BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4638329	170 (1.080)	9 (0.060)	5/168	NT	5.2%	coding (152/1353 nt)	creD	inner membrane protein
*	?	NC_000913	= 4638348	166 (1.110)	9 (0.060)	5/168	NT	5.2%	coding (171/1353 nt)	creD	inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 233 total aligned reads displayed.

TGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAT  >  NC_000913/4638230‑4638428

tGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGG                                                                                                     >  1:3351973‑M1/1‑100 (MQ=255)

 gCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCggg                                                                                                    >  2:3317820/1‑100 (MQ=255)

 gCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCggg                                                                                                    <  1:3162187/100‑1 (MQ=255)

 gCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCggg                                                                                                    <  2:751400/100‑1 (MQ=255)

    gttgttGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCg                                                                                                 >  2:1434349/1‑100 (MQ=255)

     ttgttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGc                                                                                                <  2:2104851/100‑1 (MQ=255)

      tgttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTCCCAGCGGGCCGCa                                                                                               <  2:2129534/100‑1 (MQ=255)

       nttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaa                                                                                              >  2:3750685/2‑100 (MQ=255)

         tgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaa                                                                                            >  1:4057482/1‑100 (MQ=255)

          gATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaaa                                                                                           <  2:2737908/100‑1 (MQ=255)

          gATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaaa                                                                                           >  1:3414232/1‑100 (MQ=255)

          gATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaa                                                                                            >  1:402999/1‑99 (MQ=255)

          gATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTAGAAAATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaaa                                                                                           >  2:3769246/1‑100 (MQ=255)

           aTTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAAc                                                                                          <  2:3680101/100‑1 (MQ=255)

            ttCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACt                                                                                         >  2:4208816/1‑100 (MQ=255)

             tCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTc                                                                                        >  1:1989394/1‑100 (MQ=255)

             tCCGATAATGCTGATTCGGCAGGTGAATGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTc                                                                                        >  2:2676332/1‑100 (MQ=255)

               cGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGt                                                                                      <  1:2088089/100‑1 (MQ=255)

               cGACAATGCTGATACGGCAGGTTAATGACGAACGAGCTGATTACCGAAGCGCTGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAAATCg                                                                                       >  1:1219929/1‑99 (MQ=255)

                gATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGtt                                                                                     >  2:728836/1‑100 (MQ=255)

                 aTAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTg                                                                                    <  2:1567902/100‑1 (MQ=255)

                 aTAATGCTGATTCGGCAGGTGATTGTCGAACGGGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTg                                                                                    <  2:1517598/100‑1 (MQ=255)

                     tGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGcc                                                                                >  2:1576585‑M2/1‑98 (MQ=255)

                      gCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccg                                                                               <  1:634750‑M2/100‑4 (MQ=255)

                       cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                              <  2:3840404‑M2/100‑5 (MQ=255)

                       cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                              <  2:143819‑M2/100‑5 (MQ=255)

                        tGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgct                                                                             <  1:3217516‑M1/100‑25 (MQ=255)

                        tGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgct                                                                             >  1:3014132‑M2/1‑95 (MQ=255)

                         gagtctgCATGTGATTGGCGCACGTCCTCCTTACCCTAACGATGTGGAAGCTGCGATTCTCCAAGTTACCAGCGCGCCGCAAAAACTCGTTAGGCCGCTc                                                                            <  1:627970/94‑1 (MQ=255)

                          aTTCGGCAGGTGATTGTCTAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctg                                                                            <  1:320369‑M1/99‑26 (MQ=255)

                          aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGTAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctgg                                                                           <  1:1932316‑M1/100‑27 (MQ=255)

                          aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctgg                                                                           <  2:1406525‑M1/100‑27 (MQ=255)

                             cGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                        <  1:3126790/100‑1 (MQ=255)

                              ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                       >  2:1430191/1‑100 (MQ=255)

                              ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCAGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                       >  1:1360163/1‑100 (MQ=255)

                                    tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                 <  2:3426956/100‑1 (MQ=255)

                                    tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                 >  1:1673089/1‑100 (MQ=255)

                                       ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgt                                                              <  2:4300386/100‑1 (MQ=255)

                                       ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTAGTCCtg                                                               <  1:930778/99‑1 (MQ=255)

                                         gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                            >  2:1179645/1‑100 (MQ=255)

                                         gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                            >  1:428855/1‑100 (MQ=255)

                                         gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                            >  2:2827749/1‑100 (MQ=255)

                                           cGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAcc                                                          <  2:483142/100‑1 (MQ=255)

                                             aaCGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                        <  1:1011411/100‑1 (MQ=255)

                                             aaCGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                        <  1:3503660/100‑1 (MQ=255)

                                               cGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGc                                                      <  1:1779360/100‑1 (MQ=255)

                                                gTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCt                                                     <  1:787781/100‑1 (MQ=255)

                                                gTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCt                                                     >  2:165561/1‑100 (MQ=255)

