| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4627662 = | 173 (1.160) | 22 (0.150) | 8/170 | NT | 12.0% | coding (348/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| ? | NC_000913 | 4627688 = | 158 (1.110) | coding (374/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
ATACGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4627764‑4627662‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGA > NC_000913/4627688‑4627786 ATACGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGC < 2:868756/100‑1 TACGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCT < 1:1847532/100‑1 TACGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCT > 1:3154523/1‑100 ACGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCTG > 1:1271505/1‑100 CGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCTGC > 1:1753374/1‑100 CGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCTGC > 2:1667402/1‑100 CGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCTGC < 2:1464738/100‑1 CGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCTGC > 1:2358891/1‑100 GCAATAACCAACGCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAG > 1:368224/1‑100 AACCAACGCAGACGATCCGGCACGGTCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCAT > 2:2143046/1‑100 CCAACGCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGG > 1:3295114/1‑100 AACGCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAG > 1:247305/1‑100 AACGCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAG > 1:2885476/1‑100 ACGCAGACTATTCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGC > 2:2053214/1‑100 ACGCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGC > 1:3210154/1‑100 ACGCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATACGCATTCATGCTTTCAATGAAGAGGGCATGGAGC > 2:918841/1‑100 CGCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCC > 1:1775835/1‑100 CGCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCC > 1:530116/1‑100 aCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATACCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG > 2:2153685/2‑100 GCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG > 1:225910/1‑100 GCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG > 2:514000/1‑100 GCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG > 2:1253606/1‑100 GCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG > 1:756270/1‑100 GCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG > 1:3637973/1‑100 GCAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG > 1:3399520/1‑100 nAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGT > 2:3228451/2‑100 CAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGT > 1:246886/1‑100 CAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGT > 2:2363996/1‑100 CAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGT > 2:444283/1‑100 CAGACGATCCGGCACGGTCGGCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCC > 2:2511524/1‑98 CTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGT < 2:2669401/100‑1 TGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTG > 1:437042/1‑100 TGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTG > 1:3125802/1‑100 GCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGG > 1:2210743/1‑100 CGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGA > 1:3439765/1‑100 ATACGGCTCCATGCCCTCTTCGTTGAAAGCATGAATGCGAATATTTTTCTGATATTTAAAAGTTTGCAATAACCAACGCAGACGATCCGGCACGGTCGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4627764‑4627662‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGA > NC_000913/4627688‑4627786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |