New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4637524 =169 (1.070)7 (0.050) 5/162 NT 4.5% coding (829/1425 nt) creC sensory histidine kinase in two‑component regulatory system with CreB or PhoB
?NC_000913 4637555 = 145 (1.010)coding (860/1425 nt) creC sensory histidine kinase in two‑component regulatory system with CreB or PhoB
Rejected: Frequency below cutoff threshold.

Only 100 of 207 total aligned reads displayed.

ACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCG  >  NC_000913/4637456‑4637654
                                                                                                   |                                                                                                   
aCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgcc                                                                                                     >  1:4253579/1‑100 (MQ=255)
aCTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgcc                                                                                                     >  2:2625496/1‑100 (MQ=255)
 tctaccaatgcctgcatacgcgcattttgcgtcagaatgttgtcagtaaaacgagccaccacttccgGCGGCGGAAATTTTACGCGAAGGTccgccgccg                                                                                                    >  1:1435895‑M1/68‑100 (MQ=255)
  ctaccaatgcctgcatacgcgcattttgcgtcagaatgttgtcagtaaaacgagccaccacttccgGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCgg                                                                                                   >  1:2211723‑M1/67‑100 (MQ=255)
      ttGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgt                                                                                               >  2:3601894/1‑100 (MQ=255)
       tGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGAGATTCGTGGAGGGGAGGAAATTTTACGCGAAGGTGCGCCGCGGGAAgtg                                                                                              >  1:2905373/1‑100 (MQ=255)
        gAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGTGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtgg                                                                                             >  2:3436458/1‑100 (MQ=255)
        gAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAgtgg                                                                                             <  2:3228777/100‑1 (MQ=255)
           cAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGtggtgg                                                                                          <  2:4235014/100‑1 (MQ=255)
            aGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATCTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGc                                                                                         <  1:2265991/100‑1 (MQ=255)
             gTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCt                                                                                        <  2:2273554/100‑1 (MQ=255)
                tGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGt                                                                                     >  2:3007748/1‑100 (MQ=255)
                tGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGt                                                                                     >  1:8239/1‑100 (MQ=255)
                   ttACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGtttt                                                                                  <  2:3178253/100‑1 (MQ=255)
                   ttACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGtttt                                                                                  <  1:3311422/100‑1 (MQ=255)
                   ttACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGtttt                                                                                  <  2:1084000/100‑1 (MQ=255)
                    tACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCTTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTa                                                                                 >  1:1770888/1‑100 (MQ=255)
                     aCGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTAc                                                                                <  2:1007831/100‑1 (MQ=255)
                      cccATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACt                                                                               <  1:2665963/98‑1 (MQ=255)
                       gCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTg                                                                              <  2:762762/100‑1 (MQ=255)
                        cATTCACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGa                                                                             >  2:1456779/1‑100 (MQ=255)
                          ttAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGaca                                                                           <  1:1655305/100‑1 (MQ=255)
                          cgatcTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGaca                                                                           <  2:2748332/96‑1 (MQ=255)
                           ttgcgtcagaatgttgtcagtaaaacgggccaccccttccggcggcggaccttcgcgtaaaatttccgccgcCGGAAGTGGTGGCTCGTTttactatca                                                                           >  1:3064213‑M2/73‑95 (MQ=255)
                            aaCTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTg                                                                              <  1:2253505/95‑1 (MQ=255)
                            aaCTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGacaac                                                                         <  2:2399479/100‑1 (MQ=255)
                              cTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACAt                                                                       >  1:532186/1‑100 (MQ=255)
                                   gAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGa                                                                  >  2:3414600/1‑100 (MQ=255)
                                     gCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGa                                                                  <  2:2445274/98‑1 (MQ=255)
                                     gCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACg                                                                >  2:4171879/1‑100 (MQ=255)
                                       tAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCa                                                              <  1:1116017/100‑1 (MQ=255)
                                       tAAAAAGCCCACTGGCGGCGAGTCGTGGAGCGGCGGAAATTTTACGCGCAGGTCCGCCGCCGGGGGTGGTGGCTCGTTTTGCTCACAACATTCTTACGCa                                                              >  1:2011488/1‑100 (MQ=255)
                                       caaacaGCCGGCTGGCGGCGAAAGGTGGGGCGGCGGAAATTTTCCGCGCAGGTCCCCCACCGGAAGTAGTGACGCGCTTTACTGACAACATTCTGACGCa                                                              >  1:363234/2‑100 (MQ=255)
                                        aaaaaGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGCAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCaa                                                             >  2:1805833/1‑100 (MQ=255)
                                        aaaaaGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCaa                                                             >  2:154558/1‑100 (MQ=255)
                                           aaGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAAt                                                          <  2:559478/100‑1 (MQ=255)
                                             gCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTTCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATgc                                                        >  1:2703823/1‑100 (MQ=255)
                                             gCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATg                                                         <  2:223643/99‑1 (MQ=255)
                                              cccACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATgcg                                                       <  2:238876/100‑1 (MQ=255)
                                               ccACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATgcgc                                                      <  1:2534836/100‑1 (MQ=255)
                                                cACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGcgcg                                                     <  2:3909787/100‑1 (MQ=255)
                                                cACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGcgcg                                                     <  1:499717/100‑1 (MQ=255)
                                                 aCTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGt                                                    <  2:185645/100‑1 (MQ=255)
                                                  cTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTa                                                   <  1:237179/100‑1 (MQ=255)
                                                   tGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTAt                                                  <  2:2052076/100‑1 (MQ=255)
                                                    ggcggcGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTaag                                                 >  2:237180/1‑98 (MQ=255)
                                                    ggcggcGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATg                                                 >  2:1915658/1‑100 (MQ=255)
                                                     gcggcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGc                                                <  1:2800086/100‑1 (MQ=255)
