New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4627662 =173 (1.160)22 (0.150) 8/170 NT 12.0% coding (348/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 4627688 = 158 (1.110)coding (374/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 224 total aligned reads displayed.

ATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG  >  NC_000913/4627564‑4627761
                                                                                                  |                                                                                                   
ccacacatcccagccgtgcggatacggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGc                                                                                                    >  1:2210743‑M1/99‑100 (MQ=255)
aTCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCCTATCATTATGGGGTTGGACGAGACGCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCgcggc                                                                                                    >  2:358582/1‑100 (MQ=255)
  ccAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGcagcag                                                                                                  >  2:1037208/1‑100 (MQ=255)
  ccAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGcagcag                                                                                                  <  1:2405513/100‑1 (MQ=255)
  acacatcccagccgtgcggatacggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAg                                                                                                  <  2:2669401‑M1/4‑1 (MQ=255)
   cAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCagcagc                                                                                                 >  2:2642756/1‑100 (MQ=255)
   cAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCagcagc                                                                                                 >  1:1558295/1‑100 (MQ=255)
   cAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCagcagc                                                                                                 >  2:364201/1‑100 (MQ=255)
    aGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGcc                                                                                                <  1:4088333/100‑1 (MQ=255)
    aGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGcc                                                                                                >  2:2260652/1‑100 (MQ=255)
    aGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGcc                                                                                                >  2:2771853/1‑100 (MQ=255)
       gcgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGAc                                                                                             <  2:938350/100‑1 (MQ=255)
              tAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCg                                                                                      <  2:17918/100‑1 (MQ=255)
                gCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGa                                                                                    >  2:2804191/1‑100 (MQ=255)
                gCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGAAGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGa                                                                                    >  2:2237873/1‑100 (MQ=255)
                  cAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATc                                                                                  >  1:1680451/1‑100 (MQ=255)
                  cAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATc                                                                                  <  1:3127571/100‑1 (MQ=255)
                    ggTTGACGGGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCg                                                                                 <  2:3365588/99‑1 (MQ=255)
                    ggTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGt                                                                                >  2:3702781/1‑100 (MQ=255)
                    ggTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGt                                                                                >  2:1868293/1‑100 (MQ=255)
                     gTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTc                                                                               >  1:3775985/1‑100 (MQ=255)
                     gTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTc                                                                               <  1:1853949/100‑1 (MQ=255)
                      ttGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCt                                                                              >  1:926032/1‑100 (MQ=255)
                       tGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTg                                                                             <  2:747555/100‑1 (MQ=255)
                       tGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTg                                                                             <  1:870737/100‑1 (MQ=255)
                       acggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTg                                                                             >  1:246886‑M1/76‑100 (MQ=255)
                       acggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTg                                                                             >  2:2363996‑M1/76‑100 (MQ=255)
                        gACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGc                                                                            <  2:3413247/100‑1 (MQ=255)
                        gACGAGCTGCATATCATTATGGGCTTTGACGATACACGTGACCGCGCGTTGTTGGAAGACCGTGCCATGTTGCAGCAACCGACTGTGCCGGATCCTCTg                                                                             >  2:2172053/1‑99 (MQ=255)
                        cggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGc                                                                            >  1:3399520‑M1/75‑100 (MQ=255)
                        cggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGc                                                                            >  1:756270‑M1/75‑100 (MQ=255)
                         aCGAGCTGCATATCATTATGGGTTTTGACGATACTCGTGACCACGCGTTGTTCGAAGACAGTGCCATGTCGAAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                           >  2:455863/1‑100 (MQ=255)
                          gctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGAATAGTCTGCGt                                                                          >  2:2053214‑M1/73‑100 (MQ=255)
                          gctccatgccctcttcattgaaagcatgaatgcgtatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGt                                                                          >  2:918841‑M1/73‑100 (MQ=255)
                           gAGCTGCAGAGCATTATGGGTTTTGACGATACCCGTGACCGAGCGTTGTGCGAAGACTGTGCGATGTCGCAGCAGCCGACCGTGCCGGAGCGTCTGCGtt                                                                         <  2:2144485/100‑1 (MQ=255)
                           ctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGtt                                                                         >  1:2885476‑M1/72‑100 (MQ=255)
                            aGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                        <  1:3026693/100‑1 (MQ=255)
                             gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                       <  1:2338282/100‑1 (MQ=255)
                             gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                       <  1:1375810/100‑1 (MQ=255)
                              cTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                      <  1:1618067/100‑1 (MQ=255)
                              cTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGGGCCGGATCGTCTGCGTTGGt                                                                      <  2:2568315/100‑1 (MQ=255)
                               tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                     <  1:640897/100‑1 (MQ=255)
                                gCATATCATTATGGGGTTTGACGATACCAGTGACCGCGCGTTGTTCGGAGACAGTGCCATGTCGCAGCAGCCGCCCGTGCCGGAACGTCTGCGTTGGTTa                                                                    >  2:736610/1‑100 (MQ=255)
                                   tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                 >  2:153491/1‑100 (MQ=255)
                                   tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGGCTGCGTTGGGTATTg                                                                 >  2:4149084/1‑100 (MQ=255)
                                   taccATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                 <  1:831067/97‑1 (MQ=255)
                                    atCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGc                                                                >  1:3100996/1‑100 (MQ=255)
                                       aTTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaaa                                                             <  2:3961309/100‑1 (MQ=255)
                                        ttATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAAc                                                            <  1:3257791/100‑1 (MQ=255)
                                        ttATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAAc                                                            <  1:317024/100‑1 (MQ=255)
                                           tGGGTTTTGACGATACCCGTGACTGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                         >  2:1923131/1‑100 (MQ=255)
                                           tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACt                                                           <  1:1164635/98‑1 (MQ=255)
                                             ggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                       >  2:1100477/1‑100 (MQ=255)
                                              gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                      >  1:3469174/1‑100 (MQ=255)
                                               ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                     <  2:944427/100‑1 (MQ=255)
                                               ttttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                                                     <  2:351063/100‑1 (MQ=255)
                                                tttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                                                    >  1:1471720/1‑100 (MQ=255)
                                                tttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                                                    <  2:4012910/100‑1 (MQ=255)
                                                tttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                                                    <  2:422566/100‑1 (MQ=255)
                                                  tGACGATACCCGTGACCGCGCGTCGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAatat                                                  >  1:3551418/1‑100 (MQ=255)
                                                    aCGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCa                                                <  1:2801714/100‑1 (MQ=255)
                                                      gATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGa                                              >  2:3053126/1‑100 (MQ=255)
                                                          cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                          <  1:1152371/100‑1 (MQ=255)
                                                          cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                          >  1:3592962/1‑100 (MQ=255)
                                                             gTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAatat                                       <  2:1447602/100‑1 (MQ=255)
                                                               gACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTc                                     >  1:1794410/1‑100 (MQ=255)
                                                                 ccGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGc                                   <  2:556688/100‑1 (MQ=255)
                                                                        ttgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATg                            >  1:3079063/1‑100 (MQ=255)
                                                                         tgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGc                           <  1:516291/100‑1 (MQ=255)
                                                                         tgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGc                           >  1:2031354/1‑100 (MQ=255)
                                                                          gttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCt                          >  1:4195336/1‑100 (MQ=255)
                                                                           ttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCtt                         <  1:3165402/100‑1 (MQ=255)
                                                                              gAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTc                       <  2:4060220/99‑1 (MQ=255)
                                                                              gAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCa                      >  1:231508/1‑100 (MQ=255)
                                                                               aaGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCaa                     <  2:799587/100‑1 (MQ=255)
                                                                               aaGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCaa                     >  1:1094720/1‑100 (MQ=255)
                                                                                 gACAGTGCCATGTCGCAGCAGCCGACCGTGCCTGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACg                   >  1:3976447/1‑100 (MQ=255)
                                                                                 gACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATCTTCGCATTCATGCTTTCAAc                    >  2:1604379/1‑99 (MQ=255)
                                                                                 gACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACg                   <  1:364201/100‑1 (MQ=255)
                                                                                   cAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTGTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGaa                 >  2:467008/1‑100 (MQ=255)
                                                                                    agggCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTAGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAag                <  2:2961167/97‑1 (MQ=255)
                                                                                     gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGa                  >  2:2890268/1‑97 (MQ=255)
                                                                                     gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga               >  1:1231225/1‑100 (MQ=255)
                                                                                     gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga               >  1:2513201/1‑100 (MQ=255)
                                                                                      tGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAagag              <  1:460024/100‑1 (MQ=255)
                                                                                      tGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAagag              >  1:2481690/1‑100 (MQ=255)
                                                                                        ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg            <  1:3458607/100‑1 (MQ=255)
                                                                                        ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg            <  1:991728/100‑1 (MQ=255)
                                                                                        ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg            <  1:3383914/100‑1 (MQ=255)
                                                                                        ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg            <  1:3318071/100‑1 (MQ=255)
                                                                                          aTGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCa          <  1:2642763/100‑1 (MQ=255)
                                                                                           tGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCAt         <  1:1475616/100‑1 (MQ=255)
                                                                                            gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg        >  2:1163889/1‑100 (MQ=255)
                                                                                            gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg        >  2:318736/1‑100 (MQ=255)
                                                                                             tCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATgg       >  2:645440/1‑100 (MQ=255)
                                                                                             tCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATgg       >  1:3851704/1‑100 (MQ=255)
                                                                                             tCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATgg       >  2:4106743/1‑100 (MQ=255)
                                                                                               gcagcaGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGCCGGCATgg       >  2:133169/1‑98 (MQ=255)
                                                                                               gcagcaGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAg     >  2:3265419/1‑100 (MQ=255)
                                                                                                  GCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg  >  1:1753374‑M1/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
ATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCG  >  NC_000913/4627564‑4627761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.