| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 39200 | NA (NA) | 11 (0.080) | 7/164 | NT | NA | noncoding (50/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 39232 | NA (NA) | noncoding (82/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 232 total aligned reads displayed.
TTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGATCA > NC_000913/39133‑39331 | gTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgc > 2:4279483/1‑100 (MQ=255) tAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcg > 1:3724506/1‑98 (MQ=255) tAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCa < 1:823506/100‑1 (MQ=255) aGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgccc > 1:3356306/1‑98 (MQ=255) aGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCAc > 2:1815266/1‑100 (MQ=255) cgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGACCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACgg < 1:4003135/100‑1 (MQ=255) gcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGa < 2:2827484/100‑1 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc < 2:1314052/100‑1 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc < 2:1121070/100‑1 (MQ=255) cTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGc < 1:4358083/100‑1 (MQ=255) tGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCg > 1:3424218/1‑100 (MQ=255) tGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATAAGCGTCGCATCAGGCAGCGCACGGACTTAGCg > 2:4241961/1‑100 (MQ=255) gCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg > 2:3815766/1‑100 (MQ=255) ccGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGt < 2:2082313/100‑1 (MQ=255) cGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTa > 2:1988475/1‑100 (MQ=255) gATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTAtt < 1:2958643/100‑1 (MQ=255) tGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGc < 2:384420/100‑1 (MQ=255) gcggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCt < 2:4179286/100‑1 (MQ=255) gcggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCt < 1:602876/100‑1 (MQ=255) ggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTc < 2:3292444/100‑1 (MQ=255) gcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa < 2:3029721/100‑1 (MQ=255) aaCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAcc > 2:69494/1‑100 (MQ=255) aCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGTCTTAGCGGTATTGCTTCAGCACCg < 1:417347/100‑1 (MQ=255) aCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCg < 1:949811/100‑1 (MQ=255) aCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCg < 2:232924/100‑1 (MQ=255) cGCTTTATCCGGCCTACATTCCTGCTCCCGTACGCCTGATACGACGCATCAGCGTCGCACCAGGCAGCGCACGGACTTACCGGTATTGCTTCAGCAcc > 1:3529858/1‑98 (MQ=255) gCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCa < 1:273242/100‑1 (MQ=255) gCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCa < 2:1348804/100‑1 (MQ=255) cTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCAc > 1:4304459/1‑100 (MQ=255) aTCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGAcc > 1:1138944/1‑100 (MQ=255) tCCGGCCTACATTCGCGCTCCCGTAGCCCGGATAAGCCGCATCAGCGTCGCATCAGGCAGCGCACGGACTGAGCGGTATTGCTTCAGCACCGCACGAccc < 1:3838453/100‑1 (MQ=38) gCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCg < 1:1307538/100‑1 (MQ=255) tACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCa < 2:2372405/100‑1 (MQ=255) tACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCa > 2:514668/1‑100 (MQ=255) aTTCGTGCTCTCGTAGGCCTGATACGACGCTTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGGATTGCTTCAGCACCGCACGACCCAGCGTCAGGa < 1:2883057/100‑1 (MQ=38) aTTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGa < 2:3067045/100‑1 (MQ=255) ttCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGAt < 2:2064422/100‑1 (MQ=255) ttCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGAt > 2:1919873/1‑100 (MQ=255) gTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTg < 1:1918950/100‑1 (MQ=255) gTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTg > 1:983075/1‑100 (MQ=255) gTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTg > 1:528338/1‑100 (MQ=255) tGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGc < 2:2167085/100‑1 (MQ=255) gCTCCCGTCCGCCTGCTAAGACGCCTCAGCGTCCCCTCCGGCAGCGCACGGACTTAGCGGCATTGCCTCAGCACCGCACGACCCAGCGTCAGGATCTg < 1:4188142/98‑1 (MQ=255) gCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa < 1:1465772/100‑1 (MQ=255) gCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa < 1:4215670/100‑1 (MQ=255) gCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa < 1:1773133/100‑1 (MQ=255) cccGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCAttt > 1:2145972/1‑100 (MQ=255) cccGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCAttt > 1:782795/1‑100 (MQ=255) cccGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCAttt > 1:3028916/1‑100 (MQ=255) cGTAGGCCTGATAAGACTCATCAGCGTCGCATCAGGCAGCGCTCGGACTTAGCGGTATTGCTTCTGCACCGCACGTCTCAGCGTCAGGATCTGCATTTCg < 1:3335767/100‑1 (MQ=38) cGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCg < 2:1160432/100‑1 (MQ=255) aGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCa < 1:1679156/100‑1 (MQ=255) gCCTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcatgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaa < 2:3717849‑M2/100‑69 (MQ=255) ccTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaat < 1:636179‑M2/100‑70 (MQ=255) ccTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaat < 2:3991272‑M2/100‑70 (MQ=255) ccTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGAt > 1:2611461/1‑100 (MQ=255) ccTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCGTCAGCACCGCACGACACAGCGTCAGGATCTGCATTTCGTCAGa > 1:3278998/1‑99 (MQ=255) tGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaattt < 1:4078623‑M2/100‑72 (MQ=255) gATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttt < 2:1072621‑M2/100‑73 (MQ=255) gATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATccc > 2:1805461/1‑100 (MQ=255) aGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCgg > 1:1353993/1‑100 (MQ=255) aGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCgg > 1:100741/1‑100 (MQ=255) gACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGga > 2:1960282/1‑100 (MQ=255) aCGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGgag < 2:1589742/100‑1 (MQ=255) cGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGgaga > 2:3094290/1‑100 (MQ=255) gCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGAc > 1:2080633/1‑100 (MQ=255) cATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGAcg > 2:1511785/1‑100 (MQ=255) cATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGAcg < 2:2924748/100‑1 (MQ=255) cATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACAGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGCAGAcg > 2:1063271/1‑100 (MQ=255) tgatgCGTCTTATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGAcgc > 1:22958/5‑100 (MQ=255) tCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGAcgcg > 2:3192007/1‑100 (MQ=255) cAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCgg > 2:2427673/1‑100 (MQ=255) aGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGt > 1:2426087/1‑100 (MQ=255) gCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTc < 2:2647267/100‑1 (MQ=255) gTCGCATCAGGCAGCGCACGGACGTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTa < 1:313270/100‑1 (MQ=255) tagCATCAGGAAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTac < 1:1841079/98‑1 (MQ=255) gCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTacac < 1:1612315/100‑1 (MQ=255) cATCAGGCAGCGCACGGACTTAGCGGTATTTCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGTTCTCCCGGAGACGCGGTCTACACg < 1:2552003/100‑1 (MQ=255) cATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACg > 1:1574111/1‑100 (MQ=255) aTCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatca < 2:2779743‑M2/100‑94 (MQ=255) aTCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatca > 2:1176517‑M2/1‑7 (MQ=255) tCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcat < 1:13641‑M2/100‑95 (MQ=255) tCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgatacataaatttttcaggagcaaataatggatcat < 1:2318309‑M2/100‑95 (MQ=255) tCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCa > 2:3873538/1‑100 (MQ=255) tCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCa < 2:84431/100‑1 (MQ=255) cAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatc > 1:3870934‑M2/1‑5 (MQ=255) cAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatc > 2:4005448‑M2/1‑5 (MQ=255) cAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatc < 1:3637033‑M2/100‑96 (MQ=255) cAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatc > 2:589886‑M2/1‑5 (MQ=255) cAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatc > 2:590854‑M2/1‑5 (MQ=255) cAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAg < 2:2621563/100‑1 (MQ=255) cAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAg > 2:832696/1‑100 (MQ=255) aGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGa < 1:1991533/100‑1 (MQ=255) ggCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatcta < 2:338321‑M2/100‑98 (MQ=255) ggCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGAt > 2:4062454/1‑100 (MQ=255) gCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatctac < 2:3570318‑M2/100‑99 (MQ=255) gCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatctac < 1:3162389‑M2/100‑99 (MQ=255) gCctacgggagcacgaatgtaggccggagaaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatctac > 1:258082‑M2/1‑2 (MQ=255) cctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatctacc > 1:782070‑M2/1‑1 (MQ=255) cctacgggagcacgaatgtaagccggctaaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaatactgcatcatct < 1:1286341‑M2/97‑97 (MQ=255) | TTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGATCA > NC_000913/39133‑39331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |