| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1069018 = | 115 (0.730) | 25 (0.170) | 12/164 | NT | 20.1% | coding (822/1329 nt) | rutG | pyrimidine permease |
| ? | NC_000913 | 1069048 = | 93 (0.640) | coding (792/1329 nt) | rutG | pyrimidine permease | |||||
Only 100 of 173 total aligned reads displayed.
GCCGGAAAGCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAGACCGAACCAGGC > NC_000913/1068949‑1069146 | gCCGGAAAGCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGCTGACCt > 1:4184267/1‑100 (MQ=255)gCCGGAAAGCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCt > 2:4123903/1‑100 (MQ=255) ctgcttttaatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTa > 1:3364700‑M1/69‑100 (MQ=255) ctgcttttaatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTa > 2:1564782‑M1/69‑100 (MQ=255) ctgcttttaatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTa > 2:3119218‑M1/69‑100 (MQ=255) ctgcttttaatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTa > 1:1166656‑M1/69‑100 (MQ=255) ctgcttttaatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTa > 2:916083‑M1/69‑100 (MQ=255) ctgcttttaatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTa > 1:3505881‑M1/69‑100 (MQ=255) tgcttttaatggtcatgcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTaa > 2:4338133‑M1/68‑100 (MQ=255) tgcttttaatgggcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTaa > 2:2383362‑M1/68‑100 (MQ=255) ggAAAGCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAg > 1:3765420/1‑100 (MQ=255) ggAAAGCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAg > 2:2628369/1‑100 (MQ=255) ggAAAGCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGACATCCCGGCGACTGCCTTGAGATGACCTatg < 2:2962442/100‑3 (MQ=255) gAAAGCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGt < 2:2752181/100‑1 (MQ=255) cttttaatggtcatgcaatgatgctgatcgcgcccgtggcggtgattcttgtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTAAg > 1:1064793‑M1/66‑99 (MQ=255) cttttaatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGt > 2:2092653‑M1/66‑100 (MQ=255) ttttaatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGtt > 2:3915548‑M1/65‑100 (MQ=255) taatggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTc > 2:1599745‑M1/62‑100 (MQ=255) gCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTc < 1:1806575/100‑1 (MQ=255) cATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTcc > 2:60786/1‑100 (MQ=255) cATCGTTGCCAGACCATCGCCTACGAATGCCCGCACCATATACGGGTCCATATTGAGTCAGGTAATCCCGGCGACTGCCTTGAGATGACCTAAGtttt > 1:894360/1‑98 (MQ=255) atggtcaggcaatgatgctgattgcgcccgtggcggtgattctggtggcggaaaacttaGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCg > 1:1084537‑M1/60‑100 (MQ=255) aTCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGTATCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCg < 1:1516877/100‑1 (MQ=255) aTCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGTCTTGAGATGACCTAAGTTTTCCg < 1:1023153/100‑1 (MQ=255) gTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGCCCTAAGTTTTCCGcca > 2:1739847/1‑100 (MQ=255) gTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGcca < 1:1033864/100‑1 (MQ=255) ttGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGccac < 1:3368193/100‑1 (MQ=255) gCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGccacca < 1:626505/100‑1 (MQ=255) gCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGccacca > 2:208530/1‑100 (MQ=255) gCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGccacca > 2:3713796/1‑100 (MQ=255) ccAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAg > 2:2136107/1‑100 (MQ=255) cAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGa < 2:869905/100‑1 (MQ=255) cAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGa > 2:435838/1‑100 (MQ=255) aGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGaa < 2:1845459/100‑1 (MQ=255) ccATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCa < 1:4093676/100‑1 (MQ=255) cATCGCCTACGAATGCCCGCCCCATAGACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAAt < 1:4081454/97‑1 (MQ=255) gCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGcc > 2:807607/1‑100 (MQ=255) gCCTACGAATGACCGCCCCATATACGGGTGCATATTGCGTCCGGTCATCCCGGAGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGGATCAcc > 1:3239632/1‑97 (MQ=255) cTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCAc > 2:1194497/1‑100 (MQ=255) tacagaTGCCGGCCCGATATACGGGTCCAAATTGCGTGCAGTCATCACGGCGACTGCCTTGAGATGTACTATTTTTTTTGCCAGCATAATCACCg < 1:285372/90‑1 (MQ=255) tACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACg < 2:3435488/100‑1 (MQ=255) tACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACg > 1:699638/1‑100 (MQ=255) aCGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACgg < 1:1605850/100‑1 (MQ=255) cGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACggg > 2:1163271/1‑100 (MQ=255) cGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACgg > 2:3136159/1‑99 (MQ=255) cGAATGCCCGCCCCATATACGGGGCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACgg < 1:2009239/99‑1 (MQ=255) aaTGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGgcg < 1:3846802/100‑1 (MQ=255) aaTGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGgcg < 1:341037/100‑1 (MQ=255) cccATATACGTGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCCTGAGATGACATAAGTTTTCCGCCACCAGACTCACCGCCACGGGCGCAATCAGca < 1:3691713/100‑1 (MQ=255) cccATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGca > 2:100641/1‑100 (MQ=255) taCGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTg < 2:2578020/100‑1 (MQ=255) cGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGcc < 2:113486/100‑1 (MQ=255) ggTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTg < 1:2208296/100‑1 (MQ=255) ggTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTg > 2:418651/1‑100 (MQ=255) ggTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTg < 2:4240139/100‑1 (MQ=255) ggTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTg > 1:4054546/1‑100 (MQ=255) ccATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGAcc < 2:4376756/100‑1 (MQ=255) cATATTGCGTGCGGTTATCCCGGCCACTGCCTTGAGATGACCTACGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGAc < 1:1995516/98‑1 (MQ=255) cggaaaacttaggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCAt > 1:1084537‑M2/42‑100 (MQ=255) tatTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCAtt > 1:3634677/1‑100 (MQ=255) tatTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCAtt < 1:3571341/100‑1 (MQ=255) ggaaaacttaggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCAtt > 1:3653358‑M2/41‑100 (MQ=255) gaaaacttaggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTa > 2:1599745‑M2/40‑100 (MQ=255) gCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTaaaa < 1:1266064/100‑1 (MQ=255) aacttaggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTaaaa > 2:3915548‑M2/37‑100 (MQ=255) aacttaggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTaaaa > 2:1053544‑M2/37‑100 (MQ=255) cGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAg < 2:560060/100‑1 (MQ=255) acttaggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAg > 1:2250448‑M2/36‑100 (MQ=255) cttaggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGc > 2:1741543‑M2/35‑100 (MQ=255) tCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTaaaa < 1:3228543/97‑1 (MQ=255) tCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCa > 2:204621/1‑100 (MQ=255) cGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAgg < 1:3551052/100‑1 (MQ=255) cGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAgg < 1:3449789/100‑1 (MQ=255) ggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGa > 2:1962130‑M2/31‑100 (MQ=255) ggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGa > 2:1456840‑M2/31‑100 (MQ=255) ggtcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGa > 2:276016‑M2/31‑100 (MQ=255) GGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGa < 2:4176718‑M1/100‑1 (MQ=255) GTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAg > 1:3205796‑M1/1‑100 (MQ=255) GTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAg > 1:1915001‑M1/1‑100 (MQ=255) GTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAg > 2:157287‑M1/1‑100 (MQ=255) GTCATCCCGGCGACTGCCTTGAGATGAACTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAg < 2:1520176‑M1/100‑1 (MQ=255) tcatctcaaggcagtcgccgggatgaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAg > 2:2469394‑M2/29‑99 (MQ=255) CATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTg > 1:2251625‑M1/1‑100 (MQ=255) ATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTgg < 1:281138‑M1/100‑1 (MQ=255) TCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGa < 1:257753‑M1/100‑1 (MQ=255) CCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGaa < 1:957640‑M1/100‑1 (MQ=255) CCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGaa < 1:3629508‑M1/100‑1 (MQ=255) ggCGACTGCCTTGAGATGGCCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGaaaaa < 1:1288664/100‑1 (MQ=255) gCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGaaaaa < 1:3927787/99‑1 (MQ=255) cGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAAtg > 2:1861011/1‑100 (MQ=255) cTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTgg < 2:1291918/100‑1 (MQ=255) cTGCCTTGAGATGACCTAAGGTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTCAAAGCAGGAGTGGAAAAAtgtg < 1:438848/99‑1 (MQ=255) tGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGc < 1:1173895/100‑1 (MQ=255) ccTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAg > 1:3836869/1‑100 (MQ=255) cTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAGa > 1:140416/1‑100 (MQ=255) gaccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAGACCGAACCa < 2:957249‑M2/96‑1 (MQ=255) accTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAGACCGAACCAg < 2:3266719‑M2/97‑1 (MQ=255) accGAAGTTTTCCGCCACCAGAATCACCGCCACAGGCGGAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAGACCGAACCAg < 1:3570407‑M2/97‑1 (MQ=255) ccTAAGTTTTCCGCCACCAGCATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAGACCGAACCAgg > 1:2688048‑M2/3‑100 (MQ=255) ccTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAGACCGAACCAgg > 1:1682818‑M2/3‑100 (MQ=255) | GCCGGAAAGCATCGTTGCCAGACCATCGCCTACGAATGCCCGCCCCATATACGGGTCCATATTGCGTCCGGTCATCCCGGCGACTGCCTTGAGATGACCTAAGTTTTCCGCCACCAGAATCACCGCCACGGGCGCAATCAGCATCATTGCCTGACCATTAAAAGCAGGAGTGGAAAAATGTGGCAGACCGAACCAGGC > NC_000913/1068949‑1069146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |