| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3943479 | 21 (0.130) | 24 (0.160) | 11/166 | NT | 55.1% | noncoding (45/76 nt) | gltU | tRNA‑Glu |
| ? | NC_000913 | = 4168397 | NA (NA) | noncoding (26/76 nt) | gltT | tRNA‑Glu | |||||
ACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGA > NC_000913/3943380‑3943577 | acaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGT < 2:2232705‑M1/100‑1 (MQ=255)acaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGT < 1:3185930‑M1/100‑1 (MQ=255) caGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTa > 1:746441/1‑100 (MQ=33) gATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAAc > 2:3789213/1‑100 (MQ=33) tGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAgg < 1:77865/100‑1 (MQ=33) tGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAgg < 1:3776884/100‑1 (MQ=33) tGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGACCAGGACACCGCCCTTTCACGGCGGTAACAgg > 1:1326546/1‑100 (MQ=18) gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCGTGAAAGGGCGGTgtcctgg < 2:1777571‑M1/100‑8 (MQ=255) gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCGTGAAAGGGCGGTgtcctgg < 2:499467‑M1/100‑8 (MQ=255) gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAggg > 1:722339/1‑100 (MQ=33) gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAggg < 1:963175/100‑1 (MQ=33) gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAggg > 1:372541/1‑100 (MQ=32) tCTGTTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAgggg > 1:3941703/1‑100 (MQ=18) tCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCGTGAAAGGGCGGTgtcctggg < 2:3898974‑M1/100‑9 (MQ=255) tCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCGTGAAAGGGCGGTgtcctggg < 1:2903749‑M1/100‑9 (MQ=255) cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt > 1:701856/1‑100 (MQ=33) cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt > 2:1045542/1‑100 (MQ=33) cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt > 2:2786772/1‑100 (MQ=33) cTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCATTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAgggg > 1:449974/1‑99 (MQ=18) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGtt > 1:1874623/1‑100 (MQ=33) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCTTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc < 1:2438738/100‑1 (MQ=18) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc < 1:3978042/100‑1 (MQ=33) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc < 1:3238076/100‑1 (MQ=32) tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa < 1:3057984/100‑1 (MQ=33) aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa < 2:1152397/100‑1 (MQ=32) aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa < 1:3563990/100‑1 (MQ=32) aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa < 1:831200/100‑1 (MQ=32) gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATTCGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc < 2:3189480/100‑1 (MQ=11) gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc > 1:2391538/1‑100 (MQ=11) gTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgt > 2:596498‑M1/1‑36 (MQ=255) ggCCCAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggt > 1:2105330‑M1/1‑29 (MQ=255) cccAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtga > 1:955324‑M1/1‑27 (MQ=255) cccAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtga > 1:1192656‑M1/1‑27 (MQ=255) cccAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtga > 2:3620210‑M1/1‑27 (MQ=255) ccAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgag > 2:2230774‑M1/1‑26 (MQ=255) ccAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgag > 1:4022485‑M1/1‑26 (MQ=255) ccAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggt > 1:1315184‑M1/1‑26 (MQ=255) cAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtcgggtgagc > 1:2661157‑M1/1‑25 (MQ=255) cAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagc > 1:2957230‑M1/1‑25 (MQ=255) cAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagc > 2:3859852‑M1/1‑25 (MQ=255) cAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagc > 1:1386422‑M1/1‑25 (MQ=255) cAGGACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagc > 2:1240835‑M1/1‑25 (MQ=255) gACACCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagcttt > 1:1438532‑M1/1‑22 (MQ=255) acacCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttc > 2:2351000‑M1/1‑21 (MQ=255) acacCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttc > 2:1023546‑M1/1‑21 (MQ=255) acacCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttc < 2:1386427‑M1/100‑80 (MQ=255) acacCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgcgtagggtgagctttc > 1:843912‑M1/1‑21 (MQ=255) acacCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgtcgcgtgatattttcgtgtagggtgagctttc > 1:1286142‑M1/1‑21 (MQ=255) cacCGCCCTTTCACGGCGGTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttca > 1:2588989‑M1/1‑20 (MQ=255) ggcggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcga > 2:3461207‑M1/1‑6 (MQ=255) gcggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcg > 2:3118760‑M1/1‑5 (MQ=255) ctgtgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaac < 1:3230300‑M1/98‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcac < 2:111212‑M1/100‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcac < 2:2066379‑M1/100‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcac < 2:1277048‑M1/100‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcac < 1:413678‑M1/100‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcac < 1:1540994‑M1/100‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcac < 2:755339‑M1/100‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaac < 2:3182583‑M1/100‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaac < 1:2472644‑M1/100‑97 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatatttgcgtgtagggtgagctttcattaatagaaagcgaac > 1:2738707‑M1/1‑4 (MQ=255) cggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgagattttcgtgtagggtgagctttctattaatgaaagctcac < 1:188228‑M1/100‑97 (MQ=255) cggGgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcac < 1:2376727‑M1/100‑97 (MQ=255) ggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcacc < 2:2925620‑M1/100‑98 (MQ=255) ggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacg < 2:93647‑M1/100‑98 (MQ=255) ggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacg > 1:169703‑M1/1‑3 (MQ=255) ggTgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgtggcgtgatattttcgtgtagggtgagctttctattaatgaaagctcac < 1:2185138‑M1/99‑97 (MQ=255) gtgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttctattaatgaaagctcaccc < 1:4378081‑M1/100‑99 (MQ=255) gtgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattgatagaaagcgaacgg > 2:4341556‑M1/1‑2 (MQ=255) gtgtcctgggcctctagacgaaggggacacgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacag > 2:3230317‑M1/1‑2 (MQ=255) | ACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGA > NC_000913/3943380‑3943577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |