAGATGATTGCATCGCATCCGGCACGATcaacgga                                                                                         >  1:2671189/1‑95 (MQ=255)

            tGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                                                           >  1:1036154/1‑97 (MQ=255)

            tGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGAc                                                                                        <  2:4300605/100‑1 (MQ=255)

             gAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACa                                                                                       >  1:3589275/1‑100 (MQ=255)

              aaGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGAc                                                                                        >  1:672237/1‑98 (MQ=255)

               aGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACAtt                                                                                     <  1:2488393/100‑1 (MQ=255)

                gCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATGCGGGACGATCACAGGACATTa                                                                                    >  1:2006098/1‑100 (MQ=255)

                gCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTa                                                                                    <  1:970038/100‑1 (MQ=255)

                  cTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGa                                                                                  >  1:2848261/1‑100 (MQ=255)

                   tGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                                                 <  2:1083661/100‑1 (MQ=255)

                   tGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                                                 >  2:779730/1‑100 (MQ=255)

                   tGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGa                                                                                  >  1:171716/1‑99 (MQ=255)

                    ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                                                <  1:2983955/100‑1 (MQ=255)

                    ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                                                 <  1:2540826/99‑1 (MQ=255)

                      ctgaaGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGCTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGCACATTAGatccc                                                                              >  1:772180/5‑100 (MQ=255)

                        gcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccat                                                                            <  2:3479861/100‑1 (MQ=255)

                         cAGTTGGGGTATTCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatc                                                                           >  1:110687/1‑100 (MQ=255)

                          aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                                                          >  2:3146917/1‑100 (MQ=255)

                          aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                                                          >  2:3981232/1‑100 (MQ=255)

                          aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                                                          >  2:3219211/1‑100 (MQ=255)

                           gTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatccc                                                                         >  2:1403772/1‑100 (MQ=255)

                           gTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatccc                                                                         >  2:4385390/1‑100 (MQ=255)

                              ggggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCAt                                                                      <  1:1322984/100‑1 (MQ=255)

                               gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                                                     >  2:3091590/1‑100 (MQ=255)

                               gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                                                     >  1:85501/1‑100 (MQ=255)

                               gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                                                     >  2:426065/1‑100 (MQ=255)

                                ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                                                    >  2:3558546/1‑100 (MQ=255)

                                ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                                                    <  2:2412195/100‑1 (MQ=255)

                                ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                                                    <  1:3872023/100‑1 (MQ=255)

                                   aTCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCa                                                                 >  2:370096/1‑100 (MQ=255)

                                      cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                                              <  2:2738047/100‑1 (MQ=255)

                                         gAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAcatttgagta                                                           <  2:1875775/100‑10 (MQ=255)

                                           gCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATg                                                         >  2:676023/1‑100 (MQ=255)

                                              gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTaagatc                                                      >  1:3532482/1‑95 (MQ=255)

                                              gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                                                      >  2:1563024/1‑100 (MQ=255)

                                               tATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTa                                                     <  1:546329/100‑1 (MQ=255)

                                               tATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTa                                                     <  2:45771/100‑1 (MQ=255)

                                                 ttGAGAGATTAGTTACTGAAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAAt                                                   <  1:1732137/100‑1 (MQ=255)

                                                  tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                                                  >  1:941961/1‑100 (MQ=255)

                                                  tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                                                  >  2:1716340/1‑100 (MQ=255)

                                                    agagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAcc                                                >  1:2761108/1‑100 (MQ=255)

                                                     gagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCg                                               >  2:2584155/1‑100 (MQ=255)

                                                      agaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCCTCCGGCACGATCACACGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCg                                               <  2:635481/99‑1 (MQ=255)

                                                        aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg                                            <  2:764612/100‑1 (MQ=255)

                                                        aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg                                            <  2:3888808/100‑1 (MQ=255)

                                                          tAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGaa                                          <  1:2831208/100‑1 (MQ=255)