                                                 tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGCGCtt                                                    >  1:827165/1‑100 (MQ=255)

                                                 tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                    >  1:1814532/1‑100 (MQ=255)

                                                 tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                    >  1:1587318/1‑100 (MQ=255)

                                                  gCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCttt                                                   <  2:2222558/100‑1 (MQ=255)

                                                  gCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCttt                                                   <  2:4247017/100‑1 (MQ=255)

                                                   cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                  >  2:2448881/1‑100 (MQ=255)

                                                    tGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtat                                                 >  2:817785/1‑100 (MQ=255)

                                                     gagtagggTAGGGAGGTGGAAGATGGGATTCGGCAGAGGACGGGCGGGCCGCAAAAGCGCGTTGGGCCGCTGATCGGGATTCCTGTGACCGAGCGTta                                                  <  1:2414335/91‑1 (MQ=255)

                                                     gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                >  1:1163985/1‑100 (MQ=255)

                                                     gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACAAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                >  1:2585852/1‑100 (MQ=255)

                                                      aTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                               <  1:3942242/100‑1 (MQ=255)

                                                      aTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                               <  2:1849903/100‑1 (MQ=255)

                                                        tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACTGAGCTTTATACgg                                             <  2:2957581/100‑1 (MQ=255)

                                                        tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACgg                                             <  2:299784/100‑1 (MQ=255)

                                                         aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCACCGGACCGCAATAAATCTTAGGACCACTCATCCATAGTCCTGTAACAGCGCtttgaaccg                                             >  1:3670994/1‑93 (MQ=255)

                                                            gTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCa                                         >  2:4312450/1‑100 (MQ=255)

                                                            gTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCAGCAAAAACTCGTTGAGACGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTTCa                                         >  1:3712069/1‑100 (MQ=255)

                                                             tAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAg                                        <  2:338506/100‑1 (MQ=255)

                                                                 gATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAag                                    >  2:3208171/1‑100 (MQ=255)

                                                                    gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                 >  2:3078732/1‑100 (MQ=255)

                                                                    gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                 >  1:3756545/1‑100 (MQ=255)

                                                                    gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                 <  2:1082014/100‑1 (MQ=255)

                                                                     tgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGa                                >  1:2671631/1‑100 (MQ=255)

                                                                      ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                               >  2:2495709/1‑100 (MQ=255)

                                                                       gAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATa                              >  2:3042481/1‑100 (MQ=255)

                                                                          gATGCGATTCGCCAAAGTACCAGCGAGCAGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaaaa                           <  1:3528705/100‑1 (MQ=255)

                                                                           aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                          >  1:474550/1‑100 (MQ=255)

                                                                            tGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaaagat                         >  1:1112495/1‑97 (MQ=255)

                                                                            tGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAcc                         >  2:585643/1‑100 (MQ=255)

                                                                              cGATTCGCCAAAGTACCAGCGGGCCGCAACAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGt                       >  1:2777565/1‑100 (MQ=255)

                                                                               gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                      >  1:1846165/1‑100 (MQ=255)

                                                                               gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                      >  2:1253858/1‑100 (MQ=255)

                                                                                aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                     <  1:3071423/100‑1 (MQ=255)

                                                                                   cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAg                   >  2:1904391/1‑99 (MQ=255)

                                                                                   cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                  >  2:3252910/1‑100 (MQ=255)

                                                                                    gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                 <  2:3465018/100‑1 (MQ=255)

                                                                                    gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                 >  1:2996367/1‑100 (MQ=255)

                                                                                     ccAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCgg                >  2:1705359/1‑100 (MQ=255)

                                                                                         aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc            <  1:533681/100‑1 (MQ=255)

                                                                                         aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc            <  2:180190/100‑1 (MQ=255)

                                                                                            aCCAGCGGGCCGCAACAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtacacagcacgttcgacaatcacctgccgaa         <  1:852604‑M2/100‑74 (MQ=255)

                                                                                            aCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGaa         >  2:1039810/1‑100 (MQ=255)

                                                                                             ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg        <  2:16391/100‑1 (MQ=255)

                                                                                             ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg        >  1:283059/1‑100 (MQ=255)

                                                                                              cAGGGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGt       <  1:2493136/100‑1 (MQ=255)

                                                                                              cAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGCAAACGACGt       >  2:4117866/1‑100 (MQ=255)

                                                                                               aGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatca      <  2:76399‑M2/100‑77 (MQ=255)

                                                                                                gCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCCTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt     >  1:4107162/1‑100 (MQ=255)

                                                                                                  ggcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatcagca   <  2:415812‑M1/100‑99 (MQ=255)

                                                                                                   ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt  >  2:2361644/1‑100 (MQ=255)

                                                                                                   ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt  <  1:4322890/100‑1 (MQ=255)

                                                                                                   gcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatcagcat  >  2:3552711‑M1/1‑1 (MQ=255)

TGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAT  >  NC_000913/4638230‑4638428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.