BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	900753 =	NA (NA)	7 (0.050)	5/164	NT	NA	noncoding (5/87 nt)	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	900783 =	NA (NA)	7 (0.050)	5/164	NT	NA	noncoding (35/87 nt)	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 181 total aligned reads displayed.

ATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGA  >  NC_000913/900684‑900882

ttcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGca                                                                                                      >  1:725392‑M1/70‑100 (MQ=255)

aTGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGca                                                                                                      >  1:1360408/1‑100 (MQ=255)

aTGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGca                                                                                                      <  2:2433931/100‑1 (MQ=255)

 tcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacaccagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                                                     >  1:1408760‑M1/69‑100 (MQ=255)

 tcgccggggggttatgtaggtctgataagacgcaccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                                                     >  2:1913219‑M1/69‑100 (MQ=255)

 tGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                                                     >  1:538808/1‑100 (MQ=255)

   gccggggggttttgtaggtctgataagacgcgccagcggcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAg                                                                                                   >  1:770758‑M1/67‑100 (MQ=255)

    aaTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAgg                                                                                                  >  2:1607450/1‑100 (MQ=255)

     aTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                                                 >  1:1595679/1‑100 (MQ=255)

     aTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                                                 <  2:199945/100‑1 (MQ=255)

      tAAAAAAGACGGACAACTGAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGTTAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                                                 >  1:1535324/1‑99 (MQ=255)

           aaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTg                                                                                           >  2:678676/1‑100 (MQ=255)

            aGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                                                          <  2:2527173/100‑1 (MQ=255)

            aGACGGACAACCCACTAAGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                                                          >  1:1131881/1‑100 (MQ=38)

             gACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCt                                                                                         >  2:3658540/1‑100 (MQ=255)

               cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                                                       >  2:3255109/1‑100 (MQ=255)

                 gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCTGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                     <  2:3038765/100‑1 (MQ=255)

                 gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                     >  2:3367835/1‑100 (MQ=255)

                 gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                     <  2:3636595/100‑1 (MQ=255)

                 gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                     >  2:1406932/1‑100 (MQ=255)

                 gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                     >  1:676782/1‑100 (MQ=255)

                   cAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTc                                                                                   <  2:4284399/100‑1 (MQ=255)

                      cTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGa                                                                                >  2:3490612/1‑100 (MQ=255)

                       ttAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGAt                                                                               >  1:3470670/1‑100 (MQ=255)

                        tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATg                                                                              <  2:2284219/100‑1 (MQ=255)

                        tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCCGATg                                                                              <  1:3942260/100‑1 (MQ=255)

                         aGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                                                             <  1:1111653/100‑1 (MQ=255)

                         aGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                                                             <  2:242077/100‑1 (MQ=255)

                         aGTGGGTGGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                                                             <  1:4173439/100‑1 (MQ=255)

                          gTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGAtaag                                                                            >  2:129954/1‑97 (MQ=255)

                          gTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCg                                                                            >  2:1063467/1‑100 (MQ=255)

                            gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGAc                                                                          <  2:1455271/100‑1 (MQ=255)

                             ggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACg                                                                         >  2:1557540/1‑100 (MQ=255)

                              gTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATTTCTGATGCGACGc                                                                        >  2:3955885/1‑100 (MQ=255)

                               ttGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCt                                                                       >  2:3911453/1‑100 (MQ=255)

                                 gTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTgg                                                                     <  1:2264651/100‑1 (MQ=255)

                                 gTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTgg                                                                     >  1:2103917/1‑100 (MQ=255)

                                  tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                                                    >  2:1992086/1‑100 (MQ=255)

                                  tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                                                    >  2:1230959/1‑100 (MQ=255)

                                   ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                                                   <  2:953795/100‑1 (MQ=255)

                                   ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                                                   <  2:3270272/100‑1 (MQ=255)

                                   ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                                                   >  1:1730622/1‑100 (MQ=255)

                                   ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                                                   <  1:1280155/100‑1 (MQ=255)

                                    cGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcgc                                                                  >  1:3659483/1‑100 (MQ=255)

                                    cGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcgc                                                                  >  1:981832/1‑100 (MQ=255)

                                     gTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                                                 <  1:4315826/100‑1 (MQ=255)

                                     gTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                                                 <  1:3790697/100‑1 (MQ=255)

                                       cTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGGCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTc                                                               <  2:1606518/100‑1 (MQ=255)

                                         tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                                                             >  2:3524130/1‑100 (MQ=255)

                                          cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                                                            <  1:3264902/100‑1 (MQ=255)

                                               taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGa                                                       <  1:3216380/100‑1 (MQ=255)

                                               taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGCCTGATGCGACGCTGGCGCGTCTTATCAGa                                                       >  1:1629502/1‑100 (MQ=255)

