New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1190585NA (NA)5 (0.030) 4/166 NT NA noncoding (6/23 nt) REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 1190596 NA (NA)noncoding (17/23 nt) REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 172 total aligned reads displayed.

GGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTT  >  NC_000913/1190497‑1190695
                                                                                                   |                                                                                                   
ggTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCa                                                                                                     >  2:3528390/1‑100 (MQ=255)
ggTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCa                                                                                                     >  1:743945/1‑100 (MQ=255)
  ttATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtc                                                                                                   <  2:3724650‑M2/100‑3 (MQ=255)
   tATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtcc                                                                                                  <  1:648483‑M2/100‑4 (MQ=255)
   tATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtcc                                                                                                  <  2:1651523‑M2/100‑4 (MQ=255)
    aTGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtccg                                                                                                 <  1:741391‑M2/100‑5 (MQ=255)
     tGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGCAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACCGCATCGCCAtccgg                                                                                                <  1:1253807‑M2/100‑6 (MQ=255)
      gggggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtccgg                                                                                                <  2:2679126‑M2/99‑6 (MQ=255)
       ggggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtccggc                                                                                               >  1:1583926‑M2/1‑93 (MQ=255)
        gggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCAc                                                                                             <  2:3949991/100‑1 (MQ=255)
        gggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCAc                                                                                             >  2:451925/1‑100 (MQ=255)
         ggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACt                                                                                            <  2:1122821/100‑1 (MQ=255)
         ggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACt                                                                                            >  2:3161834/1‑100 (MQ=255)
         ggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGCGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACt                                                                                            <  1:1975842/100‑1 (MQ=255)
             aaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATa                                                                                        <  2:2229875/100‑1 (MQ=255)
              aCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATAc                                                                                       >  1:1468138/1‑100 (MQ=255)
               cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACg                                                                                      <  1:3724626/100‑1 (MQ=255)
               cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACg                                                                                      >  1:2052326/1‑100 (MQ=255)
               cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGAATCGCCATGCGGCACTGATa                                                                                        >  1:1030307/1‑98 (MQ=255)
                aTTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCACCGCCATCCGGCACTGATACGa                                                                                     >  1:2181085/1‑100 (MQ=255)
                      taaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTa                                                                               <  2:25644/100‑1 (MQ=255)
                       aaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAt                                                                              >  2:3120644/1‑100 (MQ=255)
                       aaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAt                                                                              >  2:3867758/1‑100 (MQ=255)
                        aaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAtt                                                                             <  2:2703442/100‑1 (MQ=255)
                         aCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAttt                                                                            >  1:4011539/1‑100 (MQ=255)
                          ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc                                                                           >  2:2783754/1‑100 (MQ=255)
                           cAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGATAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCa                                                                          <  2:1659912/100‑1 (MQ=255)
                           cAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCa                                                                          >  1:1160630/1‑100 (MQ=255)
                           cAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCa                                                                          <  1:3365345/100‑1 (MQ=255)
                            aGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCa                                                                          <  1:4275029/99‑1 (MQ=255)
                             gCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGc                                                                        <  2:1872666/100‑1 (MQ=255)
                             gCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGc                                                                        <  2:3630945/100‑1 (MQ=255)
                              cGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCt                                                                       <  2:1434056/100‑1 (MQ=255)
                               gggggggggaGGTAAAGGAAAAAAAAAAAAACCGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAg                                                                         <  2:2802052/96‑1 (MQ=255)
                               ggggaggggaGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCt                                                                       <  2:1826334/99‑1 (MQ=255)
                                gggaggggagGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtca                                                                     >  2:3066973/1‑100 (MQ=255)
                                 ggaggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtcat                                                                    <  2:284608/100‑1 (MQ=255)
                                  gaggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtcatc                                                                   <  2:3657810/100‑1 (MQ=255)
                                   aggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtcatca                                                                  <  2:3181517/100‑1 (MQ=255)
                                    ggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCaa                                                                 >  2:227940/1‑100 (MQ=255)
                                    ggggaagTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtca                                                                     <  1:4121577/96‑1 (MQ=255)
                                      ggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAAcc                                                               >  2:3892898/1‑100 (MQ=255)
                                      ggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAAcc                                                               >  1:1325916/1‑100 (MQ=255)
                                       gaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCa                                                              <  2:3336269/100‑1 (MQ=255)
                                        aggTAAAGTGAAAAAAAAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAAcc                                                               <  1:3365164/98‑1 (MQ=255)
                                          gTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCg                                                           >  2:1272019/1‑100 (MQ=255)
                                           tAAAGTGAAAAAATAAAAAGCGGATAATCTTGATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGt                                                          <  2:411921/100‑1 (MQ=255)
                                           tAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGTCCGGTCAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCg                                                           <  1:3049966/99‑1 (MQ=255)
                                           tAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCg                                                           >  2:4270754/1‑99 (MQ=255)
