BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 39200	NA (NA)	11 (0.080)	7/164	NT	NA	noncoding (50/82 nt)	REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 39232	NA (NA)	11 (0.080)	7/164	NT	NA	noncoding (82/82 nt)	REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 208 total aligned reads displayed.

GGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAG  >  NC_000913/39102‑39299

ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGg                                                                                                    >  1:782753‑M1/1‑99 (MQ=255)

ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGg                                                                                                    <  2:1132416‑M1/100‑2 (MQ=255)

 gTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTCTCCGGCCTACATTCGTGCTCCCGTAGgc                                                                                                   >  1:258082‑M1/1‑98 (MQ=255)

  tAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcc                                                                                                  <  2:4082647‑M1/100‑4 (MQ=255)

  tAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcc                                                                                                  <  2:338321‑M1/100‑4 (MQ=255)

  tAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcc                                                                                                  >  1:1980528‑M1/1‑97 (MQ=255)

   aGATGATGCAGTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTAGCCGGCTTACATTCGTGCTCCCGTAGg                                                                                                    <  1:1286341‑M1/97‑2 (MQ=255)

   aGATGATCCATTATTTGCTCCTGAAAAATTGATGTAGCACATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcct                                                                                                 <  1:1662091‑M1/100‑5 (MQ=255)

    gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcctg                                                                                                >  1:3870934‑M1/1‑95 (MQ=255)

    gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcctg                                                                                                <  1:3637033‑M1/100‑6 (MQ=255)

    gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcctg                                                                                                >  2:590740‑M1/1‑95 (MQ=255)

      tgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcctgat                                                                                              <  1:2514503‑M1/100‑8 (MQ=255)

       gatTCATTATTTGCTGCTGAAAAATTTATGTAGTGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa                                                                                             <  1:1164609/100‑1 (MQ=255)

       gatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa                                                                                             <  1:4359171/100‑1 (MQ=255)

       gatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa                                                                                             <  1:3177125/100‑1 (MQ=255)

        atCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATaa                                                                                            >  2:1487978/1‑100 (MQ=255)

         tCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAg                                                                                           >  2:4197591/1‑100 (MQ=255)

          ccATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGa                                                                                          >  1:1420459/1‑100 (MQ=255)

           cATTATTTGCTCCTGAAAAATTTATGTAGCGCATTACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGAc                                                                                         <  1:2314466/100‑1 (MQ=255)

           cATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGAc                                                                                         >  1:3016107/1‑100 (MQ=255)

            attattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACg                                                                                        >  1:3896556/1‑100 (MQ=255)

            attattTGCTCCTGAAAAATTTATGTAGCGCATGACGTCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACg                                                                                        <  2:3287950/100‑1 (MQ=255)

             ttattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGc                                                                                       <  2:3010052/100‑1 (MQ=255)

               attTGCTCCTGAAAAATTTATGTAGCGCCTGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCATGCTCCCGTAGGCCTGATAAGACGCAt                                                                                     >  1:3759139/1‑100 (MQ=255)

                 ttGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCa                                                                                   <  1:3373520/100‑1 (MQ=255)

                      ccTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTc                                                                              <  2:562866/100‑1 (MQ=255)

                       cTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTc                                                                              <  1:1515006/99‑1 (MQ=255)

                       cTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGATCCCATAGGCCTGATAAGACGCATCAGCGTCg                                                                             <  2:4176215/100‑1 (MQ=255)

                        tGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGc                                                                            >  2:1044140/1‑100 (MQ=255)

                         gAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCA                                                                           <  1:4168254‑M2/100‑1 (MQ=255)

                         gAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCA                                                                           >  2:2765053‑M2/1‑100 (MQ=255)

                          aaaaaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCAT                                                                          <  1:741842‑M2/100‑1 (MQ=255)

                            aaaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcctgatgcgacgctgatgcgtcttatca                                                                        <  1:4078623‑M1/100‑30 (MQ=255)

                            aaaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCA                                                                        >  1:3253102‑M2/1‑100 (MQ=255)

                             aaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcctgatgcgacgctgatgcgtcttatcag                                                                       <  2:3210070‑M1/100‑31 (MQ=255)

                             aaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcctgataagacgctgatgcgtcttatcag                                                                       <  2:2622370‑M1/100‑31 (MQ=255)

                              aTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGG                                                                      >  2:2172580‑M2/1‑100 (MQ=255)

                              aTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGG                                                                      >  1:4300314‑M2/1‑100 (MQ=255)

                               tttATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGC                                                                     <  2:2013598‑M2/100‑1 (MQ=255)

                               tttATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGC                                                                     <  1:1360677‑M2/100‑1 (MQ=255)

                               tttATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCATGCTCCCGTAGgcctgatgcgacgctgatgcgtcttatcaggc                                                                     <  2:3717849‑M1/100‑33 (MQ=255)

                                ttATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGgcctgatgcgacgctgatgcgtcttatcaggcc                                                                    <  1:966366‑M1/100‑34 (MQ=255)

                                  aTGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgc                                                                  <  1:535472/100‑1 (MQ=255)

                                    gTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCTTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgc                                                                >  1:4188516/1‑100 (MQ=255)

                                      aGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgccc                                                              >  1:3356306/1‑98 (MQ=255)

                                      aGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCAc                                                              >  2:1815266/1‑100 (MQ=255)

                                      aGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCAc                                                              >  2:2911097/1‑100 (MQ=255)

                                       gcgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGaagagcac                                                              <  2:1461322‑M2/99‑9 (MQ=255)

                                       gcgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCCTAGGCCTCATAACACGCATCAGCGACGCATCAGGC                                                                     <  1:3670855‑M2/92‑1 (MQ=255)

                                        cgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGACCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACgg                                                            <  1:4003135/100‑1 (MQ=255)

                                            tGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACtt                                                        >  1:4324745/1‑100 (MQ=255)

                                             gACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTa                                                       >  2:1333962/1‑100 (MQ=255)

                                                 gCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg                                                   <  1:3142711/100‑1 (MQ=255)

                                                  ccGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGt                                                  <  2:2082313/100‑1 (MQ=255)

                                                    ggATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTAt                                                <  1:109590/100‑1 (MQ=255)

                                                     gATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTAtt                                               <  1:2958643/100‑1 (MQ=255)

                                                      aTGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTg                                              <  1:822507/100‑1 (MQ=255)

                                                       tGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGc                                             <  2:384420/100‑1 (MQ=255)

                                                        gcggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCt                                            <  1:139129/100‑1 (MQ=255)

                                                         cggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCtt                                           >  2:4267923/1‑100 (MQ=255)

                                                          ggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTc                                          <  2:1075062/100‑1 (MQ=255)

                                                          ggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTc                                          >  1:209643/1‑100 (MQ=255)

                                                           gcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa                                         <  2:3029721/100‑1 (MQ=255)

                                                            cgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAg                                        <  2:3373409/100‑1 (MQ=255)

                                                            cgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAg                                        >  2:2819655/1‑100 (MQ=255)

                                                            cgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAg                                        <  2:3798951/100‑1 (MQ=255)

                                                                aaCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAcc                                    >  2:3995367/1‑100 (MQ=255)

                                                                 aCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCg                                   <  2:232924/100‑1 (MQ=255)

                                                                   gCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCa                                 >  2:3889130/1‑100 (MQ=255)

                                                                   gCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCa                                 >  1:50334/1‑100 (MQ=255)

                                                                   gCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCa                                 <  1:273242/100‑1 (MQ=255)

                                                                        aTCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGAcc                            >  1:1138944/1‑100 (MQ=255)

                                                                        aTCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGAcc                            >  2:59245/1‑100 (MQ=255)

                                                                         tCCGGCCTACATTCGCGCTCCCGTAGCCCGGATAAGCCGCATCAGCGTCGCATCAGGCAGCGCACGGACTGAGCGGTATTGCTTCAGCACCGCACGAccc                           <  1:3838453/100‑1 (MQ=38)

                                                                             gCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCg                       <  1:1307538/100‑1 (MQ=255)

                                                                              ccTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGt                      >  2:843026/1‑100 (MQ=255)

                                                                               cTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTc                     <  2:308665/100‑1 (MQ=255)

                                                                                tACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCa                    >  2:514668/1‑100 (MQ=255)

                                                                                tACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCa                    <  2:2372405/100‑1 (MQ=255)

                                                                                 aCATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAg                   <  1:876077/100‑1 (MQ=255)

                                                                                  cATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcctccggca                  <  1:4092742‑M2/100‑52 (MQ=255)

                                                                                   aTTCGTGCTCTCGTAGGCCTGATACGACGCTTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGGATTGCTTCAGCACCGCACGACCCAGCGTCAGGa                 <  1:2883057/100‑1 (MQ=38)

                                                                                   aTTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGa                 >  2:1918956/1‑100 (MQ=255)

                                                                                   aTTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGa                 <  1:66479/100‑1 (MQ=255)

                                                                                     tCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATc               <  1:1586684/100‑1 (MQ=255)

                                                                                       gTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGCTCTg             >  2:1617409/1‑100 (MQ=255)

                                                                                       gTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTg             <  2:1171856/100‑1 (MQ=255)

                                                                                       gTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTg             >  1:983075/1‑100 (MQ=255)

                                                                                        tGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGagatcg            >  1:4174229/1‑95 (MQ=255)

                                                                                        tGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGc            >  1:1694992/1‑100 (MQ=255)

                                                                                         gCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa           <  1:4215670/100‑1 (MQ=255)

                                                                                         gCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa           <  1:1773133/100‑1 (MQ=255)

                                                                                          cTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCAt          >  1:261741/1‑100 (MQ=255)

                                                                                            cccGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCAttt        >  1:2145972/1‑100 (MQ=255)

                                                                                              cGTAGGCCTGATAAGACTCATCAGCGTCGCATCAGGCAGCGCTCGGACTTAGCGGTATTGCTTCTGCACCGCACGTCTCAGCGTCAGGATCTGCATTTCg      <  1:3335767/100‑1 (MQ=38)

                                                                                               gTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGt     >  2:1067784/1‑100 (MQ=255)

                                                                                                tAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTc    <  2:1960491/100‑1 (MQ=255)

                                                                                                 aGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCa   <  1:925513/100‑1 (MQ=255)

                                                                                                  ggCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAg  <  1:2469692/100‑1 (MQ=255)

                                                                                                  ggCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACGTAGCGGTANTGCTTCAGCACCNCACGACCCAGCGTCAGGATCTGCATTTCGTCAg  <  1:3505641/100‑1 (MQ=255)

GGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAG  >  NC_000913/39102‑39299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.