                                                           cctgtgatcgtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGaaa                                         >  1:273597‑M2/41‑100 (MQ=255)

                                                           aGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGaaa                                         <  1:1430771/100‑1 (MQ=255)

                                                              tACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGc                                      >  2:2113499/1‑100 (MQ=255)

                                                               aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGc                                      <  1:1586072/99‑1 (MQ=255)

                                                               aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt                                     <  1:2751570/100‑1 (MQ=255)

                                                               aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCAAGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt                                     >  1:2344372/1‑100 (MQ=255)

                                                                 tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg                                   <  1:229784/100‑1 (MQ=255)

                                                                 tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg                                   <  2:3803470/100‑1 (MQ=255)

                                                                   tAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTc                                 <  2:1215848/100‑1 (MQ=255)

                                                                    gtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc                                >  1:791037‑M2/32‑100 (MQ=255)

                                                                    gtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc                                >  2:1895342‑M2/32‑100 (MQ=255)

                                                                    gtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc                                >  2:1639223‑M2/32‑100 (MQ=255)

                                                                    gtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATAAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc                                >  1:2439736‑M2/32‑100 (MQ=255)

                                                                    aGGCCGGTTAGATGCTTACATCGCATCCGGCACGATCCCGGGTTATCCGATCCCATCCCCATACTGAAATGTATGGTTAATACGGTTGAAACGCTGGt                                  >  1:3202657/1‑98 (MQ=255)

                                                                    aGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc                                <  1:3130129/100‑1 (MQ=255)

                                                                     ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                               >  2:4217800/1‑100 (MQ=255)

                                                                       CCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCata                             <  1:2225173‑M1/100‑1 (MQ=255)

                                                                        cGGATAGATGATTACTTCGCATCCGGCACGCTCGCAGGACATTAGATCCCATCCAGATGCTCATATGTATGGTTCATGCCGTGGAAATGCTGGTcc                                <  1:4212806/96‑1 (MQ=255)

                                                                        CGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCAATACTCAAATGTATGGTTACTACCGTTGACATGATGGTcc                                <  1:4183067‑M1/96‑1 (MQ=255)

                                                                             aGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCAtt                       <  1:518851/100‑1 (MQ=255)

                                                                              gatgatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTg                      >  2:3376210/1‑100 (MQ=255)

                                                                                tgatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGAt                    >  2:2370981/1‑100 (MQ=255)

                                                                                tgatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGAt                    >  1:4069977/1‑100 (MQ=255)

                                                                                 gatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATg                   <  1:1846006/100‑1 (MQ=255)

                                                                                   ttACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGc                 <  1:1875547/100‑1 (MQ=255)

                                                                                    tACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCt                <  2:2961014/100‑1 (MQ=255)

                                                                                       aacGCATCTGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTAt             >  2:2978116/3‑100 (MQ=255)

                                                                                       aTCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCAttagatcggaag             >  1:1654354/1‑90 (MQ=255)

                                                                                        tCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATc            <  1:3773912/100‑1 (MQ=255)

                                                                                         cGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCg           <  2:2214870/100‑1 (MQ=255)

                                                                                          gCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGc          >  1:3705931/1‑100 (MQ=255)

                                                                                          gCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGc          >  2:4014745/1‑100 (MQ=255)

                                                                                            atccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTg        <  1:4327291‑M2/93‑1 (MQ=255)

                                                                                               cggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCt     <  1:3964567‑M2/96‑1 (MQ=255)

                                                                                               cggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCt     >  2:2488762‑M2/5‑100 (MQ=255)

                                                                                               cggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCt     >  2:3076048‑M2/5‑100 (MQ=255)

                                                                                                 gcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTgg   <  1:2651111‑M2/98‑1 (MQ=255)

                                                                                                  cACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGt  >  2:1307542‑M2/2‑100 (MQ=255)

GGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGT  >  NC_000913/3781628‑3781825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.