New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4235376 =NA (NA)10 (0.070) 5/156 NT NA coding (1619/1650 nt) pgi glucosephosphate isomerase
?NC_000913 4235411 = NA (NA)intergenic (+4/‑495) pgi/yjbE glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein

Only 100 of 263 total aligned reads displayed.

AGTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC  >  NC_000913/4235277‑4235475
                                                                                                   |                                                                                                   
 ggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatg                                                                                                    >  1:3627932‑M1/99‑100 (MQ=255)
 gTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTg                                                                                                    >  1:1594386/1‑100 (MQ=255)
   ggggCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAACAGCCACGATAGCTCGACCAATGGTCTGAt                                                                                                  >  1:1076418/1‑100 (MQ=255)
    atcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgatgat                                                                                                  >  1:4351284‑M1/96‑99 (MQ=255)
     tcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTa                                                                                                >  1:3416612‑M1/95‑100 (MQ=255)
      cgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTaa                                                                                               >  1:210716‑M1/94‑100 (MQ=255)
       gacctgtaggcctgataagacgcgactgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAAc                                                                                              <  2:1401776‑M1/8‑1 (MQ=255)
       cGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAAc                                                                                              <  1:189290/100‑1 (MQ=255)
         cctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacagatcgacgaTGATTAACCg                                                                                            <  1:2147462‑M1/10‑1 (MQ=255)
          ggAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATGAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGc                                                                                           >  1:2226336/1‑100 (MQ=255)
          ggAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGc                                                                                           <  2:3780616/100‑1 (MQ=255)
          gaaaCTGAATAAACAGCTGGCGAACCTTATTCTGCCAGTGCTGAAAGATGATAAAGAAATCAACAGCCACGATAGCTCGACCAATGGTCTGATTa                                                                                                <  1:3433041/93‑1 (MQ=255)
           gAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCt                                                                                          >  1:770757/1‑100 (MQ=255)
            aaCTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCta                                                                                         >  1:3214403/1‑100 (MQ=255)
            aaCTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCta                                                                                         >  2:730417/1‑100 (MQ=255)
             aCTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCtat                                                                                        >  2:2859571/1‑100 (MQ=255)
             aCTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCtat                                                                                        >  2:510129/1‑100 (MQ=255)
                gggTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATaaa                                                                                     >  2:780289/1‑100 (MQ=255)
                   tAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCg                                                                                  >  1:1220145/1‑100 (MQ=255)
                      aCAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTgg                                                                               <  1:3004705/100‑1 (MQ=255)
                       cAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGgc                                                                              >  2:944781/1‑100 (MQ=255)
                       cAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGgc                                                                              >  2:4055912/1‑100 (MQ=255)
                       cAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGgc                                                                              <  1:2600920/100‑1 (MQ=255)
                         gCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGgcg                                                                             >  1:2069201/1‑99 (MQ=255)
                           tGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCgg                                                                          <  2:2594960/100‑1 (MQ=255)
                            ggCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGt                                                                         >  2:2656819/1‑100 (MQ=255)
                            ggCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCGCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGt                                                                         <  1:84487/100‑1 (MQ=255)
                             gCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGtt                                                                        <  2:215138/100‑1 (MQ=255)
                              cGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTa                                                                       >  1:2301680/1‑100 (MQ=255)
                               gAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTaa                                                                      <  2:2272272/100‑1 (MQ=255)
                               accgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTaa                                                                      >  2:2831736‑M1/69‑100 (MQ=255)
                                ccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAat                                                                     >  1:936735‑M1/68‑100 (MQ=255)
                                aaCCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAATGCGTGGCGCGGTTAat                                                                     <  1:1183612/100‑1 (MQ=255)
                                  ccGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatca                                                                   >  2:1654136/1‑100 (MQ=255)
                                  ccGTATTCTGCCAGAGCGGAAAGAGGATAAAGAAATCAGCAGCCACGATAGCGCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatca                                                                   <  1:3817196/100‑1 (MQ=255)
                                   cgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcat                                                                  >  2:1050877‑M1/65‑100 (MQ=255)
                                   cGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcat                                                                  >  1:3281710/1‑100 (MQ=255)
                                     tATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCTCGGTTAATCAtcg                                                                <  2:2984181/100‑1 (MQ=255)
                                     tATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcg                                                                <  1:1921087/100‑1 (MQ=255)
                                     tATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcg                                                                <  1:1778835/100‑1 (MQ=255)
                                         cTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATCAAGCGTGGCGCGGTTAATCATCGTCGa                                                            >  1:3031171/1‑100 (MQ=255)
                                          tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGat                                                           <  1:4046800/100‑1 (MQ=255)
                                          tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGat                                                           >  2:845382/1‑100 (MQ=255)
                                          tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGat                                                           <  2:3760236/100‑1 (MQ=255)
                                           gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtcg                                                             >  2:1977687/1‑97 (MQ=255)
                                           gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                          <  1:1463474/100‑1 (MQ=255)
                                            ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat                                                         <  1:1406975/100‑1 (MQ=255)
                                            ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat                                                         >  2:3265019/1‑100 (MQ=255)
