BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1294420 =	NA (NA)	8 (0.050)	6/168	NT	NA	intergenic (+276/+6)	tdk/insZ	thymidine kinase/deoxyuridine kinase/pseudogene, transposase homolog
*	?	NC_000913	1294445 =	NA (NA)	8 (0.050)	6/168	NT	NA	noncoding (961/980 nt)	ISZ	repeat region

Only 100 of 198 total aligned reads displayed.

TGATGAAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGA  >  NC_000913/1294346‑1294543

tgatgaAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCAc                                                                                                    <  1:356875/100‑1 (MQ=255)

ataacaaaacgcccccgaccatcaaggccgaggtcggttaagatatcaaaaacccgttatcctgtgaaacatagTGCCGTTCACTTAAGAGGAGCGGCAc                                                                                                    >  1:2021944‑M1/75‑100 (MQ=255)

  atgaAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTa                                                                                                  >  2:473631/1‑100 (MQ=255)

  atgaAGGCTAATGCTGTCGGTTTATGGAAAA‑TTGCTTTCGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTAt                                                                                                 <  1:2574045/100‑1 (MQ=255)

    gaAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATg                                                                                                >  1:1688408/1‑100 (MQ=255)

    caacacccccccgaccatcaaggccgaggtcggttaaggaatcaaaaacccgttatcctgtgaaacatagTGCCGTTCACTTAAGAGGAGCGGCACTATg                                                                                                >  1:2385911‑M1/71‑100 (MQ=255)

     aaaatgaccccgaccatcaaggactgggtcggtgaagaaatcaaaaacccgttatcctgtgaaacatagTGCCGTTCACTTAAGAGGAGCGGCACTATg                                                                                                >  1:905195‑M1/70‑99 (MQ=255)

     aaGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGt                                                                                               <  1:3805487/100‑1 (MQ=255)

     aaGGCTAATGCTGTCGGTATATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCACAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGAACTATg                                                                                                >  1:3681722/1‑99 (MQ=255)

       ggCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGttt                                                                                             >  2:1853381/1‑100 (MQ=255)

       ggCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGT‑AACAAAAAATACGGCCCCAGAAAGGCAATGCCGGTCACTTAAGAGGAGCGGCACTATGgtt                                                                                             >  1:1370830/1‑99 (MQ=255)

        gCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTc                                                                                            <  2:1475860/100‑1 (MQ=255)

         cTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTca                                                                                           >  2:1547996/1‑100 (MQ=255)

          tAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAAGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTc                                                                                            <  1:106209/98‑1 (MQ=255)

            aTGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAg                                                                                        <  2:2320975/100‑1 (MQ=255)

             tGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAgg                                                                                       <  2:3122492/100‑1 (MQ=255)

             tGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAgg                                                                                       <  2:3226258/100‑1 (MQ=255)

                 gTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATaa                                                                                   >  2:4133497/1‑100 (MQ=255)

                  tCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAAc                                                                                  <  1:4197744/100‑1 (MQ=255)

                  ccatcaaggccgaggtcggttaagatatcaaaaacccgttatcctgtgaaacatagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAAc                                                                                  >  2:4114089‑M2/82‑100 (MQ=255)

                    ggTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACgg                                                                                >  1:4117269/1‑100 (MQ=255)

                    ggTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACgg                                                                                >  2:768074/1‑100 (MQ=255)

                      tttATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGt                                                                              <  1:3822385/100‑1 (MQ=255)

                          tGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGttttt                                                                          >  2:1011293/1‑100 (MQ=255)

                          tGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGttttt                                                                          >  2:4397411/1‑100 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         >  2:4362264/1‑100 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         <  1:2229057/100‑1 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         <  2:1591927/100‑1 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         <  2:17059/100‑1 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         >  1:3441692/1‑100 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         <  1:3403980/100‑1 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         >  1:2811754/1‑100 (MQ=255)

                            gAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGa                                                                        <  2:332321/100‑1 (MQ=255)

                            gAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGa                                                                        >  2:452238/1‑100 (MQ=255)

                            gAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGa                                                                        <  1:768072/100‑1 (MQ=255)

                             aaaaGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGTCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTCGa                                                                        <  1:2771007/99‑1 (MQ=255)

                              aaaGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGata                                                                      <  1:2095422/100‑1 (MQ=255)

                                aGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATc                                                                    >  1:3108384/1‑100 (MQ=255)

                                 gTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCt                                                                   >  1:3212949/1‑100 (MQ=255)

                                  ttGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCACTGCCGTTCACTTCAGAGGAGCGACACTATGTTTCACAGGATAACGGGTTTTTGAAATCtt                                                                  >  2:4324431/1‑100 (MQ=255)

                                  ttGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCtt                                                                  <  2:4184231/100‑1 (MQ=255)

                                    gCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTaa                                                                >  1:1870877/1‑100 (MQ=255)

                                       ttGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCg                                                             <  2:2163518/100‑1 (MQ=255)

                                          ggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGAcc                                                          >  2:1727320/1‑100 (MQ=255)

                                          ggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGAcc                                                          >  1:2659555/1‑100 (MQ=255)

                                          ggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGAcc                                                          <  2:735448/100‑1 (MQ=255)

                                          ggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGAcc                                                          >  1:2845500/1‑100 (MQ=255)

                                              aaCAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCgg                                                      >  2:3760895/1‑100 (MQ=255)

                                               aCAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGc                                                     >  1:1787571/1‑100 (MQ=255)

                                                cAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGcc                                                    >  2:2584476/1‑100 (MQ=255)

                                                cAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGcc                                                    <  2:276723/100‑1 (MQ=255)

                                                cAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGcc                                                    >  1:3514772/1‑100 (MQ=255)

                                                  aaaaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCtt                                                  >  2:1013050/1‑100 (MQ=255)

                                                    aaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGa                                                <  1:4288264/100‑1 (MQ=255)

                                                     aaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGAGAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGAt                                               <  1:2705855/100‑1 (MQ=255)

                                                       tACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGATCGGCACTATGTTTCACAGGTTAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATgg                                             <  1:2401976/100‑1 (MQ=255)

                                                       tACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATgg                                             <  1:1560090/100‑1 (MQ=255)

                                                       tACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATgg                                             <  2:1041003/100‑1 (MQ=255)

                                                       tACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATgg                                             <  2:3737737/100‑1 (MQ=255)

                                                        aCGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGt                                            >  2:2881113/1‑100 (MQ=255)

                                                             cccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATACCGGGCTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgggg                                       >  2:1124491/1‑100 (MQ=255)

                                                             cccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgggg                                       >  2:3917271/1‑100 (MQ=255)

                                                             cccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgggg                                       >  2:1734557/1‑100 (MQ=255)

                                                              tgtgaaacatagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgggg                                       >  1:1484575‑M2/38‑99 (MQ=255)

                                                              ccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCggggg                                      >  2:4038242/1‑100 (MQ=255)

                                                               cAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGc                                     >  2:822053/1‑100 (MQ=255)

                                                               cAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGc                                     <  1:2485885/100‑1 (MQ=255)

                                                                 gaaacatagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGt                                   >  2:4157201‑M2/35‑100 (MQ=255)

                                                                   aGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGt                                   <  1:3014072/98‑1 (MQ=255)

                                                                    gggCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGtttt                                <  1:384651/100‑1 (MQ=255)

                                                                    gggCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGtttt                                <  1:3917246/100‑1 (MQ=255)

                                                                     catagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTCACCGACCTCGGCCTTGATGGTCGGGGGCGttt                                 >  1:592111‑M2/31‑98 (MQ=255)

                                                                      gCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGt                              <  1:4373761/100‑1 (MQ=255)

                                                                      atagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGt                              >  1:1800971‑M2/30‑100 (MQ=255)

                                                                       cAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGtt                             <  2:2923517/100‑1 (MQ=255)

                                                                        ttccgatctCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTa                            <  1:3667486/92‑1 (MQ=255)

                                                                          TGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATg                          >  2:301483‑M1/1‑100 (MQ=255)

                                                                           gacGTGCACTGAGGAGGAGCGGCGCTCGGTGTAACAGGGTAGCGGGTGTTTGAGTTTTTAGTCGATCTCGGTCTTGATGGTCGGGGGCGTTTTGTTa                            <  1:4005659/95‑1 (MQ=255)

                                                                           GCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGa                         <  1:3789741‑M1/100‑1 (MQ=255)

                                                                           GCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGa                         <  2:62129‑M1/100‑1 (MQ=255)

                                                                             CGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAac                       >  1:1124487‑M1/1‑100 (MQ=255)

                                                                               ttCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAacac                     <  2:696810/100‑1 (MQ=255)

                                                                                tCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcacc                    <  2:1291411/100‑1 (MQ=255)

                                                                                 cACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTaagatcggaa                   >  2:3667508/1‑91 (MQ=255)

                                                                                 cACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcacca                   >  2:3934286/1‑100 (MQ=255)

                                                                                   cTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGTTATCTTAACCGACCTCGGCCTTGATGGTCTGGGGCGTTTTGTTATGAACACCACt                 >  1:129002/1‑100 (MQ=255)

                                                                                   cTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACt                 >  1:374778/1‑100 (MQ=255)

                                                                                   cTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACt                 >  1:122701/1‑100 (MQ=255)

                                                                                     tAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTc               >  1:702124/1‑100 (MQ=255)

                                                                                     tAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTc               >  2:2695244/1‑100 (MQ=255)

                                                                                       agagGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCa             >  1:1411303/1‑100 (MQ=255)

                                                                                        gaggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCag            <  2:3280218/100‑1 (MQ=255)

                                                                                        gaggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCag            <  1:2306077/100‑1 (MQ=255)

                                                                                        gaggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCag            >  2:600680/1‑100 (MQ=255)

                                                                                          ggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCagag          >  1:1097272/1‑100 (MQ=255)

                                                                                          ggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCagag          <  2:3834968/100‑1 (MQ=255)

                                                                                          ggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCagag          <  2:2850775/100‑1 (MQ=255)

                                                                                           gagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGc         >  2:2002290/1‑100 (MQ=255)

                                                                                             gCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAc       <  2:203558/100‑1 (MQ=255)

                                                                                             gCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAc       <  2:2529920/100‑1 (MQ=255)

TGATGAAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGA  >  NC_000913/1294346‑1294543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.