BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4235376 =	NA (NA)	10 (0.070)	5/156	NT	NA	coding (1619/1650 nt)	pgi	glucosephosphate isomerase
*	?	NC_000913	4235411 =	NA (NA)	10 (0.070)	5/156	NT	NA	intergenic (+4/‑495)	pgi/yjbE	glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein

Only 100 of 242 total aligned reads displayed.

CGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGA  >  NC_000913/4235312‑4235510

cgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcat                                                                                                     >  1:1343470‑M1/65‑100 (MQ=255)

cgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcat                                                                                                     >  2:1050877‑M1/65‑100 (MQ=255)

cGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcat                                                                                                     >  2:2380695/1‑100 (MQ=255)

 gTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc                                                                                                    >  2:3773945/1‑100 (MQ=255)

  tATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc                                                                                                    >  1:3773772/1‑99 (MQ=255)

     tCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtcg                                                                                                <  2:3214420/100‑1 (MQ=255)

       tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGat                                                                                              >  2:845382/1‑100 (MQ=255)

       tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGat                                                                                              <  1:4046800/100‑1 (MQ=255)

         ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGCTAGCTCGACCAATGGTCTGATTACCCGCTATACAGCGTGGCGAGGTTAATCATCGTCGatat                                                                                            >  1:3457509/1‑100 (MQ=255)

         ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat                                                                                            <  1:1406975/100‑1 (MQ=255)

          cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATg                                                                                           >  2:4220926/1‑100 (MQ=255)

          cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGGTAATCATCGTCGATATg                                                                                           >  1:512242/1‑100 (MQ=255)

           agagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGt                                                                                          <  1:3873307/100‑1 (MQ=255)

            gagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTa                                                                                         <  1:4232748/100‑1 (MQ=255)

              gCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg                                                                                       >  2:1947951/1‑100 (MQ=255)

                tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGcc                                                                                     <  2:2989788/100‑1 (MQ=255)

                tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGc                                                                                      >  1:2604457/1‑99 (MQ=255)

                  aaaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg                                                                                   <  2:416455/100‑1 (MQ=255)

                    aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                                                                 <  1:2208330/100‑1 (MQ=255)

                     gatgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATa                                                                                >  2:3699487/1‑100 (MQ=255)

                     gatgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATa                                                                                >  2:3117028/1‑100 (MQ=255)

                      atgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATaa                                                                               <  2:2670746/100‑1 (MQ=255)

                       tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAg                                                                              >  2:1169254/1‑100 (MQ=255)

                        gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                                                             <  2:1907085/100‑1 (MQ=255)

                        gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                                                             >  2:2197792/1‑100 (MQ=255)

                        gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                                                             >  2:2827868/1‑100 (MQ=255)

                         atAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGc                                                                            >  1:1345476/1‑100 (MQ=255)

                          tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTATGCCGGATAAGGc                                                                            >  2:3886674/1‑99 (MQ=255)

                          tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           >  1:1128327/1‑100 (MQ=255)

                          tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           <  1:2378480/100‑1 (MQ=255)

                           aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAGCCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                                                          <  1:2805036/100‑1 (MQ=255)

                           aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                                                          >  2:2538879/1‑100 (MQ=255)

                           aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                                                          >  2:2666174/1‑100 (MQ=255)

                            aaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                                                         >  2:2233801/1‑100 (MQ=255)

                               aaaTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCa                                                                       >  1:1001658/1‑99 (MQ=255)

                                aaTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcg                                                                     >  2:11855/1‑100 (MQ=255)

                                aaTCAGCAGCCACAATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcg                                                                     >  1:1839385/1‑100 (MQ=255)

                                 aTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc                                                                    >  1:3728519/1‑100 (MQ=255)

                                 aTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc                                                                    >  1:778537/1‑100 (MQ=255)

                                   cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg                                                                  <  1:16277/100‑1 (MQ=255)

                                   cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg                                                                  <  1:1654131/100‑1 (MQ=255)

                                    agcagcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccgc                                                                 >  2:3594018/1‑100 (MQ=255)

                                        gcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                             <  1:2082018/100‑1 (MQ=255)

                                              aTAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc                                                       >  1:714020/1‑100 (MQ=255)

                                               tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                                                      <  1:4158377/100‑1 (MQ=255)

                                               tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                                                      <  1:18051/100‑1 (MQ=255)

                                                 gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCg                                                     >  1:3982408/1‑99 (MQ=255)

                                                 gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGGTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                                                    >  1:3804525/1‑100 (MQ=255)

                                                  cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt                                                   >  1:4090310/1‑100 (MQ=255)

                                                  cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCAGGGTGAGGCGTTCACGCCGCATCCGGCaaac                                                      >  1:3933101/1‑95 (MQ=38)

                                                    cGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                 >  2:71776/1‑100 (MQ=255)

                                                    cGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                 >  1:3256574/1‑100 (MQ=255)

                                                    cGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAAGCCGGATACGGCCATCACGCCGCATCCGGCAACCGATGc                                                 >  1:3051914/1‑100 (MQ=39)