                                              agagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGt                                                       <  1:3873307/100‑1 (MQ=255)
                                                 gCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg                                                    >  2:1947951/1‑100 (MQ=255)
                                                  cTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGc                                                   >  2:1131811/1‑100 (MQ=255)
                                                   tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg                                                    >  2:3021018/1‑98 (MQ=255)
                                                   tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGcc                                                  >  1:3662640/1‑100 (MQ=255)
                                                   tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGcc                                                  >  1:566107/1‑100 (MQ=255)
                                                    gAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATGATCGTCGATATGTAGGCCg                                                 >  1:4291279/1‑100 (MQ=255)
                                                    gAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCg                                                 >  2:4214011/1‑100 (MQ=255)
                                                     aaaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg                                                <  2:4253539/100‑1 (MQ=255)
                                                       aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                              >  2:397049/1‑100 (MQ=255)
                                                       aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                              <  2:677068/100‑1 (MQ=255)
                                                        gatgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATa                                             >  2:3117028/1‑100 (MQ=255)
                                                         atgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATaa                                            <  2:2670746/100‑1 (MQ=255)
                                                          tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAg                                           >  2:1169254/1‑100 (MQ=255)
                                                           gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                          <  2:1907085/100‑1 (MQ=255)
                                                            atAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGc                                         >  1:1345476/1‑100 (MQ=255)
                                                             tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTATGCCGGATAAGGc                                         >  2:3886674/1‑99 (MQ=255)
                                                              aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAGCCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                       <  1:2805036/100‑1 (MQ=255)
                                                              aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                       >  2:2538879/1‑100 (MQ=255)
                                                               aaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                      >  2:2233801/1‑100 (MQ=255)
                                                                aGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAGAAGGCGTTc                                     >  1:3074230/1‑100 (MQ=255)
                                                                 gAAAGCAGCAGCCACGATAGTTCGTCCATTGGTCTGATTAACCGCTATAAAGTGTGGCGCGTTTAATTATCGTCTATATGTAGGCCTGATAAGGCg                                        <  1:2378519/96‑1 (MQ=255)
                                                                  aaaTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCa                                    >  1:1001658/1‑99 (MQ=255)
                                                                   aaTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcg                                  >  2:11855/1‑100 (MQ=255)
                                                                    aTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc                                 >  1:3728519/1‑100 (MQ=255)
                                                                     tCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgcc                                <  1:2206462/100‑1 (MQ=255)
                                                                      cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg                               >  1:1988209/1‑100 (MQ=255)
                                                                      cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg                               <  1:16277/100‑1 (MQ=255)
                                                                      cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg                               <  1:1654131/100‑1 (MQ=255)
                                                                            ccACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                         >  2:792432/1‑100 (MQ=255)
                                                                             cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                        >  2:175798/1‑100 (MQ=255)
                                                                             cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                        <  1:397048/100‑1 (MQ=255)
                                                                                gATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                     >  2:4158406/1‑100 (MQ=255)
                                                                                 aTAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc                    >  1:714020/1‑100 (MQ=255)
                                                                                  tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                   <  1:4158377/100‑1 (MQ=255)
                                                                                  tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                   <  1:18051/100‑1 (MQ=255)
                                                                                    gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                 <  2:710420/100‑1 (MQ=255)
                                                                                    gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGGTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                 >  1:3804525/1‑100 (MQ=255)
                                                                                       cGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg               <  1:3947369/99‑1 (MQ=255)
                                                                                        gACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc             >  2:4350506/1‑100 (MQ=255)
                                                                                            aaTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAt         >  2:1096567/1‑100 (MQ=255)
                                                                                              tGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGa          >  2:3490650/1‑97 (MQ=255)
                                                                                              tGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGc       <  2:1507494/100‑1 (MQ=255)
                                                                                               ggTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCg      >  2:2437612/1‑100 (MQ=255)
                                                                                               ggTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCg      >  1:475285/1‑100 (MQ=255)
                                                                                                gTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa     >  2:2718829/1‑100 (MQ=255)
                                                                                                 ttTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc    >  1:2671060‑M1/3‑100 (MQ=255)
                                                                                                 tCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc    >  1:796938/1‑100 (MQ=255)
                                                                                                 tCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc    >  2:3545882/1‑100 (MQ=255)
                                                                                                  cTGCTTAACCGCTATAACGCGTGGCGCGGTTAATCAACATCAATACCTAGACAGGATGAGGCGATCAAGAAGAATCCGGCAACCGATCCATGAAGCg      >  1:1614300/1‑97 (MQ=255)
                                                                                                  cTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg   >  2:1274317/1‑100 (MQ=255)
                                                                                                   TGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgc  <  1:1864085‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AGTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC  >  NC_000913/4235277‑4235475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.