                                           tAAAGTGAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg                                                         >  1:2177074/1‑100 (MQ=255)
                                            aaaGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg                                                         >  2:685722/1‑100 (MQ=255)
                                            aaaGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg                                                         <  1:670456/100‑1 (MQ=255)
                                             aaGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGa                                                        <  2:607989/100‑1 (MQ=255)
                                              aGTTAAAAAATAAAAAGCGGATAATCTTAATAAGCAGTCCGGACAGCATCTCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGAt                                                       <  1:960026/100‑1 (MQ=255)
                                               gTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATa                                                      <  2:2196527/100‑1 (MQ=255)
                                               gTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGGTTATTTCAGCACATCAACCATCGGGATa                                                      >  2:3955408/1‑100 (MQ=255)
                                                tGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAg                                                     >  1:574639/1‑100 (MQ=255)
                                                tGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAg                                                     <  1:2428470/100‑1 (MQ=255)
                                                 gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                                    >  1:4060923/1‑100 (MQ=255)
                                                 gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                                    >  2:353810/1‑100 (MQ=255)
                                                   aaaaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTc                                                  >  2:1561350/1‑100 (MQ=255)
                                                         aaaaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCaa                                            <  1:2782294/100‑1 (MQ=255)
                                                          aaaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAat                                           >  2:1047957/1‑100 (MQ=255)
                                                             aGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAAtata                                        >  1:1419265/1‑100 (MQ=255)
                                                             aGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAAtata                                        <  2:3838807/100‑1 (MQ=255)
                                                                  aTAATCTTAATAAGCTGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCATCCATCGTGATAGCTCGACCAATATAGtt                                     <  1:3883935/98‑1 (MQ=255)
                                                                    aaTCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGcc                                 <  1:839572/100‑1 (MQ=255)
                                                                        ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg                             <  1:195830/100‑1 (MQ=255)
                                                                        ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg                             >  1:4218335/1‑100 (MQ=255)
                                                                         taataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGt                            >  2:4028403/1‑100 (MQ=255)
                                                                         taataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGt                            <  1:3528371/100‑1 (MQ=255)
                                                                           ataaGCAGGCCGGACAGCATCGCCAtccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttatttaatgt                          <  1:1065315‑M2/100‑76 (MQ=255)
                                                                           ataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCa                          >  1:3228814/1‑100 (MQ=255)
                                                                              aGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATc                        >  2:1932721/1‑99 (MQ=255)
                                                                               gCAGGCCGGACAGCATCGCCAtccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttttttaatgttt                        <  1:2950049‑M2/98‑78 (MQ=255)
                                                                               gCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGc                      >  2:1056709/1‑100 (MQ=255)
                                                                               gCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGc                      >  1:2662756/1‑100 (MQ=255)
                                                                                cAGGCCGGACAGCATCGCCAtccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttatttaatgtttacc                     <  1:155975‑M2/100‑81 (MQ=255)
                                                                                cAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCt                     <  1:345259/100‑1 (MQ=255)
                                                                                 aGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTCTTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGCCGTCATCGc                      >  1:3667410/1‑98 (MQ=255)
                                                                                  ggCCGGACAGCATCGCCAtccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttatttaatgtttacc                     <  1:567362‑M2/98‑81 (MQ=255)
                                                                                  ggCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCttt                   >  2:3453388/1‑100 (MQ=255)
                                                                                   gCCGGGCAGCATCGCCATCCGCCACTGATACGATCTTTATTGCAGCCCATCAACTATCGTGATAGCTCGTCCTACATAGTTAGCCGGCGTCATCTCTTTc                  >  1:3856267/1‑100 (MQ=255)
                                                                                    ccGGACAGCATCGCCATCCGGCACTGATACTAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCa                 <  1:1526772/100‑1 (MQ=255)
                                                                                    ccGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCa                 <  2:3641776/100‑1 (MQ=255)
                                                                                       gACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGc              <  2:2985943/100‑1 (MQ=255)
                                                                                          aGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCggg           >  1:224378/1‑100 (MQ=255)
                                                                                           gCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGc          >  1:1726096/1‑100 (MQ=255)
                                                                                           gCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGc          <  2:3970167/100‑1 (MQ=255)
                                                                                           gCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGATCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCCTTCAGGCGGGc          >  1:2348678/1‑100 (MQ=255)
                                                                                             aTCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCtt        >  2:1274184/1‑100 (MQ=255)
                                                                                              tCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCttt       >  2:2404898/1‑100 (MQ=255)
                                                                                               cGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtc      <  1:1094155/100‑1 (MQ=255)
                                                                                                gCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtct     >  1:369377/1‑100 (MQ=255)
                                                                                                gCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtct     >  2:3307491/1‑100 (MQ=255)
                                                                                                gCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtct     >  1:1133520/1‑100 (MQ=255)
                                                                                                 ctatccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttatttaatgtttacccccataaccacataatc    >  1:1659907‑M2/3‑3 (MQ=255)
                                                                                                 ccATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtctc    <  2:3357721/100‑1 (MQ=255)
                                                                                                   aTCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGAGCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtctt  >  1:3128504/1‑100 (MQ=255)
                                                                                                   aTCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtctt  <  2:2166841/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTT  >  NC_000913/1190497‑1190695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.