BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4638329	170 (1.080)	9 (0.060)	5/168	NT	5.2%	coding (152/1353 nt)	creD	inner membrane protein
*	?	NC_000913	= 4638348	166 (1.110)	9 (0.060)	5/168	NT	5.2%	coding (171/1353 nt)	creD	inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 208 total aligned reads displayed.

AATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAG  >  NC_000913/4638249‑4638447

 aTGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGc                                                                                                    >  2:2356831‑M2/1‑99 (MQ=255)

  tGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGcc                                                                                                   >  2:4245162‑M2/1‑98 (MQ=255)

  tGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGcc                                                                                                   <  2:4322921‑M2/100‑3 (MQ=255)

   gCTGAGTCGGCAGGAGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGACGATGCGATTCGCAAAAGTCCCGGCGGGCCGCAACAACACGTTGGGCCg                                                                                                  >  1:374312/1‑100 (MQ=255)

    cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                                                 <  2:3840404‑M2/100‑5 (MQ=255)

      gagtctgCATGTGATTGGCGCACGTCCTCCTTACCCTAACGATGTGGAAGCTGCGATTCTCCAAGTTACCAGCGCGCCGCAAAAACTCGTTAGGCCGCTc                                                                                               <  1:627970/94‑1 (MQ=255)

      gATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTc                                                                                               >  2:1733372/1‑100 (MQ=255)

      gATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTc                                                                                               >  2:490474/1‑100 (MQ=255)

         tCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCAATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATc                                                                                            <  1:2736638/100‑1 (MQ=255)

          cGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                                           <  2:1555812/100‑1 (MQ=255)

           ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                                          >  2:1618227/1‑100 (MQ=255)

           ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                                          <  2:2994145/100‑1 (MQ=255)

             cAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTa                                                                                        <  2:4305772/100‑1 (MQ=255)

             cAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTa                                                                                        >  2:797816/1‑100 (MQ=255)

                gTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTc                                                                                     >  1:2085472/1‑100 (MQ=255)

                 tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                                    <  2:1432813/100‑1 (MQ=255)

                 tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                                    <  2:3426956/100‑1 (MQ=255)

                    tggTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAAAGAGCAGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtg                                                                                  <  1:3563658/97‑1 (MQ=255)

                     tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGCTTCGCCAAAGTACCAGCGAGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                                                <  1:2881178/100‑1 (MQ=255)

                     tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                                                <  2:3050775/100‑1 (MQ=255)

                      gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGTGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                                               >  2:3516620/1‑100 (MQ=255)

                      gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                                               >  2:1179645/1‑100 (MQ=255)

                          aaCGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                                           <  1:3503660/100‑1 (MQ=255)

                          aaCGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                                           <  1:1011411/100‑1 (MQ=255)

                            cGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAAGTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGc                                                                         <  1:780261/100‑1 (MQ=255)

                            cGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGc                                                                         <  1:4320182/100‑1 (MQ=255)

                            cGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGc                                                                         <  1:1779360/100‑1 (MQ=255)

                             gTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCt                                                                        >  2:165561/1‑100 (MQ=255)

                              tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       >  1:1814412/1‑100 (MQ=255)

                              tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       >  2:1507368/1‑100 (MQ=255)

                              tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       >  1:1587318/1‑100 (MQ=255)

                                  gagtagggTAGGGAGGTGGAAGATGGGATTCGGCAGAGGACGGGCGGGCCGCAAAAGCGCGTTGGGCCGCTGATCGGGATTCCTGTGACCGAGCGTta                                                                     <  1:2414335/91‑1 (MQ=255)

                                  gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTTACCGAGCTTtata                                                                   >  2:327945/1‑100 (MQ=255)

                                  gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                                   >  1:1163985/1‑100 (MQ=255)

                                  gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                                   >  1:800638/1‑100 (MQ=255)

                                  gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGACGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                                   >  1:1849897/1‑100 (MQ=255)

                                     tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACgg                                                                >  1:3467578/1‑100 (MQ=255)

                                     tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACgg                                                                <  2:3954917/100‑1 (MQ=255)

                                      aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                                               <  2:2883165/100‑1 (MQ=255)

                                      aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCACCGGACCGCAATAAATCTTAGGACCACTCATCCATAGTCCTGTAACAGCGCtttgaaccg                                                                >  1:3670994/1‑93 (MQ=255)

                                       ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                                               >  1:1711432/1‑99 (MQ=255)

                                       ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                                              <  2:2589495/100‑1 (MQ=255)

                                        cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                                             >  2:1021363/1‑100 (MQ=255)

                                          tAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAg                                                           <  2:338506/100‑1 (MQ=255)

                                            gggATGTGGAGGATGCGATTCGCCAAGGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCGCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                                         <  1:317909/98‑1 (MQ=255)

                                              gATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAag                                                       >  2:3208171/1‑100 (MQ=255)

                                              gATATGGATAATGCATTTCGCCAAATTATCAGCGGGCTGTAAAAACTCGTTGCGCCGCTTATCTCTATTCTTGTGACCGAGCTTTATACgg                                                                <  1:1835222/91‑1 (MQ=255)

                                                 gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    <  1:2586938/100‑1 (MQ=255)

                                                   ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                                                  >  2:2414389/1‑100 (MQ=255)

                                                   ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                                                  >  2:2495387/1‑100 (MQ=255)

                                                   ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCCATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                                                  >  2:734664/1‑100 (MQ=255)

                                                    gAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATa                                                 >  2:3023219/1‑100 (MQ=255)

                                                     atcttGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaa                                                <  2:1112499/96‑1 (MQ=255)

                                                            gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                         >  2:1253858/1‑100 (MQ=255)

                                                             aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                                        >  1:369550/1‑100 (MQ=255)

                                                             aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                                        <  1:3071423/100‑1 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     >  2:3252910/1‑100 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     <  2:1972994/100‑1 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     >  1:1358270/1‑100 (MQ=255)

                                                                 gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                    >  1:2996367/1‑100 (MQ=255)

                                                                 gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                    <  2:3347068/100‑1 (MQ=255)

                                                                  ccAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCgg                                   <  2:4286545/100‑1 (MQ=255)

                                                                   cAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGa                                  >  1:3515636/1‑100 (MQ=255)

                                                                    aaaGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGaa                                 <  2:1809194/100‑1 (MQ=255)

                                                                      aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc                               <  1:533681/100‑1 (MQ=255)

                                                                         aCCAGCGGGCCGCAACAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtacacagcacgttcgacaatcacctgccgaa                            <  1:852604‑M2/100‑74 (MQ=255)

                                                                         aCCAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaa                            <  1:3978318‑M2/100‑74 (MQ=255)

                                                                          ccAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaat                           <  2:1406525‑M2/100‑75 (MQ=255)

                                                                          ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg                           <  2:16391/100‑1 (MQ=255)

                                                                           cAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatc                          <  2:3683124‑M2/100‑76 (MQ=255)

                                                                           cAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGCAAACGACGt                          >  2:4117866/1‑100 (MQ=255)

                                                                            aGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatca                         <  1:3217516‑M2/100‑77 (MQ=255)

                                                                             gCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt                        <  2:2204725/100‑1 (MQ=255)

                                                                             gCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCCTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt                        >  1:4107162/1‑100 (MQ=255)

                                                                                ggCCGCAAAAACTGGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTGCACGGTGCAGGCAGAGGATAAAACCGTGGAGCGGAAAAGAAGttttgt                     >  1:25831/1‑98 (MQ=255)

                                                                                ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                     <  1:2783631/100‑1 (MQ=255)

                                                                                 gCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAtn                    <  1:1098859/100‑2 (MQ=255)

                                                                                  ccGCAAAAGGTCGTTGGGCCGCTCATGGCTGTGTCTGTGAGCGAGCATTAGACTGTGCAGGAAGAGGATAAACCCGTGGAGCGGAAACGACGTTTTAt                     <  1:1136567/98‑1 (MQ=255)

                                                                                  ccGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                   >  1:464631/1‑100 (MQ=255)

                                                                                    gCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCa                  >  1:2810570/1‑99 (MQ=255)

                                                                                    gCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAt                 >  1:2621563/1‑100 (MQ=255)

                                                                                     cAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtt                >  2:2822336/1‑100 (MQ=255)

                                                                                     cAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtt                >  1:867287/1‑100 (MQ=255)

                                                                                        aaaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAttttt             >  2:1895850/1‑100 (MQ=255)

                                                                                        aaaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAttttt             <  2:1781833/100‑1 (MQ=255)

                                                                                         aaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTg            <  1:3869735/100‑1 (MQ=255)

                                                                                         aaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTg            <  1:219894/100‑1 (MQ=255)

                                                                                          aCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  2:3449711/100‑1 (MQ=255)

                                                                                           cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGt          >  1:489156/1‑100 (MQ=255)

                                                                                           cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGt          <  1:444998/100‑1 (MQ=255)

                                                                                           cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGt          <  1:3792516/100‑1 (MQ=255)

                                                                                           cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGt          >  1:192111/1‑100 (MQ=255)

                                                                                             cGTTGGGCCGCTCATCGCTATTTCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACAGTGGAGCGGAAACGAAGTTTTATCCATTTTTCGTTa        >  2:2900466/1‑100 (MQ=255)

                                                                                             cGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTa        <  1:143818/100‑1 (MQ=255)

                                                                                               ttGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAcc      <  2:3595643/100‑1 (MQ=255)

                                                                                                tGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCt     >  2:1054819/1‑100 (MQ=255)

                                                                                                 gggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg    >  2:590706/1‑100 (MQ=255)

                                                                                                 gggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg    <  2:635392/100‑1 (MQ=255)

                                                                                                  ggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGa   >  1:950215/1‑100 (MQ=255)

                                                                                                   gCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg  >  2:215084/1‑100 (MQ=255)

AATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAG  >  NC_000913/4638249‑4638447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.