                                                     gACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc                                                <  1:2897429/100‑1 (MQ=255)

                                                     gACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc                                                >  2:4350506/1‑100 (MQ=255)

                                                       ccAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTg                                              <  2:786289/100‑1 (MQ=255)

                                                       ccAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCAGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTg                                              <  2:39687/100‑1 (MQ=255)

                                                            ggTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCg                                         >  1:475285/1‑100 (MQ=255)

                                                            ggTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCg                                         >  2:2437612/1‑100 (MQ=255)

                                                              ttTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc                                       >  1:2671060‑M1/3‑100 (MQ=255)

                                                              tCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc                                       <  1:1933790/100‑1 (MQ=255)

                                                               cTGCTTAACCGCTATAACGCGTGGCGCGGTTAATCAACATCAATACCTAGACAGGATGAGGCGATCAAGAAGAATCCGGCAACCGATCCATGAAGCg                                         >  1:1614300/1‑97 (MQ=255)

                                                               atgattaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg                                      >  1:2261339‑M2/37‑100 (MQ=255)

                                                                TGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgc                                     >  2:2833246‑M1/1‑100 (MQ=255)

                                                                TGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgc                                     <  1:1864085‑M1/100‑1 (MQ=255)

                                                                  attaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                   >  2:2107516‑M2/34‑100 (MQ=255)

                                                                  ATTAACCGCTATAAAGCGTGGAGCGGTTCATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                   >  1:3416572‑M1/1‑100 (MQ=255)

                                                                   ttaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGt                                  >  1:192318‑M2/33‑100 (MQ=255)

                                                                    TAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCTTCCGGCAACCGATGCCTTATGCGACGCGGTc                                 >  2:2965775‑M1/1‑100 (MQ=255)

                                                                     aaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                                >  2:2688269‑M2/31‑100 (MQ=255)

                                                                     AACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                                >  1:2384736‑M1/1‑100 (MQ=255)

                                                                       CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                              >  2:4334316‑M1/1‑100 (MQ=255)

                                                                          CTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCt                           >  2:1576273‑M1/1‑100 (MQ=255)

                                                                            ataAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTa                         >  2:3423978/1‑100 (MQ=255)

                                                                              aaaGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                       <  2:4053056/100‑1 (MQ=255)

                                                                                aGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg                     >  2:3183124/1‑100 (MQ=255)

                                                                                aGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg                     <  2:1998875/100‑1 (MQ=255)

                                                                                 gCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAgg                    <  2:3388709/100‑1 (MQ=255)

                                                                                  cGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAgg                    <  1:1718638/99‑1 (MQ=255)

                                                                                  cGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc                   <  1:3117011/100‑1 (MQ=255)

                                                                                   gTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGcc                  <  1:2197784/100‑1 (MQ=255)

                                                                                    tGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcat                 <  2:1282569/100‑3 (MQ=21)

                                                                                    tGGCGCGGTTAATCATCGGCGAGATGTAGGCCGGATAAGGGGTTCACGCGGCATCCGGCAACCGATGACTGATGCGACGCGGTCGCGTCTTATCAGGcc                  >  1:2060303/1‑99 (MQ=18)

                                                                                     ggCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatc                <  2:1681731/100‑4 (MQ=21)

                                                                                      gcgcGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc               >  2:1969315/1‑100 (MQ=255)

                                                                                      gcgcGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatc                <  1:869550/99‑4 (MQ=21)

                                                                                       cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa              <  1:2421343/100‑1 (MQ=255)

                                                                                       cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatcgg              <  2:697695/100‑6 (MQ=18)

                                                                                       cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatcgg              <  2:1625959/100‑6 (MQ=21)

                                                                                         cggttaatcaTCGTCGATCTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAgg            <  1:2147462‑M2/90‑1 (MQ=255)

                                                                                         cgGTGAATCATCGCCGGTAGGGAGCCGGCATAAGACGTTACCGCCGCATCCGGCATCAGGTGCCTGCTCCAACGCGGTCGAGTCTTATCAGCCCTAc               <  1:1352680/97‑1 (MQ=9)

                                                                                          ggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt           <  2:2511803‑M2/91‑1 (MQ=255)

                                                                                           gttagtcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTc          <  1:1473401‑M2/92‑1 (MQ=255)

                                                                                           gttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTc          >  2:1085425‑M2/9‑100 (MQ=255)

                                                                                           gttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCAGTCGCGTCTTATCAGGCCTACAGGTc          <  2:1401776‑M2/92‑1 (MQ=255)

                                                                                           gTTAATCAGCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatcggttgc          <  2:1148178/100‑10 (MQ=17)

                                                                                            ttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCg         >  1:210716‑M2/8‑100 (MQ=255)

                                                                                                tcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc     >  2:1102568‑M2/4‑100 (MQ=255)

                                                                                                 caTCGTCGATATGTAGGCCGGATGAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGcc    >  1:954049‑M2/3‑100 (MQ=255)

                                                                                                   tcgtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGa  >  1:1196583/1‑100 (MQ=255)

CGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGA  >  NC_000913/4235312‑4235510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.