New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2539674NA (NA)27 (0.190) 15/164 NT NA intergenic (‑91/+43) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit
?NC_000913 = 2539688 NA (NA)intergenic (‑105/+29) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit

Only 100 of 254 total aligned reads displayed.

CTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCCGCG  >  NC_000913/2539589‑2539787
                                                                                                   |                                                                                                   
   tCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtcc                                                                                                  >  1:2508005‑M2/1‑97 (MQ=255)
      aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                               >  2:3720171‑M2/1‑94 (MQ=255)
       tACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggc                                                                                              >  2:1366425‑M2/1‑93 (MQ=255)
        agcgtatcgaaacccgcgatgaggaacttgctctcgcacaaagcgcctgataggttgagtgaatgttaaacGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                                                                             >  1:1366843‑M1/72‑100 (MQ=255)
          gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                                                                           <  1:3215826/100‑1 (MQ=255)
             atcgaaacccgcgatgaggaacttgctctcgcacaaagcgcctgataggttgagtgaatgttaaacGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTaa                                                                                        >  2:4361180‑M1/67‑100 (MQ=255)
              tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                       <  1:3174664/100‑1 (MQ=255)
              tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                       <  1:3026893/100‑1 (MQ=255)
              tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                       >  2:1671884/1‑100 (MQ=255)
              tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                       <  2:2517325/100‑1 (MQ=255)
              tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTACCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                       >  1:2452123/1‑100 (MQ=255)
               gtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACa                                                                                      >  2:1575620/1‑100 (MQ=255)
                  gCCTGATGCGACGCTTTCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCCTTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                   >  1:1037533/1‑100 (MQ=255)
                  gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                   >  2:631318/1‑100 (MQ=255)
                  gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                   >  2:1512160/1‑100 (MQ=255)
                  gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                   <  1:1786825/100‑1 (MQ=255)
                  aacccgcgatgaggaacttgctctcgcacaaagcgcctgataggttgagtgaatgttaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACattn                                                                                   >  2:283824‑M1/62‑99 (MQ=255)
                   ccTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCa                                                                                  >  2:1946848/1‑100 (MQ=255)
                   ccTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCa                                                                                  >  2:2303265/1‑100 (MQ=255)
                     tGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                                >  2:3495008/1‑100 (MQ=255)
                        tGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCaa                                                                             >  2:3974033/1‑100 (MQ=255)
                         gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                                                                            <  1:1935290/100‑1 (MQ=255)
                          cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                                                                           >  1:3074779/1‑100 (MQ=255)
                          cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                                                                           <  1:4104152/100‑1 (MQ=255)
                             cGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTAt                                                                        >  2:3992357/1‑100 (MQ=255)
                              gCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATc                                                                       >  2:112176/1‑100 (MQ=255)
                              gCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATc                                                                       <  1:1209906/100‑1 (MQ=255)
                               cTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCa                                                                      <  2:2501763/100‑1 (MQ=255)
                               cTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCa                                                                      <  1:396272/100‑1 (MQ=255)
                                ttgaggatgttATCAGGTCTACAGCTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCATTTATCATTCACTCACCCTATCAg                                                                     <  1:324667/91‑1 (MQ=255)
                                 tgagcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAATAGCCCGGAGCGCGGGAAGCGCCTCCGGGTGTTTAACATTCACTCAACCTATCAg                                                                     <  1:705031/96‑1 (MQ=255)
                                  gcgcGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgc                                                                   <  2:3279523/100‑1 (MQ=255)
                                   cgcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgcg                                                                  >  1:3575177/1‑100 (MQ=255)
                                   cgcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgcg                                                                  <  1:345552/100‑1 (MQ=255)
                                    gcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgcgc                                                                 <  2:2799431/100‑1 (MQ=255)
                                     cgTCTTATCAGGTCTACAGGTTAGAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCTGGGCGTTTAACATTCACTCAACCTATCAGgc                                                                   <  1:640875/97‑1 (MQ=255)
                                      gTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCtt                                                               >  1:2224917/1‑100 (MQ=255)
                                       tCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCttt                                                              >  2:3707502/1‑100 (MQ=255)
                                       tCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCttt                                                              >  2:1800640/1‑100 (MQ=255)
                                        cTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtg                                                             >  1:2333946/1‑100 (MQ=255)
                                         ttATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgt                                                            >  2:4157042/1‑100 (MQ=255)
                                          tATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgtg                                                           >  1:1516420/1‑100 (MQ=255)
                                           aTCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGc                                                          <  2:3575196/100‑1 (MQ=255)
                                              aGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgag                                                       <  2:1046997/100‑1 (MQ=255)
                                               ggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgag                                                       <  1:1422901/99‑1 (MQ=255)
                                                gTCTATAGGTTACATACCTTGCCTTTAAAAAGCCCGGATCGCGGGAAGCGCCGCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgag                                                       <  1:1988293/98‑1 (MQ=255)
                                                gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                                     <  1:4203676/100‑1 (MQ=255)
                                                gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                                     >  1:2433400/1‑100 (MQ=255)
                                                gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                                     >  1:3010535/1‑100 (MQ=255)
                                                 tcgccAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                                     <  1:3633303/95‑1 (MQ=255)
                                                 tCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGc                                                    >  2:1645022/1‑100 (MQ=255)