                                                      cggcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCa                                               <  1:1217859/100‑1 (MQ=255)
                                                       ggcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAg                                              <  1:4219598/100‑1 (MQ=255)
                                                        gcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAgg                                             <  2:896278/100‑1 (MQ=255)
                                                        gcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAgg                                             <  1:2864490/100‑1 (MQ=255)
                                                        gcgATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAgg                                             >  1:3456061/1‑100 (MQ=255)
                                                          gATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCa                                           <  2:3444250/100‑1 (MQ=255)
                                                          gATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCa                                           <  1:3429073/100‑1 (MQ=255)
                                                          gATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCa                                           <  1:3135576/100‑1 (MQ=255)
                                                          gATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCa                                           >  2:1035135/1‑100 (MQ=255)
                                                            ttCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCAtt                                         <  2:1395726/100‑1 (MQ=255)
                                                            cacttccggcggcggaccttcgcgtaaaatttccgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCAtt                                         >  2:1658340‑M2/40‑100 (MQ=255)
                                                              cGTGGCGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTgg                                       >  2:1989933/1‑100 (MQ=255)
                                                              cGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTgg                                       <  2:1092777/100‑1 (MQ=255)
                                                               gTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGt                                      <  2:2358185/100‑1 (MQ=255)
                                                               gTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGt                                      <  2:4110874/100‑1 (MQ=255)
                                                               gTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGt                                      >  2:3514427/1‑100 (MQ=255)
                                                                  cggcggcggaccttcgcgtaaaatttccgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGa                                   >  1:1442924‑M2/34‑100 (MQ=255)
                                                                   ggcggcggaccttcgcgtaaaatttccgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGaa                                  >  2:1678349‑M2/33‑100 (MQ=255)
                                                                   ggcggcggaccttcgcgtaaaatttccgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGa                                   >  1:392337‑M2/33‑99 (MQ=255)
                                                                   aGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGaa                                  <  1:978056/100‑1 (MQ=255)
                                                                    gccgcggAAATTTTACTCCAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAg                                    <  1:3840472/94‑1 (MQ=255)
                                                                    GCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGaaa                                 >  2:566171‑M1/1‑100 (MQ=255)
                                                                     CGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAAc                                >  2:432410‑M1/1‑100 (MQ=255)
                                                                     CGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAAc                                >  2:1348510‑M1/1‑100 (MQ=255)
                                                                        CGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTCGAAACGtt                             <  2:3403532‑M1/100‑1 (MQ=255)
                                                                        CGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGtt                             <  1:1510485‑M1/100‑1 (MQ=255)
                                                                        CGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGtt                             <  1:1375824‑M1/100‑1 (MQ=255)
                                                                         GGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTa                            <  2:3685193‑M1/100‑1 (MQ=255)
                                                                              ttttACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACg                       >  1:477175/1‑100 (MQ=255)
                                                                               tttACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGc                      >  2:549580/1‑100 (MQ=255)
                                                                                ttACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGcc                     >  2:3755575/1‑100 (MQ=255)
                                                                                  aCGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAg                   <  2:2502381/100‑1 (MQ=255)
                                                                                    gcgAAGGTACGCCGTCGGAAGTGGTGGCTCGTTTTACTGAAAATATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAg                   <  1:2563209/98‑1 (MQ=255)
                                                                                     cgAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCa                >  2:3942781/1‑100 (MQ=255)
                                                                                     cgAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCa                <  2:4214645/100‑1 (MQ=255)
                                                                                     cgAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCa                <  1:1441163/100‑1 (MQ=255)
                                                                                      ggaGGTCCGCCGACGGAAGTGGTGGCTTGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGAATTGGTAGAAACGTAACAACGCCAGGCa                <  1:648041/97‑1 (MQ=255)
                                                                                       aaGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAg              <  1:851312/100‑1 (MQ=255)
                                                                                       aaGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAg              >  1:3285657/1‑100 (MQ=255)
                                                                                           tccgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCCTTGGTAGAAACGTTACTACGCCAGGCAAGACTg          >  2:2888067‑M2/9‑100 (MQ=255)
                                                                                           tccgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTg          <  2:3032560‑M2/92‑1 (MQ=255)
                                                                                             cgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGga        >  1:4111182‑M2/7‑100 (MQ=255)
                                                                                             cgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGga        >  2:2212741‑M2/7‑100 (MQ=255)
                                                                                             cgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGga        <  1:2774821‑M2/94‑1 (MQ=255)
                                                                                             cgccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAAGGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGga        >  1:3040620‑M2/7‑100 (MQ=255)
                                                                                              gccgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGgag       >  2:2122360‑M2/6‑100 (MQ=255)
                                                                                                cgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGaa     >  1:1002614‑M2/4‑100 (MQ=255)
                                                                                                cgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGaa     >  2:796639‑M2/4‑100 (MQ=255)
                                                                                                cgcCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGaa     >  2:2658451‑M2/4‑100 (MQ=255)
                                                                                                   cgGAAGTGGTGGCTCGTTTTACTGACAGCATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCg  <  2:617977/100‑1 (MQ=255)
                                                                                                   cgGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGCAACGTTACTACGCCAGGCAAGACTGGAGAATCg  <  1:2633617/100‑1 (MQ=255)
                                                                                                   cgGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCg  <  2:3304431/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCG  >  NC_000913/4637456‑4637654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.