                                                aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAc                                                      >  2:2028125/1‑100 (MQ=255)

                                                aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAc                                                      <  2:1526630/100‑1 (MQ=255)

                                                aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTCCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAc                                                      <  1:2344081/100‑1 (MQ=255)

                                                 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGTCGCGTCTTATCAGAcc                                                     <  1:1948308/100‑1 (MQ=255)

                                                 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                     <  2:1377076/100‑1 (MQ=255)

                                                 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                     <  1:860617/100‑1 (MQ=255)

                                                    aTTTATGCACGATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCt                                                    <  1:1714540/98‑1 (MQ=255)

                                                       tATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaa                                               <  2:3484155/100‑1 (MQ=255)

                                                         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑c                                            <  1:1018225/100‑1 (MQ=255)

                                                         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑c                                            <  1:3792322/100‑1 (MQ=255)

                                                          gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑cc                                           >  1:2687158/1‑100 (MQ=255)

                                                           cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑ccc                                          <  1:2585330/100‑1 (MQ=255)

                                                             cTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑ccccc                                        <  1:2629356/100‑1 (MQ=255)

                                                               aTGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCg                                      >  2:4299223/1‑100 (MQ=255)

                                                                 gTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGc                                    >  2:1652457/1‑100 (MQ=255)

                                                                  tAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCg                                   <  1:3201291/100‑1 (MQ=255)

                                                                  tAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCg                                   >  1:4077280/1‑100 (MQ=255)

                                                                   gtgccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGGTGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGa                                  >  1:1408760‑M2/33‑100 (MQ=255)

                                                                   gtgccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGa                                  >  2:3273970‑M2/33‑100 (MQ=255)

                                                                   aGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGa                                  <  1:2831599/100‑1 (MQ=255)

                                                                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGaa                                 >  1:335064/1‑100 (MQ=255)

                                                                     gccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCCGCGaa                                 >  1:3550640‑M2/31‑99 (MQ=255)

                                                                     GCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAAt                                >  1:4313610‑M1/1‑100 (MQ=255)

                                                                        GGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTa                             >  2:2103925‑M1/1‑100 (MQ=255)

                                                                         GATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTAc                            <  1:2012833‑M1/100‑1 (MQ=255)

                                                                           TAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGc                          >  2:1167156‑M1/1‑100 (MQ=255)

                                                                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAg                        <  2:3659505/100‑1 (MQ=255)

                                                                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAg                        >  2:2816869/1‑100 (MQ=255)

                                                                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAg                        >  2:2855759/1‑100 (MQ=255)

                                                                              ggCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGc                       >  2:4094961/1‑100 (MQ=255)

                                                                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCca                     >  1:2858723/1‑100 (MQ=255)

                                                                                  tCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCcaca                   <  2:788069/100‑1 (MQ=255)

                                                                                     ccgcctCATCCGGCACAGGTACCGTGCTGATGTCTGATGCGACGCTGGCGTGTCTTATCAGTCCTACAAAA‑CCCCCCGTCGAATGTACGCAGCCACATTa                <  1:4383103/100‑1 (MQ=38)

                                                                                     ccgccgCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTa                >  2:3545603/1‑100 (MQ=255)

                                                                                     ccgccgCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTa                >  2:1866069/1‑100 (MQ=255)

                                                                                      cgccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTaa               >  2:1590602/1‑100 (MQ=255)

                                                                                       gccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAAt              <  1:2028117/100‑1 (MQ=255)

                                                                                            atccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCCGGCGAATGTACGCAGCCACATTAAtt             >  1:2672853‑M2/8‑97 (MQ=255)

                                                                                            atccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGc         >  1:1791968‑M2/8‑100 (MQ=255)

                                                                                             tccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGcc        >  1:571497‑M2/7‑100 (MQ=255)

                                                                                             tCCGGCACCGGCTCCGTGCTGATGTCTGATGCGACGCTGCCGCGTCTTATCAGACCTACAACA‑CCCCCCGGCGACTGTACGCAGCCACATTAATTTCGcc        <  1:2844373/100‑1 (MQ=38)

                                                                                              ccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg       <  1:3127561‑M2/95‑1 (MQ=255)

                                                                                              ccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg       >  1:4039797‑M2/6‑100 (MQ=255)

                                                                                              ccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg       >  2:3351315‑M2/6‑100 (MQ=255)

                                                                                              ccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg       >  1:2240092‑M2/6‑100 (MQ=255)

                                                                                                  cACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg   <  1:683645‑M2/99‑1 (MQ=255)

                                                                                                  cACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg   <  2:857838‑M2/99‑1 (MQ=255)

                                                                                                  cACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg   >  1:2485467‑M2/2‑100 (MQ=255)

ATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAA‑CCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGA  >  NC_000913/900684‑900882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.