                                                 tCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGc                                                    <  2:3739039/100‑1 (MQ=255)
                                                   tACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCaa                                                  >  2:2946407/1‑100 (MQ=255)
                                                     cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGt                                                >  1:813305/1‑100 (MQ=255)
                                                     cAGGCTACAAACCTTGCCATTAAAAAGCCCGGATTGCGTGAAGCACCTCCGTGCGTATAACATTCACTCAACCAATCAGTCGCTTTTTGCAATAGc                                                    >  1:2414254/1‑96 (MQ=255)
                                                      aGGTTACAAACCTTACCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGtt                                               <  2:2452135/100‑1 (MQ=255)
                                                        gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                                             <  1:2796375/100‑1 (MQ=255)
                                                        gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                                             <  1:3540419/100‑1 (MQ=255)
                                                          tACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTc                                           <  1:4339155/100‑1 (MQ=255)
                                                            cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                                         >  2:3809324/1‑100 (MQ=255)
                                                            cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                                         >  2:3081074/1‑100 (MQ=255)
                                                            cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                                         >  2:1879919/1‑100 (MQ=255)
                                                            cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                                         >  1:500751/1‑100 (MQ=255)
                                                               aCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATcgc                                      >  2:760719/1‑100 (MQ=255)
                                                               aCCTTGCCACTAAAAAGCCCGGATCGCGCGAGGCGCCTCCGCGCGGTTAACCTTCACTCAACCTCTCAGGCGCTCTGTGCGAGAGCCAGCTCCTCATc                                        >  1:3824190/1‑98 (MQ=255)
                                                                ccTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggcgtttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatca                                     <  2:653316‑M2/100‑65 (MQ=255)
                                                                 cTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGTCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATcgc                                      >  1:454227/1‑98 (MQ=255)
                                                                  ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCggg                                   >  2:4228048/1‑100 (MQ=255)
                                                                  ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCCCCGGGCGTTTAACATTCACTCAACATATCAGGCGCTTTGTGCGAAAGCAAGTCCCTCTTGGCggg                                   <  1:588531/100‑1 (MQ=255)
                                                                   tGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCggg                                   <  2:2028988/99‑1 (MQ=255)
                                                                     ccATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggca                                <  1:1613479‑M2/100‑70 (MQ=255)
                                                                     ccATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggca                                <  2:3317484‑M2/100‑70 (MQ=255)
                                                                       aTTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaac                              <  2:3147518‑M2/100‑72 (MQ=255)
                                                                       aTTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTCTCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCg                              >  1:3792595/1‑100 (MQ=255)
                                                                       aTTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                               >  2:881230/1‑99 (MQ=255)
                                                                        ttAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCg                              >  2:570302/1‑99 (MQ=255)
                                                                        ttAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGa                             <  2:1096689/100‑1 (MQ=255)
                                                                         tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt                            <  2:1256922/100‑1 (MQ=255)
                                                                          aaaaaGCCCGGATCGCGGGCAGCGCCTCCGGGCGTTTAACATTCACTCAACCTCTCAGGCGCTTTGTGCGCGAGCAAGTTCCTCATCGCGGGTTTCGATa                           >  1:418089/1‑100 (MQ=255)
                                                                          aaaaaGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatgaggcaacac                            <  2:2885852‑M2/99‑74 (MQ=255)
                                                                          aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAGCATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt                            >  1:1723291/1‑99 (MQ=255)
                                                                           aaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa                           >  1:1283929/1‑99 (MQ=255)
                                                                           aaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATAc                          >  2:1223123/1‑100 (MQ=255)
                                                                             aaGCCCGTATCGCGTGAAGCGGCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACg                         <  2:4116671/99‑1 (MQ=255)
                                                                              aGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCt                       >  1:2598331/1‑100 (MQ=255)
                                                                               gCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcacgcgtcgcatcaggcaacaccacgta                      <  2:1306656‑M2/100‑80 (MQ=255)
                                                                               GCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTGACATTCACTCAACCTGTCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGc                        >  1:3590701‑M1/1‑98 (MQ=255)
                                                                                CCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcg                     <  2:1714463‑M1/100‑1 (MQ=255)
                                                                                  CGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCACGTTCCTCATCGCGGGTTTCGATACGCccgtc                   <  2:902110‑M1/100‑1 (MQ=255)
                                                                                   GGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcgtcg                  <  2:693103‑M1/100‑1 (MQ=255)
                                                                                     ATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGcc                <  2:2744757‑M1/100‑1 (MQ=255)
                                                                                       cgcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGt              <  1:1870018/100‑1 (MQ=255)
                                                                                       cgcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGt              <  2:4339783/100‑1 (MQ=255)
                                                                                       cgcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGt              <  1:542871/100‑1 (MQ=255)
                                                                                        gcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGtt             >  2:100331/1‑100 (MQ=255)
                                                                                        gcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGtt             >  1:2107616/1‑100 (MQ=255)
                                                                                         cgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTta            <  1:905774/100‑1 (MQ=255)
                                                                                         cgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTta            >  1:4044532/1‑100 (MQ=255)
                                                                                          gggAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTtat           <  1:1199990/100‑1 (MQ=255)
                                                                                            gAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATAc         <  1:1097586/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCCGCG  >  NC_000913/2539589‑2539787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.